Epinephelus lanceolatus (giant grouper): 117263933
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Entry
117263933 CDS
T07331
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117263933 (vps50)
Membrane trafficking [BR:
ely04131
]
Protein recycling
Others
EARP complex
117263933 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Kgd4-YMR31
Motif
Other DBs
NCBI-GeneID:
117263933
NCBI-ProteinID:
XP_033493563
LinkDB
All DBs
Position
12:complement(31086579..31225411)
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AA seq
965 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELREQPIDPQAEQEIIDSIEEV
YFSNDSFDMVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPSYVKELE
RVTALQTNLQLAAVICTNARRQLSVAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMLSYHRTMQWHEEHDKQETTPAPDD
AAESDESVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVISRL
MQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNIAQ
LHEFKFMGQCRSPSVSPSRQAASSTSPAQEELSLFQQYLQEGNPFEMHAEHKEEETEDVL
ASNGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDVPLKSVSRETIRSKKKSDYNL
NKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNDM
YESSGLGLISSRLRTTLNRIQESLIDMEAVGENAGVHGTGEDRKEKVPSPHLSQLVVLTN
SGTLYGLAQRVVATESLVFLAEQFESLQSHLDTMMPAAKKPFLQQFYSQTVSTASELRKP
IYWIVAAKAIDYEQMLLLMAGVKWDIREIMSQHNVYVDVLLKEFEQFNKRLGDVSRHVRI
PLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDLRPIPD
KEFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKARQKLLAAIDDI
DRPKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctcttatggcccggcagggcctgaaaagcccccaagaaagcatg
gcagacctcagtcctgtggagaacctgaggatcccgagcaaggaggagttgcgggagctg
agggagcagcccatagacccccaggcggagcaggagatcatcgacagcatcgaggaggtc
tacttctctaacgactccttcgacatggttcagcacgaactggagaaactaccacctgag
ctgaacctgcaggagctggaagagtacagagataagctgaagagacaacaagctgcagtt
tctaaaaaggtcgctgatctcattctggagaaacagccctcttatgtcaaggaactggag
cgagtgacggcgttacagaccaacctgcagctggcagcagtcatttgcactaatgcaagg
aggcaactaagtgtggcaaaggagggattcacagaagccagcttggggctattggccaat
cagaggcgtcgacaactgctgacaggcctgctgaagtcactgaggaccatcaagacgctg
caaagaacagatgtaagactcagcgagatgcttgaggaggaagactatccaggtgcaatc
cagctctgtctggaatgtcagaaggctgccagcaccttcaaacactacagctgcatcagc
gaactgaattccaaactacaagacactctggagcaaatagaggagcagctcgatgtcgcc
ctgtcgaagacttgtaagcactttgatgtttcgcactacaccaaggtccagctggcatac
acactcctgggcaagacacagactgctatggaccagctacacatgcacttcacacaggcc
atccacaacacggtgttccaagtggtgctgggatatgtggagctgtgtgccggcaacgct
gataccaagttccagaagatgcagtacaaggacctctgcacgcacatcaccctggacagc
tacatcccctgcctgactgatctatgcaaagcattgtgggaagtgatgctgagctaccac
cgcaccatgcagtggcacgaggagcatgacaaacaggagaccacccccgccccagatgac
gcagcagagtccgatgagtccgtggtggaccgcagctatgtgaagaagaagctggagcat
gggttgacacgcatctggcaggacgtccagttgaaagtgaaggcctacatcctggggaca
gacatgtccaacttcaaatacgacgatttcatagtggtactcgatgtcatcagcaggttg
atgcaggtgggcgaggagttctgcggcagtaagtcagaggtcctgcaggagtctatcaaa
cgccagagtgtcaactattttaaaaactatcacagggcacgactggaagagctgaggatg
tttctggaaaatgagacgtgggaactttgccctgttaagtccaactttaacatcgcccag
ctccatgagtttaagttcatgggtcagtgtcgttctccgtccgtttccccaagcagacag
gcagcctcttcgaccagcccggctcaggaggagctgtctctgttccaacagtaccttcag
gaaggaaacccctttgagatgcacgctgagcacaaagaggaggagacagaggatgtgctg
gcatctaatgggtacgagtcagatgagctggagaagagtgtgtatcaagattacgacagt
gacagtgatgtccccgaggagctaaagcaggactacgttgatgagcagacgggcgatgtc
cccctcaagagcgtgtcccgggagaccataagaagcaagaaaaagtccgactacaacctt
aacaagaccaatgcaccgatcctcaccaacaccaccctcaacgtcatccggcttgtcggg
aagtatatgcagatgatgaacattctgaagcccatcgcctttgatgtcatccactgtgtg
tcacagctctttgactactacctgtatgctgtatacacattctttggacgcaatgacatg
tatgagtcatcgggtctgggccttatcagcagcagactgagaaccacactgaaccggatc
caggagagcctcattgacatggaggcagtgggggagaatgcaggagtccacggcacagga
gaggacaggaaggaaaaggtgcccagcccacatcttagccaactggtggtcctcactaac
agcgggactctttatgggctagcgcagagggttgtggccactgagtctctagtgtttctg
gctgaacagtttgaatccctccagtcccacctggacaccatgatgcctgcagccaagaag
ccctttctgcagcagttttattcacagacggtgtcgacagccagtgaacttcggaaaccc
atctactggattgttgcggccaaggccatcgactatgaacagatgttgctcctgatggct
ggagtgaaatgggacattagggagataatgtcgcagcataatgtatacgtggacgtcctg
ttgaaggagtttgagcaattcaacaagaggctgggggatgtttccagacatgtgcgcatc
ccactgcctgtgtccaacgtcctgtgggagcactgcatccgcctggccaacaggactctt
gtggaaggttatgctaatgtaaagaaatgcagcaatgagggccgggccctgatgcagctg
gatttccaacagttcctcatgaagctggagaagctgactgacctgcggcccatcccggat
aaagagttcgtggagacctacatcaaggcctattacctgacagagaatgacatggagcag
tttatcaagaaccacagggaatactccatgaagcagctcgccaacttggtgaacgtttgt
ttgggttcgcatataaacaagaaggctcgtcagaaactcctggcggccatcgatgacatt
gacagacccaagagatag
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