Epinephelus lanceolatus (giant grouper): 117264026
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Entry
117264026 CDS
T07331
Name
(RefSeq) LOW QUALITY PROTEIN: desmoglein-2-like
KO
K07597
desmoglein 2
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117264026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117264026
Cell adhesion molecules [BR:
ely04515
]
Cadherins
Major cadherins
117264026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
Fibulin_C
YniB
PKD_4
Motif
Other DBs
NCBI-GeneID:
117264026
NCBI-ProteinID:
XP_033493709
LinkDB
All DBs
Position
12:complement(27893923..27904766)
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AA seq
1108 aa
AA seq
DB search
MSPPLRCIIFPLLAFLITLVPVGAEGKGTVLQRQKREWITAPRRLVENRDYTGLPSIAKI
RSDKENYTKILYYLTGPGVDQPPQGIFGVDRDTGFVKIFAILDREATPFFHLKGIAKYPD
GTNAEKDLDLKITVLDENDCPPVIKVQQVGSVNESSAAGTVVMRVIATDDDEAGTLHSQI
YYRIAEQSNTAGMFSINSQTGEVLVRQNTLDRERQDTYTLTIIASDLGGQSGGNTGTGEI
TVKILDINDNIPTLEKESYEGSVKENTVNVEVMRIKAIDMDMIYTDNWLAAYEIVSGNEA
RYFTITTDSKTNEGIIMINKALDYEELKTLNLEVAVSNKAAYNFGSRIPSGPIIQKPYPI
KINVLNEKEGPRFQPSVKVVTLSEDHTSVSLHKVIANYAAIDSDTLQTATNVRYAKIKDD
DNWLIIDEKTADIRLKKLPDRESKYLINGTYYAKIICISTETPSKTATGTIAIQVEDFND
HCPELTATTQTMCLEDEVIYVTAVDKDEFPNSTPFEFTVIQGGSKGKWTVEHVNDTTAIL
RDQAKLWPGTYKVAVEVRDQQGKSCADVQIVDVTVCTCDHVTKTCGPRTAKTAQFGASGV
LLMLLGLLLLLLLPLLLLFCLCGGAAAIGDFKAIPFDTKQQLISYHTEGQGEDKEVPLLH
APVDIGGGTLNAKNVNTYGEKGYLGGLTELGGAAGGGAAVGGAINTSTLTAENMHLYNQY
NQSSGQVGMDYVDGGMMAGQEHHFSRXGAGVFDGMALSDHFLGDYYASKSNHAALQSQQK
DGLLVYDYEGQESLAGSVGCCSLLENDNDLAFLNDLGPKFKTLAEICQGSTLVTESVDAG
VSISPPRPVSPVWPSTSTHTHVSTHSETIRDRDHLNINTLNTSNVASQSSAIIQEERITE
RAQGSATLPSVHVQDKIMIPSQTLLIQQPAMYYAATPMYVVEPKPQMVLVAGGTQQAVGQ
VGQVGQVGQVGLSQGLVQVGGLQGSQGVVLVDRQVGMGGVTGQVAQGLSQGTLSRSAQVL
VVENGSSGGAQGVRLAQGLSQGQAGHGSAEQGSKIQTQSFSMASCGSAGSNEDFALTATP
KVQGSQRVVVQRKKVSVTERNIESSTRA
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaccgctgagatgcatcatttttcctctgctggcgttcctcataacgcttgtt
cctgtgggggcagaagggaaagggacagtgctacagaggcagaagagagaatggatcaca
gctcccagacggctggtggagaaccgcgattacaccggcctgccgagtatcgctaaaatc
cgctctgataaggagaactatacaaagatattgtattatctaacgggtcctggtgttgac
cagccccctcaaggaatatttggtgtcgaccgtgacactggctttgtgaaaatctttgcc
attctggacagagaggcgacccccttctttcatttaaaaggtattgcaaaatacccagac
gggacgaacgctgaaaaagatcttgaccttaaaattactgttctggatgagaatgactgc
ccaccggtcattaaagtgcagcaagttggatctgtcaatgaatcgagtgcagcaggtact
gttgtgatgagagtgatagctactgatgatgatgaagcgggcacgctccactcccagatc
tactacagaattgcggagcagagtaacacagctgggatgttctccatcaactctcagact
ggagaggtcctggttcgacagaacactctggatagggagcggcaagatacatatacgttg
actataatagcctcagacctgggcggacaatcaggaggaaacacaggtaccggagaaatt
acggtcaaaattctggacataaatgacaatattccgaccctggaaaaagaatcgtatgaa
