Epinephelus lanceolatus (giant grouper): 117265369
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Entry
117265369 CDS
T07331
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03013
Nucleocytoplasmic transport
ely03015
mRNA surveillance pathway
ely03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117265369 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
117265369 (rbm8a)
03015 mRNA surveillance pathway
117265369 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117265369 (rbm8a)
03041 Spliceosome [BR:
ely03041
]
117265369 (rbm8a)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117265369 (rbm8a)
Spliceosome [BR:
ely03041
]
Complex C
Other components
EJC/TREX
117265369 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
117265369
NCBI-ProteinID:
XP_033495710
LinkDB
All DBs
Position
14:9453906..9461475
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AA seq
176 aa
AA seq
DB search
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRIKDDAYDTVEQ
DGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALV
EYETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGPPKNKRRTGGRRRSRSPDRRRR
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgttggaccttcatgaagcgggaggcgaggactttcctatggatgaggat
ggtgacgagagcatccacaagctgaaggagaaagccaagaagaggaaaggacgaggcttt
ggttcagaggaaggagccaggtccagaatcaaagatgatgcctatgatactgtggagcag
gacggggacgagccaggccctcagagatctgtggagggctggatcctgtttgtgaccggt
gtacatgaagaggccacagaggaagacatccatgacaagttttcagagtttggagaaatt
aagaacctgcatctcaaccttgaccgcagaacaggctacctcaagggatatgcactggtg
gagtatgagacatacaaagaggcccaggcagccatggaagggctcaatggtcaggacatg
atgggtcagcctatcagtgttgactggggatttgtcagagggcctcccaagaacaagagg
aggactggtggacgaagacgcagcagaagtccagacaggaggcggcgttga
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