Epinephelus lanceolatus (giant grouper): 117264361
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Entry
117264361 CDS
T07331
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ely04990
]
117264361 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
ely04990
]
Other domain-containing proteins
Patched domain-containing proteins
117264361 (ptchd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
117264361
NCBI-ProteinID:
XP_033494141
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Position
13:34531822..34556571
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AA seq
989 aa
AA seq
DB search
MLGSAPELSGRWERLEPRPRARMLRQVLHAGLRTSFHALGRFVAGHPVFFASAPVLLSIL
LGASFSRYRVEEDVESLLAPKHSLAKIEGNLVDSLFPVNRSKHALYSDLQTPGRYGRVIV
TTRKGSVLDPVHLDTILKLHKRIYQMQVTVPATGVNSFNYSFSYLCLPDDKNVCIIDDII
RAMEEIQSARTSNRSIPNLRYPITQLADGRQAYIGHQLGGVQGWGPSGAVRGPGTGARGE
GVRSARALQLTYYLQARGGLMDRVASQWEKAFCAELQHFAALHPKLGLYPSTSSSLRTDF
QFSSVLARRPLLASLGACGVLAVLCCSMRDCVRSKPWLGLLALLSITLSGLTAAGILNLT
GATYNSTYLGIPFVMLGHGLFGSFEMLSSWRRTREDQHVKERVASVFEDVMLRFSGSTML
HLMTLGLAASPLTNMEAVRLFCRTAALAVTISYVYTLSFYSSCLVFTGYLETGYRHGCFC
RRVPKPDRLDSKPAWYRCLMYTRYQDEAQTTNPPHGVGHSHAHTPNSNLTHTHAHPHPHP
HPPHTVNNPAAHGHSHVANSTHTHPLPHTHSTANTDPHPQDSHLLLGCVRRCYGDWITNT
YVKPFVVLLYLVYISFGLMGFLQVTQGSDPSALVAMDTATVLYTRAQQRYFSSYSPVIGF
YIYESAPYWNASVQRDLLEYAKGFQRISWLEAYLNYLSDRNQSTSQPRENFTHTLRHSFL
REPQFAHFTDDIIFAERGQGEEPDVAASRIFLVAKTTENKREEMSVLLDTLRRLSLTSRV
RFLIFNPSFVYLDRYAAAVSSPLRHSLLAVLFLLGLSSLAVVEPLVSVWLGLTLLSVQFG
VLGFMTLWGVELDCMSVLCLISALGHSADCSGPLLCGFASGRGDSRTRWVRVALERHGVP
SLQTLICYSAALVPVGSVRSNLTRTLFRCLTLTAGCSALHTLAFLPTLLTFLPPSKSRGH
RPDGEGQRQEVECVEMNDSTRVVDQITTV
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcagtgctccggagctttccggtcggtgggagaggctcgagccgcggccgcgc
gctaggatgctgcgccaggtgttgcacgcgggcctgaggacctccttccacgcgcttggc
cggttcgtggcgggccacccggtgttcttcgcctcggcgcccgtgctcctgtccatcttg
ctgggggccagcttcagccggtaccgcgtggaggaggacgtggagagcctgctcgcgccc
aagcacagcctggccaagatagagggcaacctggtggacagcctgttccccgtgaaccgc
tccaagcacgcgctctactccgacctgcaaacgccgggccgctacgggcgcgtgatcgtc
accacccgaaagggcagcgtgctggacccggttcatctggacaccatactaaagctccac
aagcggatctaccagatgcaggtgacggtcccagccacaggcgtcaacagcttcaactac
tccttctcctacctctgtctccctgacgacaagaatgtctgcatcatcgatgacatcatc
cgcgccatggaggagatccagtcagctcgcacctccaaccgctccatcccaaacctgcgg
tacccaattacgcagctggctgatggacggcaggcgtacattggccaccagctaggtggc
gtgcagggctggggtcccagtggtgcggtgcgaggtccggggacaggagccaggggagaa
ggtgtgcgttctgccagggcgttgcagctcacctactacctccaagcccgcggcggcctg
atggaccgggtggccagccaatgggaaaaggccttctgtgctgagttacagcactttgca
gcgttgcaccctaagctggggctgtatccctctacttcctcatctctgaggacagacttt
cagttctcttctgtgctggcacgccgccccctgttggccagcttgggggcgtgtggggtg
ctggctgtcctctgctgctccatgagggactgtgtgaggtctaaaccctggttgggactg
ctggctctgctgtcaatcacactgtcaggcctcactgctgctgggatactcaacctgacc
ggggccacttacaactctacgtacctgggcatccctttcgtcatgcttggtcatgggctc
ttcggctcctttgagatgctgtcatcatggaggcgaacccgggaggaccagcatgtcaaa
gagcgcgtggcgagcgtcttcgaagatgtcatgctgcgtttctccggctccaccatgctc
caccttatgaccctgggcttggctgcctcgcccctcaccaacatggaagctgtccggctt
ttctgccgcaccgccgccttggctgtcaccatcagctatgtttacacgttgtccttctac
agttcctgtctggtgttcactggatacttagagaccggttacagacatggctgcttctgc
cggcgggtccccaaaccagaccggctggactctaaaccggcctggtacaggtgtctcatg
tacactcgctaccaggatgaagctcagacaaccaacccgccacatggggtcggtcacagt
cacgctcacactccaaactctaacctcactcacacacatgctcacccacacccacaccca
caccccccacacacggtgaacaaccctgccgcgcatggacacagccatgtggctaactcc
acacacacacatccacttccacacacacattccacggctaacacagatcctcatcctcag
gactcgcaccttttgctggggtgtgtgaggcgttgctatggagactggatcactaacacc
tatgtcaaaccctttgtcgtcctgctgtatctggtttacatctcctttggactgatgggc
ttcctgcaggtgacccagggttcagaccccagtgcactggttgccatggacacagcgaca
gtattgtatacccgtgcccagcagcgttacttcagctcatattcccctgtcattggattt
tacatctatgaaagcgccccctactggaacgcctcagtgcagcgggacctgctggaatat
gccaaaggcttccagcgaatcagctggctggaagcttacctgaactacctgtcagatcgc
aaccagtccaccagccagccacgggaaaacttcacccacacactccgccactccttcctc
cgcgagccacagtttgcccacttcactgatgacatcatatttgcagagcgcggtcagggc
gaggagccagacgtggcggcttcccgaatcttcttggtggccaagacgacggagaacaag
cgagaggagatgtcagtgctgcttgacaccctgcgacggctgtcactgacctcacgtgtc
cgctttctaatctttaacccttcctttgtctacctggaccgctatgctgcagcggtcagc
tcccccctcagacactcactgctggcggtgcttttcctgttgggtctgtcctcgctggcc
gttgtggagccgctggtctctgtgtggctgggcctcaccctgctctccgtccagttcggg
gtgctgggcttcatgaccttgtggggcgtggagctggactgcatgtctgtgttgtgtctg
atctcagctttggggcactcagcggactgcagcggtcccctcctctgcggtttcgcctcg
ggtcggggtgacagcaggactcgctgggtgagggtggcgctggagagacacggggtgccc
tctctacagacgctcatctgctacagcgccgccttggtgcctgttggctctgtacgctcc
aacctcacacgcacactgttccgctgcctcaccctcacagccggatgctcggccctgcac
acgcttgcgttcttgcccaccctcctcaccttcctgcctccctccaagagccggggacac
cggcctgacggagaggggcagaggcaagaggtggagtgtgttgaaatgaatgacagcact
cgagtggttgaccagatcaccaccgtgtga
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