Epinephelus lanceolatus (giant grouper): 117263959
Help
Entry
117263959 CDS
T07331
Symbol
col28a1a
Name
(RefSeq) collagen, type XXVIII, alpha 1a
KO
K23619
collagen type XXVIII alpha
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ely01002
]
117263959 (col28a1a)
Peptidases and inhibitors [BR:
ely01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
117263959 (col28a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
117263959
NCBI-ProteinID:
XP_033493599
LinkDB
All DBs
Position
12:35460889..35496388
Genome browser
AA seq
1176 aa
AA seq
DB search
MTMRWLLKVLILTLALSSPTRCQNRRRKGQRDDNQVIVSEAKTLICPVEIMFIVDSSEKA
KSLLFERQKDFILRFSTKLMKLHSAGWRLRLRLAALQYSSTVSVEHNFRDWQDLDVFQSR
VASMTFIGHGTYSAYAITNATQIFGRETSSNSLRVALLMTDGTDHPRSPSAVTAAAEAKQ
QNIRVFTIRLSEVPRDGPMNTKLRSIASAPPQQHVLSLADSQLDDKLFNELNTIVRTGCP
QPKTCLCERGERGHPGSPGKPGEPGSDGAPGPKGSRGEPGINGRPGMEGLEGRPGSKGEK
GELGECGVPGKKGEQGAGGPPGPRGTRGEQGSRGVSGDQGPEGTPGSKGDRGLRGAPGPP
GDNGIGFPGPKGDKGNQGRPGPPGPMGMGEPGTLGPAGPPGMQGSPGFPGEGLPGPKGDR
GYEGPKGSRGPPGVGYKGDKGNTGAPGLPGLVGFPGAGVQGEKGDQGPAGPSGPRGPPGL
GIVGQKGDQGFPGEPGPQGERGVGEPGPKGEPGPDGAAGIPGIPGEDGAVGPKGEMGLPG
LRGLEGAPGKGIPGEKGDRGDRGPRGLSGSPGPVGPAGAKGEPGSQGMMGLPGPAGRGLP
GSKGDPGPVGTSGPVGEPGVGIIGPKGNKGNTGPVGPPGVKGEGIPGPQGLPGLPGMQGE
IGPEGKGLPGPKGDRGLPGVPGPSGPPGIGLYGPKGSTGQPGPVGPLGPPGEGIQGPKGE
PGFQGPMGPRGAPGDGLPGEKGDRGIPGDRGKKGDKGDYGEPGSTGKMGRPGEKGEPGLT
KEEVIRIIREICGCGLKCRESPLELVFVIDSSESVGPENFELVKDFVNALIDRVSVSRDA
SRVGVVLYSHVDMVVVSLQQQPSQDYIKAAVRKMPYLGEGTFTGSAIHRANQLFQASRPG
VRKVAVVLTDGQADPRDVMQFEQTATEAHAQGIEMFVIGVGNKTDPLYEAFQAQMDVIAS
DPDEEHVYLIDDFRALPTLEGRILSQICEQVDTMAYLPNSVFPPVEIQPESPDGSRSKEF
PDEENIQVELPVETLTVPTPQSQELGPADKNLVDTKLLVEPWNELPDITFASPGGRGPQG
PGLTSVMGPHTPTDWLYEAESTQAPVSPPPPPLTDSSLPDEGCRQPLDPGPCRQYVVRWY
YDPEANACAQFWYGGCQGNTNNFESEASCRNSCVYT
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgcggtggctcctgaaggttttgatccttactctggccctgtcgagcccaacc
agatgccagaacagaaggaggaaaggacagagagatgataaccaggtcatcgtcagtgag
gccaaaaccctcatctgcccagtggagatcatgttcatcgtggacagctcagaaaaagcc
aaatctctgctgtttgagcgtcagaaggacttcatcctgcgcttcagcaccaagctcatg
aagctccactcggccggctggcgtctgcgtctgcgcctggccgctctgcagtacagcagc
actgtgtcagtggagcacaacttcagagactggcaggacctggacgtcttccagagccgg
gtggcctccatgaccttcatcggccacggcacctactccgcctacgccatcaccaacgcc
acccagatttttggccgagagacgtcctccaacagtctgagggtggcactgttgatgacg
gatgggacggaccacccgcgcagccccagcgctgtgacggctgctgctgaggccaaacag
cagaacatcagggtgttcaccatcaggctgtcggaggtgcccagggacggtcccatgaat
acaaaactgagatccattgccagcgcccccccacagcagcatgtcctcagcctcgccgac
agccagctggatgacaaactcttcaatgaactgaacacaattgtcagaactgggtgccca
cagccaaagacctgtctgtgtgagaggggggagagaggtcaccctggcagcccggggaaa
ccaggcgagccagggtctgatggagctccaggtccaaagggatctcgcggggaacctggc
attaatggacgtccagggatggagggccttgagggtcgacctggcagcaaaggggaaaag
