KEGG   Epinephelus lanceolatus (giant grouper): 117266193
Entry
117266193         CDS       T07331                                 
Symbol
mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
ely  Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:ely00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ely03400]
    117266193 (mdc1)
DNA repair and recombination proteins [BR:ely03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    117266193 (mdc1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 FHA BRCT
Other DBs
NCBI-GeneID: 117266193
NCBI-ProteinID: XP_033497127
LinkDB
Position
14:16493895..16507778
AA seq 2107 aa
MDATQMICDSILESDEDENEEENENERGRPLAKLCILKNQHIPETELPLFLGDNVLGRDP
NTCTLPLPASSISKQHATICISVYKRKGSHSEVDIEALVWDLGSMNGTRKGRLKLTPNVR
YALSEHDSLVVADIPCQYVSCVVDAVSAQGDMRTPVSKNSGVNARLPDASGEKVGDTSTG
GKKSVNGGTKARVSLPDQGDTKKTPVRSSCLSFEQTPTQPHGSLVPESDSDSDGERGDRL
RKALVSDSDSHKSGPDCSTFLSPRNTIVPESEDESPTTPSSSTKNRPHKHVSFSKEETDE
DVGRQQLKKKEAFGIVDDSEVEEGMEEGMEEERAALGGIKSGGSGQHVSAKQESNVSLTG
EDKLLVSTLADAIPAFNMDSDTDVEGEEERVASAGPVALNTNQQADQPPNTAQFHMDSDT
DVDEDDDALDEVPKSSSADHTKPPHVISVIQPEGITMDSDTDADDDDAAAVSDATTEAKP
TSLQSPHKADSAPSTQLKDFHLDSDTDVDEEEEKEHGTNNTCPKIDETPTRLDIKPVEPV
SVPAASSGLHLDSDTDDEAIPSPASSEPSVASPVTESRQTAGAGAGLDILSDSDTDVEDN
SPLVIPLAVSTLSDGLHSGSDADTDVDESSVPPAGDGVNPSKPKADSGTDVEDKEVDFGE
TGEGQIPNLCRENTPGLLAPLLQNCSTPVQASERDVEDMQTQAFMSPSSVPFKLPPALRP
TALSSCSDSQESEDFVVAETQSFILQTRDRQGNPPEDHTMNPTQEFCLESSGDERGEQSS
RGLSFQLGLSDSSHLQGRAQTLATESTQAFVPAEGGVNMEETQAYAAISNADRTSLENEA
TQTYGDDEEPARSSVMSANLALEATQPYISEPRSDSEDETDEDERNSTATVETQQFPTSS
TLAMAQTQPMSAFEEEEEDLEEENPISSVLQVEPRRQNEKEERDEHEKAAQPQKTHLPVA
ATQPMPVSDDEESDDEDSIPGPRRRKAKPLQLEEEQSQMLPNSELSLVETQPMHDGVAQT
QPMATSGNEESDDEDSLPGPRKRKAKQLRIEDEQTQTLTNSELSVVATQPMEMAEDGEGD
EEDLIPGPRRRRAKPLQLKETQPLTSSEVTAAETQPAVIGEDRESDDEDSIPGPRKRKAK
VLQIQEEETQPLTNPEASTVETQPLETKTGRQPQRRKGSQSEAGTSGTTVNGKRGTRATL
REEEEQAECSEPPKRQTRGKNKALPTTRGRRGKSRPDEEGSEEEEEEEVEPPKRAKGKIS
MRQQKVNKEEEERPETARNKSAANNDLIKEQDEGRERDKLERERKEKEDQERLQAENAER
SRLEWERAEKARLERERKEGEEKKRAERVQKEKEEQLERERKEKEEKERLEHEKAEREEK
ERLEREEKERIEKERKEKEENERLEHEKAEREEKERLEREQKERFEKERKEQEEKERLET
AKQEKEAKEKQIKEQQKNKEEEKKAKTPARSGRATRREQRTIATPSTTEPEQDSTISAND
DGPARRTRSRSNSSNSVSSERSTSSVSTQGNRGRGRGRGRGGKRTSEPPQTAIARSSNRR
RTVAAESTEQDSKDIPPQVVLSRSSSINSLNSEISSCSTSSQRGGRGGRQRGRGRKTEPE
PVSIPPSHSDQNLASKPTARGRKSRKAEEPSNEVPHDDDEEKADSQQPSTTRGRRRANAN
DAEPAADKKDPTQDQECASEESTLPKKSDRGRDREVVKSETVEAPVAPAASDRDEAKEKR
KGRKRELEEEPSSSSNISKGKEKAETTEAAKEETKDDIPVQAKRKGRASTAQAKTNTQDS
PTEVKVKEDSEKMEEETVEKKGRGRTSAVQKKKKEEQEESGASVDQDPHVEASEPKTPTS
SASRKRQAPANTSPVAKTPRSSSASPAAGGRLRVASQAYKVLFTGVVDEDGERVLARLGG
SIAKGVADMNCLVTDKVRRTVKFLCAVAKGVPIVTTQWLDKSGKAGSFLPPKAFLVKDPE
QEKKFNFCLQESLGTAGRQPLLQGYEIHVTKSVKPEPVQMKDIISCSGATFLPKMPSSHK
PQTVVISCEEDWSLCGPALSASLPVVTADFILTGILQQKVDLQTHTLSAPTNAQQPAGGK
GRSRKKT
NT seq 6324 nt   +upstreamnt  +downstreamnt
atggatgctactcagatgatctgtgactccatcttggagtcagatgaggacgaaaatgaa
gaggagaatgaaaacgagagagggcgaccattggctaaactgtgcatcttaaaaaatcaa
