Epinephelus lanceolatus (giant grouper): 117265990
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Entry
117265990 CDS
T07331
Name
(RefSeq) thrombospondin-3a-like isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04145
Phagosome
ely04510
Focal adhesion
ely04512
ECM-receptor interaction
ely04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117265990
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117265990
09144 Cellular community - eukaryotes
04510 Focal adhesion
117265990
09142 Cell motility
04820 Cytoskeleton in muscle cells
117265990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117265990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ely04147
]
117265990
00536 Glycosaminoglycan binding proteins [BR:
ely00536
]
117265990
Membrane trafficking [BR:
ely04131
]
Endocytosis
Phagocytosis
Opsonins
117265990
Exosome [BR:
ely04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117265990
Exosomal proteins of colorectal cancer cells
117265990
Exosomal proteins of bladder cancer cells
117265990
Glycosaminoglycan binding proteins [BR:
ely00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117265990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF_MSP1_1
EGF
Motif
Other DBs
NCBI-GeneID:
117265990
NCBI-ProteinID:
XP_033496748
LinkDB
All DBs
Position
14:5476812..5509532
Genome browser
AA seq
951 aa
AA seq
DB search
MGWSVPVLLSVLCIGLTTGVPDGPDVQVIDMLTLQDPKQTVAAVEKLSAGLSALSDIYVV
STFRLPAKLGGVLMGLYSKQDNRKYLEVAVMGKINKVLVRYVRADGKIHTVNLQNAHLAD
GRTHSIILRLGGLQRDNMNMELYVNCRLADSSQGLPSLVPLPREADMVEIRHGQKAYARL
QGAVESLRLALGGTVAKAGALTDCPFQGDSSAYNTVSGEVNSILGDHTKALIGQLIIFNQ
ILGELRQDIREQVKEMSLIRNTILECQVCGFHEPRSRCSPNPCYKGVSCMESLHYPGYTC
GPCPPGTTGNGTHCHDINECELQPCFSPEACVNTVGGFTCKPCPPGLWGAPLAGTGLDYA
KTHRQDCVDIDECLDLPDVCVSNSVCINTVGSYKCGGCKPGFIGNQTSGCFPRKSCAALT
FNPCDSNAHCAMERNGEVACRCNVGWAGNGNTCGQDTDIDGYPDRSLPCMDNDKHCKQDN
CVFTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLVPNKDQQNSDSDSFGDACDNC
PNVPNSDQKDTDSNGQGDACDQDIDGDGIPNVLDNCPKVPNPMQTDRDRDGVGDACDSCP
ELSNPMQTDIDNDLVGDVCDTNQDTDGDGLQDSRDNCPDIPNSSQLDSDNDGLGDDCDHD
DDNDGVIDDYDNCRLIVNPNQKDSDANGVGDVCENDFDNDTVMDLIDVCPESAEVTLTDF
RAYQTVILDPEGDAQIDPTWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTV
TDDDYAGFIFGYQDSSSFYVVMWKQTEQSYWQTIPFKAMAQPALQLKAVKSRTGPGQFLR
NALWHTGDTPGEVKLLWKDPRNLGWKDKTSYRWQLSHRPQVGYIRMKLFEGTNMVADSGI
VIDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTVPEDFQTHRKQVMMHIQV
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgggttggagtgtcccggttctgctgtcagtcctctgtattggactcacgacgggagta
ccggacggaccggacgttcaagtaatcgacatgttgactcttcaggacccgaagcagacc
gtagcagctgtggagaagctgtcggccggtctgagcgcgctcagtgacatctatgtggtt
tccacgtttcggctgccggcgaagttgggcggcgtcctgatgggcctctacagcaaacag
