Epinephelus lanceolatus (giant grouper): 117265082 Help Entry 117265082         CDS       T07331                                  Symbol pkd1l1 Name (RefSeq) polycystin-1-like protein 1   KO K04987   polycystin 1L1 Organism ely  Epinephelus lanceolatus (giant grouper) Brite KEGG Orthology (KO) [BR:ely00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:ely03037]     117265082 (pkd1l1)    04040 Ion channels [BR:ely04040]     117265082 (pkd1l1) Cilium and associated proteins [BR:ely03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    117265082 (pkd1l1) Ion channels [BR:ely04040]  Voltage-gated cation channels   Transient receptor potential channel (TRP)    117265082 (pkd1l1) SSDB OrthologParalogGFIT Motif Pfam:  REJ PKD PKD_channel Polycystin_dom PKD_4 PLAT Motif Other DBs NCBI-GeneID:  117265082 NCBI-ProteinID:  XP_078019104 LinkDB All DBs Position 20:complement(24859327..24959105) Genome browser AA seq 2972 aa AA seqDB search MKPLLVLNLTMNAEYGSTDTEDNDDKNISNNIKTTHQENSTDQGCNDSNHDNNSCDHSLS QNHNNIYCHEGTNSSDTPHFVPLCLLHTSNRSSCHLHLHLYCRLPTAAGQYHLTASLLST SDPSSVLLSAVLPQPLMVYERICALRPSGSWRSAVSAHAEFSLEVVSPASRMGSRVIWTL SLDNVTLTSRTTEEWNMNVSLTTAGCYKVTVKAFNPVSWASFCTHILVQDPVGELLFKVP SVVTRHQKHFVFFSVAAGSNVTVSLLVNATLLYRNSSYTTGEEATAALLFDHTGTVAVEL RAENRVSSQNKSVRVCVEGNRKPSPQVRVSPTWQLPASQSPAHNQADNVWVYAAKQAYPT NTDITLLAVAEVPGPVEFVWHFGDSRSDRTNSRTVTKRYHKPGRYDVFVVMSSGRASLTS DVFPLVVQRAVKLNRLLHQASVLQNQTVTVSCRVNAGTDVTFLWSFGDGSLRLGQSTEQH VFHRTGEFKVEVTVSNLVSSASLSGHIFVVDQPCQPPPVKNMGPLKLQVRRYEVIHLGVT YETEVDCDISGGLYYAWTLFDSAGRIFPLPLIDTHRQSLILPSHLLHYDTYTAVARVQIV GSVVYSNYTVRVQVIPSPPVAFIQGGTNIFINNRNTTMVTLDGQRSYDQDFPMNPVSFSW TCKPVSSITSSCFNHDVPTSSPVLVFPASFLKHNFDQFQFTLTIRSGERSASSETFLTLT SNVIRKVSVYCPQCHGDRVNWDQSFSVSAWCEGCDISPEYIQYTWSLYVVNVSSKPAIEV PFCYTVDLSAPSTIIEGPAASPQTSTLHPPATDASQYIHAVNISTPVSPIESALETRAKT LDLNLTETEPSPVSSLVNTEIAGSGEESFYHPLRETDPRKPLSSSTEYLPLPLDNSGVLY SDHFGRSDIISEFQIDSDSSADWEFSFPFLESSDLGGRLGDYDVPLMSVEEGDPGISAGR PTGVDGESYSPGNDSEFDPASHEDEGSNLVDSRPSVVMQEPIMLDLPRDPVDKGLFESYT YTGISPPLLSFRPLSLKPGSRYMLEVTAKFQDSFLGRTQLFLKTNPAPKGMTCQVQPVKG VELYTHFSIFCTSGKEDLLYEYSVSVGNRPPRMLYQGRDFQYYFSLSSGDPGDDYKVTIY TEIRSSTYGTATKPCPVTVQVQPSFLRDTSSSHLDPDVELSESGLRNLSALVRLGNNMEI RNYISLLSSILNRLSLDTEANTHAQRRTRNVLISTVCELESSEQASMVDNICILKNLLQV TSQVTFFSARRVTGHVQVISKQLSESSAPARFYLDQKTLSTLVSLLSYSLQAAVASNDFT PAMSTSADITQTLKSDPHDEIQDSPSSVYIKRDGSISTKQALQLIADILQTASDLMLKYI LFHEAKEHKVNTGLIALHAMYQSQTSTVISSGSTTFYMPASLIQLLSVHRSRETESRPHQ PCVLSSLTELTHNPYTWVHFPGRLSGPVVDLSLYKCSTRRKIPVRSLVQPINIELQQPPR NKSSVSEYVLLSKQVNYHSFNITQEHLQQAIQLSVVFTPPLNKAFPIMLLFRMFERPTPS TYHLHRIHHWESNTARFTLPPSYLRAPGAGHLALLNAAFGKTPRHKHLSEQVSYSLIVDS SMCLSWDSHQGAWTHHGCRTQRADTTAAVNCSCHQLRPLTVVQQQIQSSHDTTGLDPFLS