cacatccctgagacagagttgccactctttttgggagataatgtgcttggccgtgacccc
aacacctgcaccctgcccctgccagcatcctcaatatccaagcagcacgccaccatctgc
atctctgtctacaagagaaaaggcagtcatagtgaagtggacatagaggctttggtctgg
gacctagggagcatgaatgggacccgcaagggccgcttaaagctgactcctaatgtccgc
tatgccctcagtgagcatgacagtttggtggtggcagacatcccgtgtcagtatgtcagc
tgtgttgtagatgcagtttctgctcaaggggacatgaggactcctgtgagcaaaaattca
ggggtaaatgcaaggttgccagatgcctctggagagaaggtaggtgacacaagcacaggc
ggcaagaaatctgtcaacggaggtacaaaggctagggtgtcactacctgatcagggggac
acaaagaagactcctgtgaggtccagttgcctgtcctttgagcaaactccaacccagcca
catgggagcctggtcccagaatctgactcagactcagatggagaaagaggagacagactg
cgcaaggctcttgtgtctgattccgactcccataaatcaggtcccgactgctcaacattc
ctgagtcctagaaacacaattgtacctgaaagtgaggatgaaagtcccacaacaccgtcc
tcctccactaaaaatagacctcacaaacatgtcagcttcagcaaggaggagacggacgaa
gatgtggggcgacagcagctgaagaaaaaagaggcatttgggattgtggacgacagtgaa
gtggaggaagggatggaggaagggatggaggaagaaagagcagcactgggagggataaag
tctgggggaagtggacaacatgtgtcagcaaagcaggaaagtaatgtcagtcttacagga
gaagataaattgcttgtatccacactagcagatgcaatccctgcatttaacatggacagt
gacactgatgtggagggagaggaggaaagggtggcatctgcaggtcctgtggccttgaat
acaaaccaacaagctgatcaaccaccaaacacagcccagtttcacatggacagtgataca
gatgtcgatgaggatgatgatgccttagacgaagtacccaaatcttcctctgctgaccac
accaaaccccctcatgttatttctgttattcagccagagggcatcactatggacagtgac
actgatgcagatgatgatgatgctgctgctgtgtcagatgcgactacagaagcaaaaccc
acatcacttcagagtccacacaaagctgactctgctccttcaactcagctgaaagatttc
cacctggatagtgacacagatgttgatgaggaagaagaaaaggaacatggaacaaacaat
acatgccctaaaatagatgaaactcccactagattagatatcaagccagttgagcctgtt
tccgtccctgctgcgtctagcggtctgcatctagacagtgacacagatgatgaagctatt
ccctcccctgccagcagtgaaccttcagtggcgtctcctgtcacagaatcacgccaaact
gcaggtgcaggagcaggtttggatattctgtctgacagcgacacagatgtggaagacaac
tctcctttggtcatacctcttgctgtctcaaccttgtcagatggtcttcactccggttct
gatgcagacacggatgttgatgaatctagcgtgccccctgctggagatggggtcaatcca
tccaaacctaaagctgacagcggcacagatgtggaagataaggaggtggattttggagag
acgggtgagggccagattcctaacctgtgcagagaaaatactccagggttgctggctccc
ctcctgcagaactgctctactcctgtacaggcgtcagagagagacgtggaagatatgcag
actcaggctttcatgagtccttcttctgtaccatttaaattaccccctgctctcagacct
acagcattgtcttcttgttcagacagccaggagagtgaggactttgttgtggctgagacg
cagtccttcattcttcagaccagagaccgccagggcaaccccccagaggaccacaccatg
aaccccacccaagaattttgccttgagtcatctggtgatgaaagaggcgaacagtccagc
agaggactgtctttccagctggggctttcagacagcagccacctgcagggtcgggcccaa
actttagccacagagagcacccaagcgtttgtccctgcggaggggggtgtgaatatggaa
gaaacccaagcatatgcagccatctcaaacgcagacaggacctccttagagaatgaggct
acacagacttatggagatgatgaagaacctgccagaagttcagttatgtctgcaaatttg
gccttagaagcaacacagccatatatttcagagccccgcagtgattcagaggatgaaacc
gatgaagatgagagaaatagcactgccactgttgagactcagcagtttcccacctcatct
actcttgccatggctcaaacccaaccaatgtctgcctttgaggaggaggaggaggatttg
gaagaagaaaatccaatttcttctgtattacaagttgagcccagacgacagaatgaaaaa
gaagagagggatgaacatgagaaagcagctcaacctcaaaagacccacctacctgtagct
gcaactcagcccatgcctgtaagtgacgatgaggaaagtgatgacgaggactcgattcca
ggtccacgaagaagaaaagcaaagcccctgcagcttgaagaagagcagtctcaaatgctc
