Epinephelus lanceolatus (giant grouper): 117264655
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Entry
117264655 CDS
T07331
Symbol
pan3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117264655 (pan3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117264655 (pan3)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117264655 (pan3)
mRNA degradation factors
3'-5' decay
Pan complex
117264655 (pan3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH_2
Pkinase
Motif
Other DBs
NCBI-GeneID:
117264655
NCBI-ProteinID:
XP_033494683
LinkDB
All DBs
Position
13:complement(22604970..22635036)
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AA seq
805 aa
AA seq
DB search
MHPSLMISGGGSSGAMNSGLPASAAPLGGAGIPNVKVKFCRYYAKDKTCFYGDECQFLHE
DPSIHVHGGGGSPVPLSMAGGGGTPAGYSLGGSAAACPGGGGTGVSKKSEALGPAGTSLE
GQLLTIPGMEGAALSDANLTNSYFSSSFIGVNGFGSPAESKYSMMQRMTTSSSSPSLLND
GAKNFSHSTHEPVNSPTSSLFSDFGALSISQRRKTPNPAASEFIPKGAPRMATMAQSTVQ
AFPSPLFPHPGLSSSTAAALAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPANYMV
PTTAADQGTHIIQKETVGGTTYFYTDNTPAPMAGMVFPTYHIYPPTAPHVAYMQPKANAP
SFFMADELRQELINRHLITMAQIDHSENPDVPSEVDSYHSLFPLEPLPPPNRMQKTSNFS
YITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMMLVDMWKKIQHSNSVTLREVFTTKAFG
DHSLVFSYDFHAGAETMFSRHFNDPAADSYFTKRKWGQHEPPPPRQHAGLLPESLIWAYI
VQLSSALRTIHTAGLACRVMDPSKILITGKTRLRVNCVGVFDVLTFDNSQTNHLALMPQY
QQADLVSLGKVVLALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLTEQSRLRSV
NDIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTW
SETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVPEKISLVSRDEKSVLV
VTYSDLKRCFDSTFQELQAAASGSL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctagccttatgatcagcggtggcggcagcagcggtgccatgaacagtggactc
ccagcttcagctgctccgcttgggggtgccgggatacctaatgtcaaggtgaagttttgc
cgatattacgcgaaagacaaaacctgcttttatggagacgagtgtcagttcctgcatgag
gatccgtccatccacgtccacggcggcggtggtagccccgtcccgttgtccatggccggg
ggtggcgggacgccagcggggtattccctcggcggctccgcggcggcctgcccgggcggt
gggggaaccggtgtgtccaagaaaagcgaagcattggggcctgcaggcacgtctctggag
gggcagctgttaaccatcccagggatggagggtgcagccttgagcgatgccaatctcacc
aactcttacttcagcagcagctttattggggtcaatgggtttggaagcccagcagagtct
aagtactcaatgatgcagcgaatgactaccagcagcagctctcctagtctcctcaatgat
ggtgccaagaacttcagccacagcactcatgagccagtgaactccccgacatcctcactg
ttcagtgattttggtgctcttagcatttcccaaaggagaaagactcctaacccggcagca
agtgagttcatcccaaagggagctccacgtatggccaccatggctcaatccactgtccag
gccttcccctcgcctcttttcccacatcctggcctcagcagctccacagctgctgcactg
gctcctggcatgtctctgtctgcgggatcttctcctctccactccccaaaaattacaccg
cacacctcacctgctcctcgtcggcgcagtcacaccccaaaccctgccaactacatggtg
cccaccactgcggctgaccagggtactcacataatccagaaggagactgtgggggggacc
acctacttctacacagacaacaccccggcaccgatggctgggatggtgtttcctacctac
catatctatccccccactgcgccccatgtggcttacatgcagccgaaagccaatgccccg
tccttcttcatggctgatgaactccgacaggagttgataaacagacatctgataacgatg
gcccagattgaccactcagagaacccagatgtaccgtctgaggtggacagctaccacagc
ctcttccccctcgagcccctccccccaccaaaccgcatgcagaagaccagcaacttcagc
tacatcacctcctgctacaaggcggtcaacagcaaggatgacctgccttactgcctgagg
aggatacacggtttccgccttgttaacaccaagtgcatgatgctggtggacatgtggaag
aagattcagcattcaaactctgtaacactgagggaggtcttcaccacaaaggcctttgga
gaccactcgttggtgttctcctatgacttccatgcgggtgcagaaaccatgttcagcagg
cacttcaatgacccagcagcagactcgtacttcaccaagaggaagtggggacaacatgaa
cctccccctccacggcagcatgcaggtctgctccctgagtctctgatctgggcttacatt
gtccagctcagctcggccctgcggaccatccacactgccggcctggcctgccgtgtcatg
gaccccagcaagattcttattactggcaagaccaggttacgggtgaactgtgttggggtg
tttgatgtcttaacttttgacaacagtcagaccaatcatcttgccctaatgccacagtac
cagcaagcagacctagtgtcgctgggcaaggtggtgctggcgttggcatgtaactccctg
gctggcattcaaagggagaacctgcagaaggccatggagctggtgtctatcaactactct
tcagacctcaagaacctcattctgtatctgctgactgaacagtctcgcctgcgcagcgtc
aatgacatcatgccgatgataggagcgcgattctacacacagctggatgcatcgcagatg
aggaatgatgtcattgaggaggacctggccaaggaggtgcaaaacggccgtcttttccgc
ctgttggccaaactgggcaccatcaacgagcggccagagtttcagaaggacccgacgtgg
tcggagacgggcgaccgctacctgttgaagcttttccgggatcacctatttcaccaggtg
actgaagctgggacgccctggatcgacctcagccacatcgtctcctgcctcaataaactg
gacgcgggcgttcctgagaagatcagcctggtgtctcgggatgagaaaagcgtcctggtt
gtgacctactcggacctgaagcgctgcttcgacagtaccttccaggagctgcaggctgca
gcctccggctctctgtag
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integrated database retrieval system
