Epinephelus lanceolatus (giant grouper): 117265377
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Entry
117265377 CDS
T07331
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117265377 (prdm1a)
Transcription factors [BR:
ely03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117265377 (prdm1a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
117265377
NCBI-ProteinID:
XP_033495718
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Position
14:1546399..1561931
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AA seq
843 aa
AA seq
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MCGWDQSYTATSHSSAMLTSEGAHTMEQDDTHHGAKMASTATNSTDSDRAETTADTDVDM
ETETEMEEADMSQWTEAEFEEKCTYIVKDTAWEAGPDSDAVTTTRAEASLPRNLAFKHPA
DSKEVVGVCSREYIPKGTRFGPLVGEIYTADSVRKDANRKYFWRIYEGQEFHHFVDGLDE
TRSNWMRYVNPAHSAAEQNLAACQNGMEIYFYTVKPVPAGAELLVWYCHDFARRLHYPPS
GELMMQKLKQSLLEVKQQQVSSEERLVEASSLSPIAVTPTPPKREHSVLSILRGTNSTSS
SSTKREPSRPLPTRPRCADSPERPLYPRALYPTLRPHPHIPEDFLGHKPGQLVYPTTRSP
GNQSSATPSPSARSSPDSSPQGSPLGPASFYPTGLGSYPGYSPPSTPISSSFYPPGAPYS
RYLLPHPYPLPSGGVPTVGGIFPRMYPVYSSLLPPHVPLLPSDTAGRRFLMPDHIQPSSV
SAHRDFLLPRPTSAFSAATSLKDKAGPHHPYPAHPHPHRPTHAPSSGSPTAGTAPPNERV
PTKPTSALLGNASEHCTDEEAINLTKAKRGPGSAGYKALPYPLKKQNGKIKYECNVCSKT
FGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHFLVHTGEKPHECQVCHKRFSST
SNLKTHLRLHSGEKPYHCKLCPAKFTQFVHLKLHKRLHSRERPHKCPHCHRHYIHLCSLR
LHLKGYCPAVSTHSSLEDVHRANEEIERFDVSEHAERLEQLQGGVEVEAMLEKQVLGMLW
RENDLKSPHYHPHHKGGATDLISAGYGTYESPNETSVIKMRHSSPIPPLPANVTVKQESE
DHA
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggatgggaccaaagttacacggcgacctctcatagctcggccatgttgaccagt
gagggggcgcacaccatggagcaggacgacacacatcacggagccaagatggcttccact
gccaccaacagcaccgactcagacagagcagagacaacggcagacacggacgtggacatg
gagacagagacggagatggaggaggcagacatgagccagtggacggaggcagagttcgag
gagaagtgcacgtacatcgtcaaagacacggcgtgggaggcggggccagacagtgacgct
gtgacgacaaccagagctgaggcgtcgctgcctcggaacctggcgttcaaacacccagct
gacagcaaggaggtggtcggcgtgtgcagcagggagtacatccccaaaggaactcgcttt
ggtcccctggtgggcgagatctacacggctgacagcgttcgcaaagacgccaaccgcaag
tacttctggaggatctacgagggccaagagttccaccacttcgtcgacggcctggatgag
actcgctctaactggatgcgctacgtgaacccggcgcactcggcggcggagcagaacttg
gcagcatgtcagaacggcatggagatctacttctacacggtgaagcccgtcccggccggc
gctgagctgctcgtctggtactgccacgacttcgcccgtcgtctccactacccgccgtcc
ggagagctgatgatgcagaaactcaagcagtctctcttggaggtgaaacagcagcaggtg
agcagtgaggagcgtttggttgaagcctccagcctgtcccccatcgcagtgacccccacg
ccgcccaagagggaacacagcgtcctctccatcctgcgtggcaccaacagcacctcctcc
tcctcgacgaagagggagcccagccggccgcttcccacccgcccgcgctgtgccgacagc
cccgagcgccctctgtaccctcgcgccctctacccgacgctcagaccccaccctcacatc
cctgaagacttccttggccacaaacccggccagcttgtttaccccacaactcgttcccct
ggcaaccagtcttcagccacacccagcccgtcagcgaggagcagccctgacagcagccct
caggggagcccactgggtccagcgtctttctaccccactggactgggttcttaccccggt
tactccccgccatctactcccatctcctcatctttctaccctccaggagctccttactca
cgctacctccttccccatccctaccctctgcctagcggtggtgtcccaactgtaggagga
atctttcccaggatgtaccccgtctacagcagcttgctcccccctcacgtgcccctcctg
ccctccgacacagcagggaggcgcttcctgatgccggaccacatccaaccctcctccgtc
tctgcccacagagacttcctcctccccaggcccaccagtgccttctcagctgccacgtct
ctgaaggacaaagcagggcctcaccacccttaccccgcgcaccctcacccacacagaccc
acccatgccccctccagcggctccccaacagcaggcacagcacctcccaacgagagggtg
cccaccaagcctacctcagccctgctgggcaatgccagcgagcattgcacagatgaggag
gcaatcaacctgaccaaggcgaagcgtggcccgggctcagcgggctacaaggcgctgccg
tacccgctgaagaagcagaacggcaaaatcaagtatgagtgcaacgtgtgcagcaagacc
ttcggacagctgtcgaacctgaaggttcatcttcgtgtccacagtggagagagacccttt
aaatgtcagacctgtaacaaaggtttcactcagctggctcacctgcagaaacacttcctg
gtccacactggggagaagccacatgagtgccaggtttgtcacaagcgcttcagcagcacc
agcaacctgaaaactcacctgcgcctccactcaggggaaaagccctaccactgcaaactc
tgcccagcaaagttcacccagtttgtccacctcaagctgcacaagcggctgcactcccgc
gagcgtccgcacaaatgcccccactgccaccgccactacatccacctgtgcagcctgcgg
cttcatctcaagggctactgccctgctgtctccactcactcttccttggaagatgtgcac
cgcgccaacgaagagatcgagcgctttgacgtcagcgagcacgccgagcggctggagcag
ctgcagggaggggtggaggtggaggctatgctggagaagcaggtcttggggatgctgtgg
agggagaacgacctgaagtccccccattaccatccccaccataagggcggcgccaccgac
cttatctctgcaggttacggcacatacgagtccccgaacgagacgtcagtcatcaagatg
cggcacagcagccccatcccgccacttcctgccaacgtcaccgtcaagcaggagtcagag
gatcacgcgtga
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