gacaacaggaagtacctggaggtcgccgtcatggggaagatcaataaagtcctggtgcgc
tatgtgcgagcagacgggaagatccacaccgttaacctgcagaacgctcacctggcagat
ggacggacgcactccatcattctgaggctcggcggtcttcagcgtgacaacatgaacatg
gagctctacgtcaactgccgactggccgactccagtcagggcctgccctcgttggtccct
ctgcccagagaggcggatatggtggagatcagacacggacagaaggcctacgcccgacta
cagggtgcagtggagtccctcagactggctctaggaggcactgttgctaaagctggagct
ctgacggactgtcctttccaaggagactcttcagcctacaacacagtgagtggggaggtg
aactccatcctgggtgaccacaccaaggctctgatcggtcagctcatcatcttcaatcag
atcctgggagaactgcggcaggacatcagagaacaggtgaaagagatgtctctgatcaga
aacaccatcctggagtgtcaggtttgtggtttccatgagcctcgctcccgctgctctcct
aacccctgctacaagggcgtgtcctgcatggagagtctgcactaccctggatacacctgt
ggaccctgcccgcctgggaccaccggcaacgggacgcactgtcacgacatcaacgagtgt
gagctgcagccgtgtttctctcctgaagcctgtgtgaacactgtgggggggttcacctgt
aagccctgtcctcctggactgtggggggcgccgctcgctggaaccggactggactacgcc
aagacacacagacaggactgtgtagatatcgatgagtgtttagatctcccagacgtctgt
gtatcaaactctgtgtgcatcaacactgtggggtcatacaagtgtggaggctgcaaacct
ggattcattggtaaccagacatcagggtgcttccccaggaagtcgtgtgctgcgctgacc
tttaacccctgtgactccaacgcccactgcgccatggagaggaacggagaggtcgcctgc
aggtgtaacgtgggttgggctggtaatggtaacacatgtggacaagacacagacatcgac
gggtatcctgaccgctctctgccctgtatggacaacgacaaacactgcaaacaggacaac
tgtgtgttcacaccaaactctggtcaggaggatgccgacaacgacgggatcggagatcag
tgtgacgaggacgcagatggagacggcatcaaaaatgtggaggataactgccggctggtc
cccaacaaagaccagcagaactcagacagcgactcgtttggagacgcctgtgataactgt
cccaacgtccccaacagcgaccagaaggacaccgacagcaacggacagggagacgcttgt
gaccaggacatcgatggagacggtattccaaacgtcctggataactgcccgaaggtaccg
aacccgatgcagacggacagagacagagacggagtgggagacgcctgtgacagctgtcct
gaactcagcaaccccatgcagacggacatcgacaacgacctggtgggagacgtctgtgac
accaaccaggacacggacggagacggtctccaggacagcagagacaactgtccagacatc
cccaacagctcccagctagactctgataacgacggccttggagacgactgcgaccacgac
gatgacaacgatggcgtcattgacgactacgacaactgccgactcatcgtcaaccccaac
cagaaagactctgacgctaacggtgttggggacgtctgtgagaacgactttgataatgat
acagtgatggatttgattgacgtgtgtccggagagcgctgaggtcactctgacagacttc
agagcctatcagacggtcatcctggacccagagggcgatgcccagatcgaccccacctgg
gtggttcttaaccagggtatggagatcgtccagacgatgaacagtgacccggggttagct
gtgggctatacggcgtttaacggcgtcgacttcgagggaacgtttcacgtcaacacggta
accgacgatgactacgccggcttcatctttgggtaccaggactcctcgagtttctacgtg
gtgatgtggaaacagacggagcagtcgtactggcagacaatccccttcaaagccatggcc
cagccggccctgcagctcaaggcggtgaagtctcggactggaccaggacagttcctgagg
aacgccctgtggcacaccggagacacacctggagaggtgaagctgctctggaaggatcca
cgaaacttaggctggaaggacaaaacctcataccgctggcagctcagccaccgaccgcag
gtgggctacatcaggatgaagctttttgaggggacaaacatggtggctgactctggcata
gtgatcgacaccacgatgagaggaggccggctcggtgtcttctgtttctcccaggaaaac
atcatctggtccaacctacgctacaggtgtaacgacacggtgcctgaagacttccagact
catcgtaaacaagttatgatgcacattcaggtgtga
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