Epinephelus lanceolatus (giant grouper): 117264945
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Entry
117264945 CDS
T07331
Symbol
vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04140
Autophagy - animal
ely04148
Efferocytosis
ely05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117264945 (vps41)
04148 Efferocytosis
117264945 (vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117264945 (vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117264945 (vps41)
Membrane trafficking [BR:
ely04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
117264945 (vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_HPS5
zf_RING_Vps8_fungal
WD40_WDHD1_1st
WD40_Prp19
Vps39_1
Beta-prop_EML_2
TPR_7
zf_RING_Vps8
TPR_19
TPR_PEP5_VPS11
TPR_GEMI5
Beta-prop_IFT140_2nd
zf-Vps39_C
Helicase_PWI
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
117264945
NCBI-ProteinID:
XP_033495171
LinkDB
All DBs
Position
13:complement(27107977..27135901)
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AA seq
854 aa
AA seq
DB search
MAEVEEQGRKQSEEFTDESEEEDSEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHFGKVFLLDIQGNVTQKFEISSVKINQISLDESGEHVGICSEDGKVQVFGLYTREGFH
ENFDCPIKVVALHPQFTRSNYKQFVTGGNKLLLYERNWLSRWKTSVLHEGEGSITNIQWR
ANLIAWANNVGVKIYDISTKQRITNVLRDNVSLRPDMYPCSLCWKDNSTLIVGWGTSIKI
CVVKERNPTEMRDLPSRYVEIVSAFETEFFISGLAPLADQLVTLYFVKENSDHMDEEFRA
RPRLDIIQPLPESCEEISSDALTVRNFQDNECRDYRLEHSEGESLFYIISPKDIVVAKER
DQDDHIDWLLEKKKYEEALMAAEISFKNIKRHDVQKIGMAYINHLVEKGDYDAAARKCQK
VLGKNMELWENEVYRFKTIGQLKAISQYLPRGDLRLRPAIYEMILHEFLKTDYEGFATLI
REWPGELYNNMAIVQAVTDHLKKDPTNRTLLTTLAELYTYDQRYDRALEIYLRLRHKDVY
QLIHKHNLFSSIEDRIVLLMDFDKEKAVDMLLDNEDKISTDRVVEELSDRPELLHVYLHK
LFKRDHHKGQKYHERQIGLYAEYDRPNLLPFLRDSTHCPLEKALEVCQQRNFVEETVFLL
SRMGNCRRALQMIMEELEDVDKAIEFAKEQDDAELWEDLISYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLQKMHRTQM
RGVRVDEENICESCHATILPSDMAKPFNVVVFHCRHMFHKECLPSSGTIPVVQFCNICSA
KKRGPGSGILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtggaggagcagggcagaaaacaaagtgaggaattcacagatgagtctgag
gaggaggacagcgaggaggagcccaagctgaagtatgagaggctctccaatggggtgaca
gaaatcctccagaaggatgcagccagctgtatgaccgtccatgacaagtttcttgcttta
ggtacccattttggaaaagtcttcctgttggacatccaaggaaatgtaactcagaagttt
gaaattagttcagtgaagatcaaccagatcagtctggatgaaagtggagagcatgtgggc
atctgctccgaggatgggaaggttcaagtgtttggtctctatacaagagagggcttccat
gagaactttgactgtcccatcaaagtggtggcattacaccctcagttcaccagatcaaac
tacaaacagtttgtcactgggggcaacaagcttctcctgtatgaaagaaactggttgagt
cgctggaagacatctgttctgcatgaaggcgagggctcaatcacaaacatccagtggaga
gctaacctcatcgcctgggccaacaatgtgggagttaaaatctatgatatcagtacaaaa
cagcggatcacaaacgtgctgcgggataacgtcagtctgaggcctgacatgtacccctgc
agcctgtgttggaaggacaacagcactctcattgtcggctggggtacttccatcaagatc
tgtgttgtgaaagagagaaaccctactgagatgagagatctgcccagccgctacgtggaa
atagtgtctgcatttgagaccgagttcttcatcagtggcctggcacctctggcagatcag
ctcgtcaccctgtatttcgtgaaggagaactctgaccacatggatgaggagtttcgtgca
cggcctcgcctcgacatcatccagcctctccctgagagctgcgaggagatctcctcagac
gcactgaccgtgcgcaacttccaagacaacgagtgccgagactaccgccttgaacattct
gagggagagtcactcttctacatcatcagtcccaaagacatcgtcgtggccaaggagcgg
gaccaggacgaccatatcgattggctgcttgagaagaagaaatatgaggaggcactgatg
gctgcagagatcagcttcaagaacatcaagagacacgacgtccagaaaattgggatggcg
tacatcaatcacttagtggagaaaggagactatgacgctgctgccaggaagtgtcaaaag
gttcttggaaaaaacatggaactatgggaaaatgaagtttacaggttcaagaccattgga
cagttgaaggccatcagtcagtatctgcccagaggagatctgcgtctcagaccggccatc
tatgaaatgatcttgcacgaattcctcaaaactgactatgagggttttgccacactgatc
cgggagtggcctggagagctttataacaacatggccatcgttcaagcagtcactgatcac
ctaaaaaaggaccccaccaacagaaccctgctcaccacgctggctgaactgtacacgtac
gaccagcggtatgacagagccttagaaatctacctgcgactgaggcacaaagatgtttac
cagctgatccacaaacacaacctgttctcctccattgaggacaggatcgtcctcctcatg
gactttgacaaagagaaagctgttgacatgcttctcgacaatgaagacaaaatttcgaca
gacagggtggtggaagaactatcagacaggccggagcttctacatgtgtacctccataaa
ctgttcaagcgggaccaccacaaaggccaaaaataccacgagagacagattggcctgtac
gctgaatatgaccggcccaatctcttacctttcctgagagatagcacgcactgtccgctt
gaaaaggctctggaggtttgtcagcagaggaactttgtagaggagactgtcttcctgctc
agcaggatggggaactgcaggcgggctctgcagatgatcatggaggagctggaggacgtg
gacaaggccatagagtttgccaaagaacaggacgatgcagagctctgggaggatctcatc
tcttactctattgacaaaccaccattcatcactggactccttaataacatcggtactcac
gtggatccgatcctgctcatccatcgcatcaaggagggcatggagatcccaaacctcaga
gattctctagtgaaaatcctccaagactacaatctacagattcttctgagggagggatgt
aagaagatcctggtggcagactccctctctctgctccagaagatgcaccgaacccagatg
agaggagtcagggtcgacgaggagaacatttgtgaatcgtgtcatgctacaatattaccg
tcagacatggccaaacccttcaacgtggtggtgtttcactgcaggcacatgtttcacaag
gaatgtttaccatcctcaggaacaattcctgtggtgcagttttgtaacatctgcagtgcg
aagaagcgtgggccaggaagtggaatcctggaaatgaagaagtaa
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