Epinephelus lanceolatus (giant grouper): 117265299
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Entry
117265299 CDS
T07331
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04621
NOD-like receptor signaling pathway
ely05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117265299 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117265299 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ely04054
]
117265299 (nod1)
Pattern recognition receptors [BR:
ely04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117265299 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
LRR_6
NOD2_WH
LRR_4
AAA_16
AAA_22
NPHP3_N
Roc
ABC_tran
ATPase_2
RsgA_GTPase
PIF1
Motif
Other DBs
NCBI-GeneID:
117265299
NCBI-ProteinID:
XP_033495605
LinkDB
All DBs
Position
14:37739058..37753610
Genome browser
AA seq
952 aa
AA seq
DB search
MVWTQHNGSAVNMGQREEDKVCCLNILTYHRELLVSRLRSIQCILDNLLACGFICEEDVE
IIQRTATKTDQVRKILELVQCKGEEACEFFIYIIYKVCDAYKDLQPWLKEINYNPSSDVT
LITVVNTDPISRYCEKLKHEMSRDTCFIMSYGQREETRLEDLYTDTLMELLNDCNESLGF
LESLDQLLGDHAVFNPQGEIIYVMGDAGVGKSILLQKLQNLWSKKELQTDAIFFFKFRCR
MFSILKETEQISLRDLLFKYNCYPDLDPDNEVFDYILCFPEKVLFTFDGYDELQMNDLMN
VPEVVSPDVKAHPFQLLISLLSGKLLKGSQKVLTARTGTEIQSRVIRKKVVLRGFSPAHL
KTYIDLHFKEQEHRELVSVQLDASPHLCGLCSTPLFCWIVFKSFRHLHTMHDSFHLPETC
ITLTDIFLLLSEVFLTRSASPAPSLLKKSTRCASETFKAGLRPLAAFAKLALQGMESGSF
ICTQEEITACGLTEEDLTLGFLRPVSEYDANGSPATFEVLHITLQSFLAAFALVLDEQAA
ASSILKFFTECSRKREVSCLPFNVCVRGSSKPSEKKPFTSNEHLQFTNLFLCGLLSKANT
GLIQHLVSPVVLKKKQTLLKSYLSTSVKSHLHGLPHYNSEDGKKVHVLPNFLWMLRCIFE
TGSKDIAQMTAKGITANLIKLGYCDVYSGDCTALNFVLQHRQKLLGVDMDNNNISDYGVK
QLKPSFSKMTVVRLSVNRLSDSSIEVLAEELCKHKIVEMLGLYNNEITDAGAKLVARIIE
ECPKLRTVKIGKNKITSVGGRYLASAIQKSTSIFDVGMWGNSIGDEGAEAFAEALKQHPR
LTNLSLSANGITSKGGKCLAEALKENSVLRIFWLVQNELTDDAAPHLAELIQANTGLLHL
WLISNQFTVGGIKQLAEALTHNTALKEICVKGNQLSEEEENQFVEEKRLRFH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggacgcaacacaatggttctgcagtaaatatgggtcagagagaagaagacaag
gtgtgctgtcttaacattctcacctaccacagagagctgctggtgtcgaggctgaggagc
attcagtgcatcctggacaacctgttggcctgcggcttcatatgtgaagaggatgttgag
atcatacagcgaactgccaccaagacggatcaggtgcgcaaaatcttggagctggtccaa
tgcaaaggcgaggaggcctgtgaattcttcatttacatcatatataaagtatgtgatgcc
tacaaagacctgcagccatggttgaaagagataaactacaacccaagcagtgatgtaacg
ctgataacagtggttaacacagatcccatcagcaggtattgtgagaagttgaagcatgag
atgagccgggacacctgcttcatcatgtcatacggccagcgagaggagaccaggctagag
gacctttacactgacacactgatggaactgttgaatgactgcaatgaaagtctgggcttc