ggagaactgggtgaatgtggtgtccccggtaaaaagggagaacaaggtgcaggtgggcct
cctggccccagaggaaccagaggagagcagggatccaggggagtatctggagaccagggt
ccagaggggacacctggatctaaaggtgaccgaggtctgaggggtgcacctggacctcca
ggagataacggcattgggttccctggtcccaagggtgacaaggggaaccagggaagacca
ggcccccctggaccgatgggtatgggtgaaccagggacactgggtccagcagggccacca
gggatgcaaggatcaccagggtttccaggtgagggtctgccagggcccaagggcgacaga
gggtacgagggtcccaaagggagccgtggacctccaggagtcgggtacaaaggtgataag
gggaacacaggggccccggggctgccgggcttggtggggtttccaggggcaggcgtgcaa
ggagaaaagggggaccaagggccagctgggccctctggacccagaggacctcctggcctg
ggtatagttggacaaaagggtgaccagggtttccccggagagcctggacctcagggcgag
aggggtgttggtgagccaggaccaaagggggagccagggcctgatggagctgctgggata
cctgggattcctggtgaggatggagctgttgggcctaagggagagatgggattgccaggt
ctgcgaggcctagagggagcaccggggaaaggcattcctggagaaaagggcgatagaggc
gaccgtggaccaaggggactatcaggatctcctggccctgttggacctgctggagcgaag
ggagagcctgggagtcaaggaatgatgggcctacctggacctgctgggcgtggcttacca
gggtcaaagggagatcctgggcctgtgggaacatctggacctgttggagaacctggagta
ggaatcatcgggccgaagggtaacaaaggaaacactggacctgttggaccaccaggagtg
aagggagagggcatcccaggcccacaggggctgcctgggttaccaggaatgcaaggagag
atcggacctgaagggaaaggactacctggacctaagggtgacagaggtttgccgggcgtg
ccagggccatcaggtcctcctggaattggactttacggacccaagggctctacagggcag
cctggtccagtaggcccactggggcctccaggagaaggcatccagggaccaaagggagag
cctgggtttcaggggccaatgggccctcggggggcaccaggggacggtcttccaggagag
aagggtgacagaggcattcctggagaccggggaaagaaaggagacaagggagactatgga
gaacctggatctactggaaagatggggagacctggagaaaagggagagccaggactgaca
aaagaagaggtcatcaggattataagagaaatctgtggctgtggtctcaagtgcagagag
agccctctggagctggtgtttgtgatagacagctctgagagtgtagggccagaaaacttt
gagctggtgaaggactttgtgaacgctcttatcgaccgggtgtcagtgagcagagatgcc
agtcgggtcggcgtggtgctctacagccacgtggacatggtcgttgtcagtctgcagcag
cagcccagccaggattacatcaaggccgccgtgaggaagatgccgtaccttggcgagggc
accttcacaggcagcgctatccatcgagccaaccagctgttccaggcgtcgcggcccggt
gtcaggaaagtggctgtggttttaacagacgggcaggccgacccccgtgacgtcatgcag
tttgaacagacagcaacagaggcccacgcgcaggggatcgagatgtttgtaataggcgtc
gggaacaagactgaccctctgtatgaagcgttccaggctcagatggatgtgatcgcctct
gatcctgatgaagagcacgtctacctcatagatgacttcagggcacttcccactctggaa
ggcagaatactgagtcagatttgtgagcaggtcgacacaatggcatatcttccgaactct
gtctttccacctgtggaaatccaacccgagtctccagacgggagccgctccaaagaattc
ccagatgaggaaaacatacaagttgagctcccagtggagacactaacagtcccgacccca
cagtcccaagagttaggtcctgccgacaagaacctggttgacaccaaactgttggtggaa
ccctggaacgagctgccggacatcacatttgcctcccctggtggcagggggccgcagggc
cccgggttgacctctgtgatgggtcctcacactccgaccgactggctgtatgaggctgag
agcactcaggctcctgtcagccctccccctccccccctgacagactcatcactgccagac
gaggggtgccgtcagcctctggacccaggtccctgtcgacagtacgtggtcaggtggtac
tacgaccccgaggccaacgcctgcgcccagttctggtacggaggctgtcagggcaacaca
aacaactttgagtcagaagccagctgccggaattcctgcgtctacacgtaa
DBGET
integrated database retrieval system