VSNDLTVLGVLVLCVCLYLPGLVLCRRADVISEANLRVHYLSDNSPSDPYLYAVTVHTGF CSAACMSAKVYIVLNGEDGFSQTRELQVAGCTLFRRNSQDTFILSAAESLGPVWGVHIWH DNSGPSPSWYLKQVRVCEVSRGHAMGRAWLFIGQCWLGVTKGDGRVERSLRVCTQQIGFA KMLRLKLSEYLADHHIWMSVRSCPHPNSFTHTQRLSVCLLLVLGYACVNTVIISQMDDRL PCELGFVDVSAVSVTTGVLSVMSVLPAAAIISHLFRLREVKLTASGVQHAENKTTEKDFF EDTPSVNDSTLQQWSQEAWRRKYQGTDLLSVSNTILENQNRDKEPAIQTDAAIGEGEALP DENLLLTTEGNNTEQAPQGKELHLLSERTQRALLSSMGDGGEAIPEEKDSQGKRKDGSRH WAAWSGNSSFSHISDSLNQRGFRPVSQCCHYLAWTLCLLLSLLCLVLSAMLGMRFSSSKV LLWIHSLFFSLMSCIFLIQPAVIVTVAVTVCFWLRKRADFHSFSSIREFQIGTPKLQSHS GANQTAEQFGTSGFPQERCSYLEKVLGARQRARYLRFVQPPTPAELRKTRGKKRREAFIQ NTLRDLSVCGSMLFLMLCINHGSSFNDHHHLNKAVRQQFIRGHDISFMSIQKHEDWWKWA HTSLINLLYKNTSAEFHILIGEPVLWKTEVSSSFQGQVSSATLVPECLGLFLSGSRTSTH PHSSVLVPMATVPRTCGALGSFLGRSATVGLGHTKSDAASKLKLLHSGGWLGRQTVALKA HFTLFSPAPNLFTSVTMLTEKSPTGALLPSAKVQSVRVYRTPAVWDYVVMVCQLLFLLLS LHQLCDQVYTVAQQGLMGYWRTPCNWLEVSLLTVTLLYYVYYIYHSVIILEVVELLQRHN YRGHVDVSFLATWEQYIRTLRGVMLFLLTVKCVTVVRVNRTMATSATLLTRSLLSLFWPT ISGLILMVALSCMGNLLFVQSSWTFSSLSHSLQTLLRHCRGRRAARGLFPSWHDFLYSGV LCLSSVVWTAMVIGMMSSFIRSAKRSKSRGNVFTIAELAGYIRRRVSEFTGQRRPAWIEN QMEKRTYYFEEFESLVDELLFRLNGLSDSLHHTLPPKAHHYREEESPAISTIHKPCDMDK QDFVRIQMTGEMMVNDHTDVSGHGETLSASHLLRSRRELEILQFLQQRGQDGNHSPSDSV ASDNSQQRGIRARENSRDRELQTYLKAQNYPSLPESASLIKVWTEDVLEKQADQSTKTRD NCWLSKTQATPTEVVVEVLVHEEPGSVEPDQQ NT seq 8919 nt NT seq  +upstreamnt  +downstreamnt atgaaacccctcctcgtcctcaacctcacaatgaatgctgagtatggcagcactgacaca gaggacaatgacgataaaaacatcagtaacaacatcaaaactactcatcaagaaaacagt acagatcagggctgtaatgacagtaaccatgacaacaacagctgtgatcacagtctcagt caaaaccacaataacatctattgtcatgagggcaccaacagctcagataccccccacttt gtccctctttgtctcctccacacctccaaccgctccagctgccatttgcatctccacctt tactgccgcctccccaccgcggcaggacagtatcacctcacagcatctcttctctccact tctgacccttcatcagtgcttctctcggctgtcctgcctcaacccttgatggtgtacgag cgtatatgtgccctgaggccttctgggagttggagatcagcagtttcagcacacgcagaa ttcagcctggaggttgtcagccctgccagccgaatggggtcaagagtgatttggacttta agtttggataatgttactttgacgagcaggacaactgaggagtggaacatgaatgtgtct cttacgacagcaggctgttataaagtgacagttaaggcctttaacccagtcagctgggcc tcattctgcacgcacatcctcgttcaagatccagtcggtgagttgctgtttaaggttccc agtgtggttacaagacatcagaaacactttgttttcttcagcgtcgcagcagggtcaaat gtgaccgtgtctctgctggtgaatgcaacgttgctgtacagaaacagcagctacactaca ggggaggaagcaacggcggctttgcttttcgaccacaccgggacagttgcggttgagctt cgagctgagaatcgagtgtcttctcagaacaaaagcgtgagagtgtgtgttgaggggaac aggaaaccctcaccacaagttagagttagtccaacgtggcaactgcctgccagtcaaagt cctgctcacaaccaggctgacaatgtgtgggtttatgcagcaaagcaagcttatcccaca aataccgatataactttactggctgtggctgaagtaccgggccctgtggagttcgtctgg cattttggagactcgagatcagacagaaccaactcaaggactgtcaccaaaagatatcac