Epinephelus lanceolatus (giant grouper): 117265209
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Entry
117265209 CDS
T07331
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117265209 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ely03041
]
117265209 (prpf3)
Spliceosome [BR:
ely03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117265209 (prpf3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
DUF4011
TPX2
Motif
Other DBs
NCBI-GeneID:
117265209
NCBI-ProteinID:
XP_033495464
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All DBs
Position
14:13937490..13950790
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AA seq
703 aa
AA seq
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MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTIDQLRPFLDDSAG
GFVERLFEALEESRNARGNKGAGEKNRKRELKDVFGDEAETGAMREAPETGDGTVAKRKR
VPRFEEVEEPEVIPGPPSESPGMLTKMQIKQMMEAATKQIEERKKQLSFASSVPASQSQL
ESPPVSRLLGTSAAAAAGGASSIAPSQAASFMNDAIEKARKAAELQARIQSQLAMKPGIL
GALGNTGPHNIVALANLHAMGIAPPKVEVKEVNKPTPLILDDKGRTVDASGKEVELTHRM
PTLKANIRAVKREQFRQQLKEKPGEDLESTSYFDQRVFITPAQRPRRAFKFHDQGRFEKI
AQRIRTKAQLERLQNEIAQAAKKTGIQASTKLALIAPKKELGEGEVPHMEWWDSYILANN
MDISSKTDFDNVELFGVTNLVEHPAQMSPPVDTDKPVTLGVYLTKKEQKKLRRQTRREGQ
KELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAA
RKLTAEQRKEKKVKKLKEDLTDGVHIAVYRIRNLQNPAKKFKVEANANQLYLTGTVVLHK
DVNLVVVEGGPKSQKKFKRLMLHRIKWEEHNSKRDDPDGDDDTKRNNKCWLIWNGTAKER
SFGEMKFKQCPTENMAREHFKKHGTEHYWDLALSQSVLDSTDD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttccaaaacgggaggtggaggagctgaggccatgggtggagcgcactgtgaag
aaggtgctgggtttctcggagcccacagtggttactgctgctttgcactgtgttggaaag
ggattggacaaaaggaagaccatagaccagctgcgtcccttcctcgatgactctgctgga
ggttttgtggagcgtctttttgaagctttggaggaaagccgcaatgcacgtggcaacaaa
ggagcaggagaaaagaaccgcaagagagaactcaaggatgtgtttggtgatgaggctgaa
acgggtgcgatgcgagaagctccagagacaggagatgggacagttgcaaagaggaaaagg
gtgcctcgcttcgaggaggtggaggagcctgaggtcatacctggacctccatctgagagc
cctggcatgctcaccaaaatgcagataaaacagatgatggaagcagctaccaaacagata
gaagagaggaagaagcagctgagctttgcctcttcagtccctgcctcacagtcacagctg
gaatcccctccagtttcacggcttcttggcacatccgctgctgcagctgcgggtggtgcc
tcatctatcgccccctcccaggctgccagcttcatgaacgatgctattgagaaggcccgc
aaggctgccgagctccaggcccgcatccagtcccaattagccatgaagcctggcatcctc
ggagccctgggaaacaccgggcctcacaacatagtggcactagctaatctacacgctatg
ggaattgccccaccgaaagtagaagtcaaagaggtgaacaagccaacacctctcattctg
gatgacaagggaagaactgtggacgctagtggcaaagaggttgaactcacacaccgcatg
cccacactcaaagcaaacattcgagcggtaaagagggagcagttccgtcagcagctgaag
gagaagcctggggaggacttggagtccacgtcttactttgaccagcgggtgtttattaca
ccggctcagcgccctcgccgggccttcaaattccacgaccaggggcggttcgagaagatt
gctcagagaatcagaaccaaggcccagctggagagattgcagaatgagatcgcccaggca
gcaaagaagacaggaatccaagcatccaccaagctggcactgattgccccgaagaaagag
ctgggagaaggggaggttccccacatggagtggtgggactcctacatcctggccaacaac
atggacatatcatccaaaacagactttgacaatgtggagttgtttggtgtgaccaacctg
gttgaacatcctgcccaaatgagccctccagttgatacagataagcccgtgacgctgggt
gtatacctgacaaagaaagaacagaagaaactgaggagacagacacgaagagagggacaa
aaagaacttcaggagaaggttcgtttgggattgatgccgccaccagaacccaaagtacgc
atctccaatttgatgagagtgctggggacggaggcggttcaggacccgacaaaggtggag
gctcatgttagagcacagatggccaagagacagaaagctcacgaggaggccaacgcagcc
cgcaagctcacagcagagcagaggaaagagaagaaggtcaagaagttaaaagaagacctc
actgatggcgttcatatcgcagtatacaggatccgtaacctgcaaaatcctgctaagaag
tttaaagtggaagccaatgccaaccagctgtacctgacaggcacagtagttttgcacaaa
gacgtcaaccttgttgtggtggagggaggccctaaatcccagaaaaagttcaagaggctg
atgttacacagaatcaaatgggaggagcacaacagtaaaagagatgatccagatggtgat
gacgacacaaagaggaacaacaagtgctggttgatttggaacggcacagccaaagagcgc
agttttggggagatgaagttcaagcagtgcccgacagagaacatggccagagaacacttt
aagaaacacggcacagaacactactgggatctagcgctcagccagagtgtgttggacagc
acagacgactga
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