ggcagtgtgaaggagaacactgtcaatgtggaggtaatgaggatcaaagccatcgacatg
gatatgatttacactgacaactggctggctgcttatgaaatcgtgtcggggaatgaggcc
agatatttcaccatcactacggattcgaagaccaatgagggaattatcatgatcaacaag
gccttggactatgaggaactaaaaacgctcaacttggaggtggctgtgtccaacaaagca
gcgtacaattttggcagcaggatcccatctgggcccataatccaaaaaccctaccccatt
aaaatcaacgtgctcaatgagaaggaaggcccccgattccagccaagtgtcaaagtggtg
actctctctgaagaccacacttccgtctcccttcacaaagtcatcgccaactatgctgca
attgacagcgacacgctccagacggccaccaacgtaaggtacgctaaaatcaaagatgat
gacaactggttgattattgatgagaagacagcagatatcaggctgaaaaaacttccagac
cgagagtccaagtacttgatcaatggaacgtactatgccaaaattatctgcatcagcact
gagactccctcaaaaaccgccacagggaccatagccattcaggtggaggactttaatgat
cactgtccggaattgaccgctacaactcagaccatgtgcctcgaggatgaagtgatctac
gtcacagccgtagacaaagacgagttccccaattcaacgccatttgagttcacagtgatt
caggggggcagcaaggggaaatggacagttgagcatgtcaatgacaccacggccattctg
agggaccaagccaaattgtggccaggcacgtacaaagtggcagtggaggtcagagaccag
cagggaaagtcatgtgctgatgtccagatagttgacgtaactgtgtgtacttgcgatcac
gtcactaaaacctgtggcccccgcaccgcaaagaccgcacagtttggggcttcaggtgtc
ctgcttatgctcctgggactgctgcttctgctgttgctgcccctcctgctgctcttctgt
ctgtgcggaggtgcagcagctatcggagatttcaaggccataccatttgatacgaaacaa
cagctcatctcatatcacactgaggggcagggagaagacaaggaagttcctcttctgcac
gctccagtggacattggtggtggcacactgaatgccaagaacgtcaacacctatggggaa
aaggggtacctaggaggactgactgaattaggaggcgcagcaggtgggggagcagctgtg
ggaggtgctataaacacttccaccttgacagctgagaacatgcacctgtacaaccaatat
aaccagtccagtgggcaggtggggatggactatgtggatggtgggatgatggcaggacaa
gaacatcatttctcccgataaggggctggggtctttgatgggatggctctatctgaccac
ttcctgggggattattacgcaagtaaatccaaccatgctgcactccaatcccagcagaag
gacggtctgctggtttatgactatgagggtcaggagtccctggcagggtctgtagggtgc
tgcagccttcttgagaatgacaacgaccttgctttcctcaatgacctcgggcctaaattc
aaaacccttgctgagatttgtcaggggtcaaccttggtaacagagtctgtagatgcaggg
gtttctatttctccacccagaccagtgtctcctgtctggccctccacctccacccacaca
catgtcagtactcacagcgaaacgataagggacagggaccacctcaacatcaacaccctg
aacacctccaatgtcgcgtctcagtcctctgccatcattcaggaggagcgaatcaccgag
agagcccagggttcagcaacccttcccagtgtacatgtccaagacaagattatgattccc
agtcagacactgctcatacagcagcccgccatgtactacgctgctacacccatgtatgtc
gtcgagcccaagccccagatggtgcttgttgcagggggcacccagcaggcagttggtcaa
gtaggccaagttggccaagttggccaagttgggttaagtcagggactggtgcaggttggt
ggcctgcaaggctctcagggtgtagtcctcgtagataggcaggtgggaatgggtggtgtg
acagggcaggtagcacaaggcctttcgcaaggaaccctctccaggtctgcacaagtcttg
gtggtggagaatgggtcctcaggtggagcgcaaggtgttcgtctagcccagggccttagc
cagggtcaggcagggcatggctctgcagagcagggctctaagattcagactcagagtttt
tcaatggcttcatgcggttctgcaggttcaaatgaggactttgctctgacagccacaccc
aaagtgcaaggcagccagagagtggttgtgcaacgtaagaaagtctcagtcacagagaga
aatattgaatccagcacaagagcgtag
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