ttagagagtctggaccagctcctgggagaccatgcagtcttcaatccccaaggtgaaatc
atctatgttatgggggatgccggtgtgggaaaatcaatcctcctgcagaagcttcagaac
ctctggtccaaaaaggagctgcagacggatgccatcttcttttttaagttccgctgtagg
atgttcagcatcctcaaagaaacagagcagatctcccttagagaccttctgttcaaatat
aactgctacccagatcttgatccagataatgaggtgtttgattacatcctgtgcttccct
gagaaggttctttttacatttgatggctacgatgagcttcagatgaatgatctgatgaat
gttcctgaagtggtgtcaccagatgtgaaggcacaccccttccagctgctcatcagtttg
ctcagtgggaagctactcaagggctcccagaaggtgctgacggcccggacagggactgag
atccagagtagggtgatcagaaagaaggtggttctgcggggattctccccagctcatctc
aagacctacattgatctgcactttaaggagcaggagcacagagagctggtttcagttcag
ctggatgctagcccccacctgtgtggcctctgctccaccccactgttctgctggattgta
tttaagagctttaggcacctgcacaccatgcatgatagtttccatctgcctgaaacgtgc
atcacactgacagacatcttcctgctgctgtcggaggtgttcctcacccgctcagcctca
cctgcgccgtctctgctgaagaaaagcacccgatgtgcctctgagacattcaaagcaggg
ctcaggcctcttgcagcatttgccaaactagcacttcagggtatggagagcggtagcttc
atttgcacccaagaggagatcactgcatgtggcctgacggaggaggacctgacgctgggc
tttctaagacctgtcagtgagtatgatgccaatggaagccctgctacatttgaagtcctc
catatcaccctccagtctttcctggcagcatttgctctagtgttggatgagcaggctgct
gccagctccatcctcaagttcttcacagagtgcagcaggaaaagagaagtctcctgtctg
ccgtttaacgtctgtgtccgtggctcctcaaagcccagtgagaagaagccattcacatcc
aatgagcaccttcagttcactaatctgtttctgtgtggactgctgtccaaggctaacact
ggcctgattcaacatctggtatctcctgtggtactaaagaaaaaacagaccctgctaaaa
tcctacctgtccaccagtgtgaagtcccacctccacggcttaccccactacaacagtgaa
gacggcaagaaagttcatgttttgcccaacttcttgtggatgctgaggtgcatttttgag
acagggagcaaagacatcgctcagatgacagcaaaaggcatcacagcgaacctcatcaag
ctgggttactgcgacgtgtactcaggtgactgcaccgccctgaactttgtactgcagcac
cgtcagaagctcctgggcgttgacatggacaacaacaacatcagtgactacggggtgaag
cagctgaagccctccttttctaagatgacagtagtgagattgagcgtcaatcgcctgtct
gacagcagcatcgaggttcttgcagaggaactgtgtaagcacaaaattgtggagatgttg
gggctttacaacaacgaaatcacagatgccggagccaaactagttgctcggataattgag
gaatgcccaaagctgcgaactgtcaagattggtaaaaacaagatcaccagtgttggtggg
aggtatttggccagcgccattcagaagagcacttccatatttgatgttggaatgtggggg
aacagcatcggcgatgagggagcagaggcctttgcagaagctctgaaacagcatccacgg
ctcaccaacctcagtctctcagccaatggcatcacatctaaaggtgggaagtgcctggca
gaagcactgaaagagaacagcgtcctcaggatattctggttggtgcagaatgagctgact
gatgacgcagctcctcacttggctgagttgatccaagcgaacacgggtctactccacctc
tggttaatcagcaaccagttcactgtgggtgggatcaaacagcttgctgaggccctaact
cacaacacagcactcaaagagatatgcgtgaaaggaaaccagctctctgaggaggaagag
aatcagtttgtggaagagaaaaggctgcggttccactga
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