Epinephelus lanceolatus (giant grouper): 117263882
Help
Entry
117263882 CDS
T07331
Symbol
cspg5b
Name
(RefSeq) chondroitin sulfate proteoglycan 5b isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ely00535
]
117263882 (cspg5b)
Proteoglycans [BR:
ely00535
]
Cell surface proteoglycans
Others
117263882 (cspg5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neural_ProG_Cyt
DUF6377
Motif
Other DBs
NCBI-GeneID:
117263882
NCBI-ProteinID:
XP_033493479
LinkDB
All DBs
Position
12:complement(26872256..26890449)
Genome browser
AA seq
677 aa
AA seq
DB search
MARGDRRLGTWQVLLTISMVIIPLAAHGRHSLARHHHHHNQSSVNKEALNSRMVLSDDSA
ERDHLIGLGAKLPLSSTKRHHSRKHAHLDVVDEDPPAGEELTAGGAGPDQPGNPMSDDVI
TVEFHSPAPDIVPSDVAVGWAKAPQPQKQKAGDPTAWTLSDFYDYLSPDDDLSALDSTPE
PEPTPSPPPDMEDENPLLAGSPAVPENTRPKMESGPSLPAPPMPGSDKGKELGLGGAMGT
DGCRLGFVRSGPGTCVSECDIEPNFCFNGGVCTVVAGMGAFCRCNVQDYIWNKGTRCDWA
VTEFQVMCVVVGVASLVLILLFMIIVFFAKRLHHLKNENKRLRKRSKYRPQSSEPQTDGL
SVSTTADGSQPNVRKLCDTPPPAPQAHTHNLAYYDNIICQDDPQKQEDPAKSPQAKEEGS
MNILNSHSPKHENNRPTSVVHDQGHTPNNTEENAEDGVTIGLEVLLPKEAKRHPETSSPL
QYDVFLYKVANNGDSASPSQAPPTHSANSYTSSHPLPKSPKTPRTPKTPKSPKVPKSPKS
PRHTKEHPPSNREPLSVRHSSPGRHPSPGRHPSPSRHPSPSRHSAPGCYSSPTCHPSSHH
SPSRYKCMPTSSTTPPQLRRPRGRSQAPGSEHSGSGREYHSGHMRPSPSSPHLTQPPPSP
SKAKYSPVSTRSLPPLS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcggtgaccgtcgtttgggcacctggcaggtgctactgaccatctcaatggtc
atcatccccctggctgctcacgggaggcattcactggccaggcaccatcatcaccacaac
caatcatctgtcaacaaggaggccttgaacagcaggatggtgctcagtgatgactctgca
gagagggaccacctgattgggctcggggctaaactcccactcagctccaccaaacgtcac
cattctcgtaaacacgcccacctagatgttgtagatgaggacccacctgctggggaggag
ctcactgccggaggggcaggtccagaccagcctggaaatcccatgtccgatgatgtcatc
accgtggagttccacagccctgcaccggatattgtgccctctgatgtcgctgttggatgg
gccaaagccccacaaccccagaagcaaaaagcgggggaccctactgcatggacgctttct
gacttttacgactacctgtcccctgatgacgacctctcggcattagattcgaccccagaa
cctgagcccaccccctcacctccacctgacatggaggacgagaatccgctcctggctggc
tctcctgctgtccccgaaaacacgaggcctaaaatggaaagcgggccctccttgccagct
cctcctatgccagggtcggacaagggtaaagagttaggcttaggtggtgccatggggacc
gacggctgcaggctgggctttgtgcgctctggtcctgggacgtgtgtgtctgagtgtgac
attgaacccaatttctgcttcaatggaggagtgtgtaccgtggtagcaggaatgggagcc
ttctgcaggtgcaacgtgcaggactacatctggaacaaaggcacgcgctgcgattgggcg
gtcacagagttccaggtgatgtgcgtggtggtgggcgtggcctccctggtgctcatcctc
ctcttcatgattatcgtattctttgccaagaggctgcaccacctcaagaatgaaaacaag
cgccttcgcaaacgcagtaagtaccgcccacagagcagcgagccacagacggacggcctc
tccgtttccacaacagccgacggctcgcagccaaatgtaaggaaactgtgcgacacccct
ccgcccgctccccaagctcacactcacaacctggcatactatgacaacattatctgtcag
gatgatccccagaagcaggaggaccctgcaaagtccccacaagccaaggaagaggggtca
atgaacatcctcaactctcattcccccaaacacgagaacaaccgtccaacctctgtcgtc
cacgaccagggccacacccctaacaacacagaggagaacgccgaggatggagtcactatt
ggcctggaggtgctcctccccaaagaagccaagcgccacccagagaccagctcgcccctt
cagtatgacgtcttcctctacaaggttgccaacaatggagactccgcctctcccagccaa
gcccctcccactcacagcgccaactcttacacctcctctcaccccttgcctaaatcaccc
aagacacccaggacgcccaagacacccaagtcacctaaggtgcctaagtcacccaaatca
cccagacacacaaaggaacacccacccagtaaccgtgaacccttgtctgtgagacactcc
tcacctggccgtcacccttcacccggtcgtcacccctcacccagtcgccacccatcaccc
agtcgtcactctgcacctggttgctattcttcccccacctgccatccgtcatctcatcac
tctccctcccggtacaaatgcatgcccacctcctccaccaccccgcctcaattacgcagg
cccagaggtcggtcacaagctcctggctcagagcactcagggagtgggagagagtaccac
agtggacacatgcgtccatccccctcctcccctcacctcacccagcctcctccatcacca
tccaaggcgaagtacagcccggtcagcacccgatccctgccaccactctcatga
DBGET
integrated database retrieval system
