Epinephelus lanceolatus (giant grouper): 117265325
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Entry
117265325 CDS
T07331
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha B isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117265325 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ely03310
]
117265325 (rorc)
Transcription factors [BR:
ely03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117265325 (rorc)
Nuclear receptors [BR:
ely03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
117265325 (rorc)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117265325
NCBI-ProteinID:
XP_033495649
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Position
14:12692316..12719686
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AA seq
505 aa
AA seq
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MEYEEPDVPPADSPIKRGGAVSKKTHLTQIEVIPCKICGDKSSGVHYGVITCEGCKGFFR
RSQLPTVSYSCSRQNNCQIDRASRNRCQHCRLQKCLAQGMSRDAVKFGRMSKRQRDSLIA
EVERHRQQQQQQQQLQGDAQSLLSFPSKARQDRSPQLLQPMAAAYSFNGDTELLSYTAEV
HPYLVCSPSESQVSGMIYRGSGVSPTSRSQGRGDNSGHPDIRGFDSRQPSHDLVAIHPCN
PLEDPYSLYPHSLRNIDELCASIVRSHRETSQYRVEELQALRWKLLSRDEIQAYQSKSVD
EMWQHCAIRLTDAVQYVVEFAKHIPGFRMLSQNDQIALLKTGSMEVVLVRMSRYFNTENN
TVFFDGKFAGAEVFKSLACGDLIAAVFDFAHGMCALKLTEQQIALFSALVLINTDRPCLE
DRGRVQRVQRSVEFGLTHILHRDNQESLMHKLYQRMAVLRSLCSLHMEKLHWFSQRYPLT
AHSLFPPLYKELFASEAELLPGTTH
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgaggagcccgacgtgccccccgctgacagccccatcaaaagaggaggagcc
gtgtccaagaagactcatctgacccagattgaagttatcccatgtaagatctgcggtgat
aagtcctctggagtgcattatggagtcatcacttgtgagggctgcaagggattttttcgg
cgcagccagctgcctactgtatcgtactcctgctccaggcagaacaactgtcagattgat
cgggccagccgcaaccgctgccagcactgccgtctgcagaagtgcttagcacagggcatg
agcagagatgctgtgaagtttggacggatgtccaaacgtcaacgggactctctgatcgct
gaagtggagaggcaccgacaacagcagcagcagcagcagcagcttcagggagacgcccag
tctctcttgtccttccccagcaaagcccgtcaggaccgctccccacagctccttcagccc
atggccgcagcctactccttcaacggggacactgagctgctgtcctacaccgctgaagtt
cacccttacttggtgtgctccccgagcgagtcgcaggtgtcgggaatgatctacagaggc
tctggtgtgtctcccacatcgagatcccaggggagaggggacaacagtggacaccctgac
ataagaggctttgactccagacagccatctcatgacctggtggcgattcatccctgcaac
cctctggaggatccgtacagcctctaccctcactctctgagaaacatagatgagctgtgt
gccagcattgtgcgctcccacagagagaccagccagtacagagtggaggagctgcaggct
ctcagatggaaactgctcagcagagatgagatccaagcctaccagagcaaatcggtggac
gagatgtggcagcactgcgccatccgactgaccgatgctgtgcagtatgtggtggagttt
gcaaaacacatcccaggcttccgtatgctgagccagaacgaccagattgctctcctgaag
actggctccatggaagtggttctggtcagaatgagccgctacttcaacacggagaacaac
accgtcttcttcgatggcaaattcgccggtgctgaagtcttcaagtctttggcatgtgga
gatttaattgcagcagtgtttgactttgctcacggtatgtgtgctctaaagctgactgag
cagcagattgctctcttcagcgctctggtgctgatcaacacagatcgtccatgtctggag
gacagaggcagagttcagcgagtgcaaaggagcgttgagtttggactcacacacattcta
caccgagacaaccaagaaagtctaatgcacaagttgtaccagaggatggcagtgttgcgt
tcactgtgcagtctgcacatggagaagctgcactggttcagtcagcgttatccactcacc
gctcactctctgttccctccactctacaaggagctgttcgcctctgaggcagagctgctg
ccagggaccactcactga
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