aaacctggcaggtatgatgtatttgtagtcatgtcaagtggccgggcctccctgacctcc gatgtgttcccactggtcgtccagagggcggtgaagctcaacaggctgctccaccaggct tctgtcctgcagaaccaaaccgtgacagtgagctgtcgggttaatgcggggactgatgtc accttcctgtggagctttggagatggatcactcaggctgggacagagcacagagcagcat gtcttccacaggacaggagagttcaaagttgaagtgactgtgtctaacctggtcagctct gcctccctgagtggtcacatttttgtcgtggaccagccctgtcagcctccaccagtgaaa aacatggggcctctaaaactacaggtgcgaagatatgaagttatccatctgggggtgacc tatgagactgaagttgactgcgacatttcaggaggactttactacgcctggaccttgttt gactctgcaggacggatcttccctttgcctctcatagacacacacagacagagcctcata ctgcccagccatctcctgcactatgacacctacacagctgtagccagggttcagatcgtt ggcagtgtggtgtacagtaactacactgtgagagtgcaggtcataccgagccctcctgtg gccttcatccagggcggcactaacatcttcattaacaacagaaacaccaccatggtaacc ctggacgggcagaggtcttatgaccaagacttccccatgaaccctgtcagcttcagctgg acatgtaaaccagtaagctccatcaccagctcctgtttcaaccatgacgttcccacttca tcccctgtgctcgtatttcctgctagcttcctaaaacacaactttgaccaattccagttc acgctcaccatccgcagtggtgagcgttcagcttcatcagagaccttcctcacgttaaca tcaaatgtgatcaggaaggtgtcagtttactgccctcagtgccacggagaccgggtgaac tgggatcagtctttctctgtcagcgcctggtgtgaaggctgtgatatttccccagaatac atccagtacacctggagcctgtatgtggtcaacgtatcatccaagcctgccatagaagtc ccattttgttacacagtggatctcagtgctccgtctactatcattgagggccctgctgct tcccctcagacctccaccctacatccacctgctacagatgcttcacagtacatccatgct gtcaatatctctactcctgtctctccgattgagagtgcccttgaaactagagccaaaaca ctagatcttaacttgacagaaaccgagccctcgcctgtctcttctctagtcaacacagaa atagcaggatcaggagaggagtccttttatcaccctctgagggaaactgacccccgaaag cctttgtcctcctccactgaatacctgccacttccccttgacaacagcggcgtcctctat tcagaccactttggccggagtgacattatcagcgaattccaaattgattccgactcctct gctgactgggagttttcttttcctttcctggagagcagtgacttgggaggtcgactagga gattatgatgttcccttgatgagcgtggaggaaggagacccagggatttcagcagggagg cccacaggtgtggatggtgagagctacagtccaggaaatgattcagagtttgatccagca tcacatgaagacgaggggagtaatctggtagattccagaccatctgtcgtgatgcaggag ccaatcatgcttgacttacctcgagacccggtagacaaaggcctttttgagtcctacact tatacaggcatttcaccccctttgctcagctttagaccgttaagtctaaagcctgggagc agatacatgttggaggtcactgccaaatttcaagatagtttcctgggccggactcagcta ttcttaaagaccaaccctgctccaaaaggcatgacgtgccaggtacaaccagtcaaagga gtggagttatatacacacttcagcatcttctgcacctcagggaaagaggacctactgtat gagtacagtgtcagtgtaggaaacagacctcccaggatgctgtatcaggggcgagacttc cagtactacttcagcctatcttctggtgaccccggtgatgactataaagtcacaatttac acagagatcagaagcagcacgtatgggacggccactaaaccctgtcctgtcacagtccaa gtccaaccgagcttcctcagagacacctcttcttctcatcttgatccagacgtggagctt tcagagtcaggtctgaggaacctttcggctctggtgcggcttggaaacaatatggagatt cgtaactacatcagtctgctctccagcatcctgaacagactcagcctggacactgaagcc aacacacatgcacagagacgaacacgcaatgtactcattagcaccgtgtgtgagcttgaa agcagtgaacaggcatcaatggtagataacatctgcattctcaaaaacctgttacaagtt