Epinephelus lanceolatus (giant grouper): 117266003
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Entry
117266003 CDS
T07331
Symbol
pop1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117266003 (pop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ely03009
]
117266003 (pop1)
03016 Transfer RNA biogenesis [BR:
ely03016
]
117266003 (pop1)
03029 Mitochondrial biogenesis [BR:
ely03029
]
117266003 (pop1)
Enzymes [BR:
ely01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
117266003 (pop1)
Ribosome biogenesis [BR:
ely03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
117266003 (pop1)
Transfer RNA biogenesis [BR:
ely03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
117266003 (pop1)
Mitochondrial biogenesis [BR:
ely03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
117266003 (pop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
117266003
NCBI-ProteinID:
XP_033496797
LinkDB
All DBs
Position
14:35956148..35969277
Genome browser
AA seq
1015 aa
AA seq
DB search
MRAFVCQKMSAAKVKMRDKKLRNQPASVQYPSSHSSTQNGGDTSVTGMWKDCVSITTKQR
LKSYDTMLLLKATGIGGGGDNDPTTEKSRDPQKRGGWVRGHQKDGGGYAKEMPKYISAGG
FVRARAAEVCAMLKAVTKTTGSCHVFGALPKHMRRRAMGHNTKRLPHRLRDVANRMREKS
LQAGSKKKEQAKSKSRKARRRHGNLLLEFNRRQRKNVWLETHIWHAKRFHMVKKWGYCLG
DRPTYKCYRPSYRAMSSHCLLQDLSYYCCIELQGEEDKLLAALSQLTSKEAGPTFAAALC
LSGRKQGSVVVYRAGQYPSKPLGPVTFLWRPRSQGSTHRQLWIWAHPTIKQDLLPELQSV
CQCDEAVVPPVIPVATPAEVVPTLETEPKPEKSPEAQQITGTKRKRTCEDAGAPPAKKIL
GDGTRSPTTPVTWKSSSNGIVINDLTMEIVRYRLIGPQSHSVLAETLEAATDCDEMSKSQ
PSSFWWPEHCKDQSKMNLHQQQADVFHILKGMYSTGELPAGTVLGLTVDDPRLTLPTKKV
KALPCVKQEQEVDEEKRRELMLRGVPEPCCQSYLWEQSVRDNVTDNKISEQELNRMKSEV
LVPGFRLSPTPLQGRVPILLVHQPGKQVGHEMSSWGAGWDLLLPKGWGMAFWVPLVYRGV
RIGGLNMSLKHSQNKGAPHFPHDYPDCPAGIRFQEEQEAELLDKFKRRPPAKRTSYIKHG
CLAPFRCPWQQLAEEWELILREGGEERKGDCQTQTTTQADTVMEEEMTSHGDITVTKPPS
HITVLRNRKSLRLLSGWCRPTTSKGQRPCRVGEVPPLDRSAMKQFFTAHEMSLVWVRLSL
LSKGNPQLHAIVCVPTAEDLKLLYSKPVDSGPQEPPHKDHFKTRIRRRKKGPKKVATLSS
DKTEGKESDLPSASEPNPTTPEGPKSSPQPSSDLILGLWPDPLPSVTSHCTRVTLGWVTQ
GDFSLSAGCGEALGFVSVAGLLNTLFNQPMEHRGMLLLRNPTSLHYRFAKINIEV
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgagagcctttgtctgtcagaaaatgtctgctgctaaagtgaagatgagggacaagaag
ctgagaaaccagcccgcaagtgttcagtacccatcttctcacagcagcacacagaatgga
ggagacacatcggtcaccgggatgtggaaagattgtgtaagcattacaacaaaacaaagg
ttaaaaagctatgacaccatgctcctcctgaaggccacaggaataggtggaggtggcgat
aatgatccaactacagaaaagtcaagggaccctcagaaacggggtggatgggtccgtgga
catcagaaagatggtggaggttacgccaaggagatgcccaagtacatcagtgctggaggt
tttgtcagggccagggcggcagaggtgtgtgccatgttgaaagctgtcaccaagacaaca
ggcagctgccatgtgttcggagccctgcccaaacacatgagaagacgggccatgggccac
aacaccaagcggctccctcacagactgagggatgtggccaacagaatgcgagagaagagc
