Epinephelus lanceolatus (giant grouper): 117265852
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Entry
117265852 CDS
T07331
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ely04040
]
117265852
Ion channels [BR:
ely04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117265852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
117265852
NCBI-ProteinID:
XP_033496501
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All DBs
Position
2:3139229..3148077
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AA seq
1037 aa
AA seq
DB search
MENLTPEQWREIMNRKMRFPPELISAIQEGKIELLCGLLKTGDGIIRQLDESEDRQWREA
LNLSIRLGNESCMDALLQGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSQAIFDHSIDNSQFAPGVTPLTLACQKDLYDIVTMLTQKGHVIPWPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSDDAMLQAFGLSRELRKLSQKEPEFKPQYL
SLEELCQEFAVELLGMCRNQSEVTTILNSCGDESQDALDEQAFEEGIPNLSRLRLAVNYN
QKQFVAHPICQQVLSSIWCGNLAGWRGSRTAWKLFVSVGIFLTMPLLCLIYWIAPKSKPG
KLLKIPVIKFLLHSASYLWFLITLLGESITMEIYRDKFASRHQDILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDMMVLSMYLASFALRVLIMLKGHFLCRDHNGTEECIYF
TQTVRDDWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPHLGKFNETFHFLFWTMFGVANQDYVDMPQFVLAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAFFYILRGIFRRICCCCTCNSETKYPPIASMTNGKESEDSQLPYRQQVIRA
LVQRYIESARREFEETKRKDIGNRITELTKTVSRMRSDMTVVQQLLMDDGHTGREALTKD
GSSFLGKYIIGAKNNFRGFNSKQDDKNSSLKVTVHYRGDGVDKEKVYSDTEQESDTQQNQ
IGECAAEESKQVTDCDVVKMEEGRAKMELGDKKETESKEQVEADKNENTDNEVREEVVAV
TSFTRVEEKVKAEATQDEAEKRREGEILTDAKEGEKHKETTPEQAQSIKVNSEKTDTKTV
ANRMKDVELQEKKVEAKWMKGKKFERDAAEKSIVRESNVKPGANKMIPSPTGSSSSQDTG
FGSQEGEGSIDGTLVRP
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccggagcaatggcgcgagattatgaacaggaagatgcgcttccct
ccagagctcatcagtgccattcaggaggggaaaatagagctgctgtgtggactgttgaag
accggtgatggcatcatccgccagctggatgagtctgaggatcgtcagtggagagaggcc
ctcaacttgtccatccgcctgggcaatgagagttgtatggacgccctcctgcagggggtc
aagtttgacttccggcagattcacgaggcactgctagtcgctgtagacaccaaccagccc
agagtggtgaagcggctgctggaccgcctggaccaagagaagggcaacaagatggatgta
cgctccttctctcaggccatctttgaccactctattgacaactcccagtttgcccctggt
gtgactcctctgaccttagcctgccagaaagacctgtatgatatagtcaccatgctcact
caaaaaggtcacgtcatcccatggccacataagatatcctgtgcttgcctggaatgtcgt
aatggccggcagtatgacctactgaagttctccttgtcccgtatcaacacctaccgtggc
atcgccagccgtgcctacctgtccatcacctctgatgacgccatgctccaagctttcggt
ctcagcagagagctccgcaagctctcacaaaaagagccagagttcaagcctcagtacctg
agcctggaggagctttgtcaggagtttgccgttgagttgctgggcatgtgtcgcaaccag
agcgaagtgaccaccatcttgaacagctgtggagacgagagccaggatgccttagacgag
caggcctttgaggagggaatccccaacctgtcacgtctgcggctcgctgtcaactacaac
cagaagcagtttgtggcccacccaatctgccagcaggtgctgtcatctatctggtgtggg
aacctggcaggctggagaggcagcaggacggcgtggaagttgtttgtctctgtggggatc
tttctcaccatgcccctcctctgcctcatctactggatcgcacccaagtcaaagccagga
aagttgctaaagattcctgtgatcaagtttctcctccactcagcctcatatctgtggttt
ctcatcacattacttggagaatcaataacaatggagatatatcgagacaaatttgcttcg
cgacaccaggacatcctgcacagctccttccacatggtgtgggtggttggattcttctgg
tatgagtgtaaggaagtgtggatcgaggggctgcggagttacttcctggactggtggaac
tgcttggacatgatggtgctcagcatgtacctcgcgtccttcgcattgcgcgtgcttatc
atgctcaaaggtcacttcctctgccgtgatcataacggcacagaggagtgtatctacttc
actcagactgtgcgtgacgactggcatcaggaggacccccagctgattgcggaggtgctg
tttgcagtgaccagcatgctgagcttcacacggctggcgtacatcctgccagcccatgag
tctctgggaactttgcagatctccattgggaagatgattgatgatatgatgagatttatg
tttatattgatgatcattggaactgccttcctctgtggcatcaacaatgtctatgttcct
tacgtcatctctccacatcttggcaagtttaatgagaccttccacttcttattctggacc
atgtttggtgtggccaaccaggactacgtggacatgccgcagtttgtgttggcagagttt
gtaggaaggattctatatggcatcttcacactggttattgtcatcgtcctgctcaacatg
cttattgctatgatcaccaactcctttcagaaaattgaggatgacgcagatgtcgagtgg
aaatttgccaggtcaaagctgtacctcagttacttcagagaaggccttacaatgccagtg
cccttcaacatcatcccctcacccaaagctttcttttacatcttgaggggtatctttaga
cgaatctgctgctgctgcacgtgtaattctgagacaaaatatccccctattgcctctatg
actaacggtaaggaatctgaagacagccagttaccttaccggcagcaggtgatcagagct
ctggtgcaacgctacattgagtcagctcgcagggagttcgaggagaccaagaggaaagat
atcggtaatcggatcactgagctgaccaaaacagtcagcaggatgcgcagtgatatgacg
gtggtccagcagcttctgatggatgatgggcacactggaagagaggcactgaccaaggat
ggctcctcctttctggggaaatacatcattggcgccaagaacaatttcagaggttttaac
agcaagcaagatgacaaaaattcatcacttaaagtgacagtgcactacagaggggatggg
gtggataaagaaaaggtttactcagatacagaacaggagtcagacacacaacagaatcag
atcggggaatgtgcagcagaggaatcaaagcaggtaacagactgtgatgtggtgaaaatg
gaggaaggcagagctaaaatggagctcggagacaaaaaggagactgagtcaaaagagcag
gtggaagcagacaaaaatgaaaatactgataatgaagtgagagaggaagtggtggcagtg
acaagttttactcgtgtagaagaaaaagtaaaggctgaagccacacaggatgaggcagaa
aaaagaagggaaggagagattctcacagacgcaaaggagggtgaaaaacacaaagaaaca
acccccgagcaagctcaaagcatcaaagtcaacagtgaaaagacagacacaaagacagtg
gcaaacaggatgaaagacgtagagctgcaagaaaaaaaagtggaggcaaaatggatgaag
ggcaaaaagtttgagcgtgatgcagcagagaagtccattgtcagggagagcaatgtgaaa
cctggagccaataaaatgattccctcaccaacaggcagcagcagctcacaggacacaggc
tttggttcgcaagaaggggagggatcaattgatgggacattagtgagaccgtaa
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