acaagtcaggtgacattttttagtgcaagacgagtgacaggtcatgttcaggtcatctca aagcagctttcagagtccagtgctccagcccggttctatttggaccagaagacactcagc accctagtttccctgctgtcatacagcctgcaagctgctgtcgctagtaatgacttcaca ccagcaatgtccaccagtgctgacattacacagacattaaagtcagacccacatgatgaa atacaggactcacccagcagtgtttacatcaaacgagacggatcgatttcaacaaagcaa gcgttgcagcttatagctgatattctgcagactgcttcagacctgatgctgaagtacatc ttgttccatgaggcaaaggaacacaaagtcaacactggtcttattgccttacacgccatg taccaaagccaaacctccacagtcatcagcagtggctcaaccaccttctacatgcctgcc tccctgatccagcttctatctgttcatcgcagtagagagaccgagagcagaccacatcaa ccgtgtgtgctcagctcgctgactgagctcacccacaacccttacacctgggtccacttt cctggaaggctgagcggaccagtggttgacctgagtctgtacaagtgcagcacgaggagg aagatcccagttcgctcccttgtccagcctataaacatcgagctgcagcaaccaccaaga aacaagagctctgtgagtgagtacgtcctcctaagcaagcaggtcaactaccacagcttc aacattacccaggagcacttgcagcaggccatccagctaagtgtggtgttcacgccaccg ctcaacaaggcatttcccatcatgctgctcttcaggatgtttgagaggccgactcccagt acgtaccacctgcacaggattcaccactgggagagcaacactgcacgcttcaccctgccc ccatcctacctcagagctccaggcgctggtcacctggccctgctgaatgctgctttcggg aaaacacccagacacaagcacctgagtgaacaggtcagctacagtctcatagtggacagc agcatgtgcttgtcctgggacagccaccagggggcctggacacaccacggctgcaggaca cagcgtgcagacacaactgctgcagtcaactgcagttgtcaccagttgaggccactgact gtggtgcagcagcagatccagagcagccatgacactaccggtctggacccgttcctaagt gtgtccaatgatctgacagtactgggtgtactggtgctgtgtgtgtgcctgtacttgccg gggctggtgttgtgtaggagagcggatgtcatttccgaggcaaatctcagagtccattat ctttctgacaactccccgtctgacccatatctctatgctgttacagtccacactggtttc tgctctgctgcttgcatgagtgcaaaggtttacatagtgctcaatggagaagatgggttc tcgcagacaagagaactacaagttgcaggatgcacattattccggaggaactctcaagac acctttatactcagtgcagcagagagcctgggcccagtgtggggggttcacatctggcat gacaactctggaccctccccaagctggtacctcaaacaagtgagggtatgtgaggtgagc agggggcatgcgatgggacgtgcttggctcttcattggtcagtgttggttgggtgtaact aaaggcgatggccgggtggagagatcgctgcgagtttgcactcagcaaataggctttgct aagatgttgcgtctcaagctatctgagtacttggccgaccaccatatctggatgtctgtg cgcagctgtccccatcctaactcattcacacacactcaaagacttagcgtgtgcctgctg cttgtgttgggatatgcatgtgtcaacacagtaatcatatcacagatggatgatcggttg ccatgtgagttgggctttgtggatgtatcagctgtttccgtgacgacgggagtattaagc gtgatgtcagtgttgcctgcagcagcaattatatcacacctcttccgactgcgtgaggtc aaattgacagcgtcaggagtccaacacgcagagaacaaaacgactgagaaggacttcttt gaagataccccttcagtaaatgacagcacacttcagcagtggtcccaagaagcctggagg aggaaataccagggaacagacctgctgtcagtgtccaataccattctggaaaatcaaaac agagataaagaacctgccatccaaacagatgcggccataggagaaggagaggctctacca gatgaaaacttgttgctgaccaccgagggaaacaatactgaacaagcacctcagggaaaa gagttacatctgttaagtgaaagaactcagagagctcttctgtccagtatgggggatgga ggtgaagctattccggaggagaaagattctcaagggaaaaggaaagacggcagccgtcac tgggcagcatggtctggtaacagcagtttctcccacatcagcgacagcctgaatcagaga