ctccaggctggctcgaagaagaaggaacaggcaaagagcaagagccgcaaggcccgccgc
cggcacggaaatctgctgcttgagttcaaccgccgccagaggaagaacgtgtggctggaa
acacacatttggcacgccaagcgcttccacatggttaaaaagtggggctactgcctcggg
gacagacctacatacaaatgctatcggcctagctacagggcaatgagcagccactgccta
cttcaggacctttcttattactgttgcatagagctacagggagaggaagacaagctgctg
gctgctctgtcacagctgacaagcaaggaggccggccctacatttgctgcagcactgtgt
ctgtcagggcgaaaacagggcagtgtggtggtgtacagagcaggacagtacccctcaaag
cccctgggccctgtcaccttcctctggagaccccgttcacagggctcaacccacaggcag
ttgtggatttgggctcatcccactattaaacaggaccttcttcctgagttacagtctgtg
tgccagtgtgatgaggcggttgttcctccagttattccagtagcgacaccagctgaggtt
gttcccaccctagaaacagagccaaagcccgagaagagccctgaggcccagcagataact
ggaaccaagagaaaacgaacctgtgaggatgccggtgcacctcctgctaagaagatactg
ggagatggaaccagatctcccacaactccagttacctggaagtccagctcaaatggaata
gttataaatgacctcacaatggagattgtacgctatcgcctgattggaccacagtcccat
tctgttctggcagaaactctggaagctgctacagattgtgatgaaatgagtaagtcccag
ccctcctccttctggtggcctgagcactgcaaagaccagagcaagatgaatctgcatcaa
caacaagctgatgtctttcacatactgaaaggcatgtattcgactggagagctccctgca
ggcacagtgctgggtctgactgtagatgaccccaggctgactttaccaacaaagaaggtt
aaagctttgccctgtgtaaagcaggaacaagaggtggacgaggagaagagaagggagctg
atgttgcgaggagtcccagaaccctgctgtcagagttacctgtgggagcagtctgtccgg
gataatgtcactgataataagatatcggagcaggagttgaaccgtatgaagagcgaggtg
ctggtgccggggttcaggctgagccccacacccctgcagggccgagtccccatcctgctg
gttcatcaacctggtaagcaggtgggacatgagatgagctcctggggtgctggatgggac
ctgctgcttcctaaagggtggggcatggccttctgggtcccactggtgtacagaggagtt
cgcatcggagggctgaacatgagtctgaaacactctcagaataaaggagccccccacttc
ccccacgattacccagactgccctgcaggcattcgttttcaggaggagcaggaggcagag
ctcctggacaagttcaaaaggcgtccgcccgccaaaagaaccagttacattaaacatggc
tgtctggctccgttccgttgcccgtggcaacagctggccgaggagtgggagcttatcttg
agggaaggaggagaggagaggaaaggagactgccagacccaaactacaacacaggctgac
acagtgatggaggaggagatgacatcacatggagatatcactgtcacgaagcctccgagc
cacatcactgtactgaggaacagaaagtcactgaggctgctctctggttggtgcagaccc
acgacatctaaaggtcaaaggccatgccgtgttggagaggtgccacctctggaccgctca
gctatgaaacagtttttcacagcgcacgaaatgagtctggtgtgggtgcgtctgtcacta
ctgtccaaaggcaatccacagctccacgccattgtgtgtgtgccaactgcagaggacctg
aagctgctgtacagcaagcctgtggacagtggcccccaggagcccccacacaaagaccac
tttaaaaccagaattaggcgtcggaagaagggacccaagaaagttgcaacattgtcctct
gataagactgagggcaaagagtcagaccttccctctgcctctgaaccaaaccccaccaca
cctgaaggccccaaatcttccccccagccttcctctgacctcatcctggggctgtggccg
gatcctctgccaagtgtcacctctcactgcacccgagtgactctaggctgggtcactcag
ggcgacttctccctgtctgcaggctgtggggaggccctggggtttgtcagtgttgccggt
ctccttaacaccctctttaaccagccgatggaacacagaggaatgttgctgctgcgcaac
cccacatctctgcactaccgctttgctaaaatcaacatagaggtctga
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