ggattcagaccagtatctcagtgttgtcactatttggcctggacattgtgtctgctgttg tcccttctctgcctggtgctctccgcgatgctgggaatgaggttcagcagcagcaaggtc ctcctatggatacactctcttttcttctccctgatgtcttgcatcttcctcatccagcca gctgtgatagttacagtggcagtgactgtctgcttctggttgaggaaaagagcagacttt cacagtttctccagtataagagagtttcagatagggacaccaaaactgcagagccacagt ggtgctaatcaaacagcagagcagttcgggacatcaggctttcctcaggaaagatgctca taccttgaaaaggtgcttggagctcgtcagcgagcccggtacctccgttttgtgcagcca ccaactccagcagagctgaggaaaactcgtgggaagaaaagaagagaggctttcatccag aacactctcagggatttgtctgtctgtggctccatgctcttcctgatgctgtgtattaat catggcagctcattcaatgaccatcaccacctcaataaagctgtcagacaacagtttata aggggccatgatatttcatttatgtccatacaaaagcatgaagactggtggaagtgggcg cacaccagtctgattaacttactgtacaagaacacatcagctgagtttcacatcttgatt ggagagccagtcctgtggaagacggaggtgtccagctcatttcagggccaggtctccagt gcgacccttgtgccagaatgtcttggcttattcttgtctgggagcagaacatccactcac ccacactccagtgtcttagttcctatggcaacggtgccaaggacatgtggtgcccttggc agcttccttggacgaagtgctacagttggcttaggccacaccaagtctgacgctgcatcc aaactgaagctcctgcattcagggggctggttgggcagacagacggtggccctgaaggct cacttcaccttgttcagccctgcacccaacttgttcaccagtgtgaccatgctcactgag aagagtcccactggtgcgctgctgccctctgccaaagtccagtcagttagggtgtatcgc actcctgctgtgtgggactatgttgttatggtgtgccagctcctcttccttctcttgtct ctgcatcaactctgtgatcaagtgtacactgtagcgcagcaagggctgatgggatactgg aggacaccctgcaactggctggaagtcagtttgctgacagtaacgttactgtactacgtt tattacatctatcactccgttattatcttggaggttgtggagctgctgcagagacacaac tacagaggacatgttgatgtcagcttcctggctacctgggaacaatatattcgcactctg cgtggcgttatgctcttccttctcaccgtgaagtgtgtgactgtggtgagggtgaacagg accatggccacctctgctacactcctcacccgctcactcttgagcctcttctggccaacg atctcaggtcttatcctgatggtggcgctgtcctgcatggggaatctcctgtttgtacaa agctcctggaccttcagctcactttcccactcccttcagaccctgctccgtcactgccgg ggtcgcagagctgcaaggggcctcttcccctcttggcatgatttcctgtacagtggtgtt ctctgtctgtcctctgtggtatggacagcaatggtcataggcatgatgtcctcattcatc agaagtgccaaaagatcaaaaagcaggggcaacgtcttcaccatagcagaattagccggc tacattagacggagggtctcagagttcactgggcagcgtagaccagcatggattgaaaat caaatggaaaagaggacttactactttgaggagtttgaaagcttagtagatgaactactg ttcagactcaacggcctctcagacagtctgcaccacactctccctcccaaagcccatcac tacagagaggaggaaagtcctgccatctcaaccatacacaagccctgcgacatggacaaa caggactttgtgagaatacaaatgacaggagagatgatggtgaatgatcacactgatgtc agcggccatggagaaaccctctctgcatctcacctgctcaggtccaggcgtgaactggag atcctgcagttcctgcagcagagaggtcaagatgggaaccattctccctcagacagtgtg gcatcagataattcacaacaacgtggaataagagccagagaaaattcaagagaccgagag ctccaaacttatttaaaggcgcaaaactacccatccctcccagagtcagcatcactcatt aaggtttggacagaagatgttctggagaaacaagctgaccagtcgactaaaacacgtgac aattgttggttaagtaaaactcaggccacacctacagaggtggtggtggaagttctggtc catgaagagcctgggagtgtggagccagatcaacagtag

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