ccaaactctgagttatcacttgttgaaactcagcccatgcacgatggtgtagcccaaact
cagcccatggctacaagtggaaatgaggaaagtgatgatgaggactcgcttccaggtccc
cgaaaaagaaaagcaaagcaactgcggatagaagatgagcagacacaaacactgacaaac
tctgagctctctgttgttgcaactcagccaatggaaatggctgaagatggagaaggtgat
gaagaagacctgattccaggtccacgaagaaggagagcaaaaccattgcaacttaaagag
acacagcccctcactagttctgaagtcactgctgctgaaacacagcccgcggtcataggt
gaagacagagaaagtgatgatgaggactcgattccaggtccacgaaaaagaaaagcaaag
gtactgcaaattcaagaagaggagacacagccgctcacaaatcctgaggcctccactgtt
gaaactcagcccttggaaacaaaaactggccggcagcctcagagacgaaaagggagtcaa
tctgaagctggaaccagtggcaccactgtcaatggtaaaagagggacaagggcaacatta
agagaagaggaggagcaggcggagtgttctgaacctcctaagagacagacaagagggaag
aataaagctctgccaactaccagaggaaggaggggaaagtcaaggcctgatgaggagggg
agtgaggaggaggaggaggaggaggtagagccgcctaaacgagccaaagggaaaatatcc
atgaggcaacagaaagttaacaaggaagaggaagagcggcctgaaacagcaagaaacaag
agtgctgcaaataacgacctaataaaggaacaagatgaagggagggaacgagacaaatta
gaaagggaaagaaaagagaaggaagaccaagaaagattgcaggctgaaaatgctgaaagg
tcaagacttgagtgggagagagcagaaaaagcaagattagagagggaaagaaaggaggga
gaagaaaagaaaagagctgagagggtgcaaaaggaaaaagaagaacaattggagagggaa
agaaaggagaaggaagaaaaagagagattagagcatgaaaaggcagaaagagaagagaag
gaaagattggagagggaagagaaggagagaatagaaaaggagagaaaggagaaggaggaa
aacgagagattagagcatgaaaaggcagaaagagaagagaaggaaagattggagagagaa
cagaaggagagatttgaaaaggaaagaaaggaacaggaggaaaaagaaagattggagaca
gcaaaacaagaaaaagaggccaaagaaaaacaaataaaagagcaacaaaagaacaaagaa
gaagaaaaaaaggccaaaacacccgcgagaagtggaagagcaactagaagagaacaaaga
acaattgctaccccgagtacaacagaaccagaacaagactcaacaatatcagccaatgat
gatggcccagcaaggaggaccagatctcgctccaactcttccaactctgtcagctcagag
agatctacttcaagtgtgagcacccaggggaacagggggcgaggcagaggcagaggcaga
ggaggaaagaggaccagtgagccaccccagacggccatcgctagaagcagcaatagaagg
aggacagtggctgcagagtcaacagaacaggacagtaaagatattcctccacaggtagtc
ctttcaaggtccagctccatcaactccctcaactctgagatatccagctgcagcacgagc
tctcagagaggaggaagaggaggcaggcagcgaggaagagggaggaaaactgagccagag
cctgtctccattcctcctagtcacagtgaccagaatttggcctccaaacctacagccaga
ggcaggaagagcaggaaagcagaggaaccctctaatgaggttccccatgatgatgacgaa
gagaaggcagactctcagcagcctagtaccacaagagggcgacggcgagccaatgcaaat
gatgcagaacctgctgcagataagaaagaccctactcaggatcaggagtgtgcaagtgaa
gagtcaactctcccaaagaagagtgacaggggcagagaccgagaagttgtaaagagtgag
actgtggaggcaccagttgctcctgctgccagtgatagagatgaagctaaagagaaaaga
aaaggaagaaaaagagagttggaggaagagcctagcagtagctccaacatttccaagggg
aaggagaaagccgaaacaacagaggcagcaaaagaagaaacaaaagatgacattccagtc
caggctaagagaaaaggtagagcgtccacggctcaggctaagacgaacacacaagattcc
cccactgaagtgaaggtgaaagaagacagcgagaaaatggaggaggagactgttgagaaa
aaaggcagaggtcggacgtcagctgtccagaaaaagaagaaagaggagcaggaagaaagt
ggagcatctgttgaccaggatccacatgtggaggcctcagagcccaagactccgaccagc
agtgcatcccggaagcgacaggctcctgcgaacacctcacctgtggcaaagacccctcgt
tcctcctctgcttccccggcagcaggtggtcgattacgagttgccagccaggcttacaag
gtgctgttcacaggagttgtggatgaagacggggagagagtcttggctcgtttgggaggc
agcatagctaaaggtgtggccgacatgaactgtctggtgactgataaggtgcgcaggact
gtcaagttcctgtgtgcggtggctaaaggagtccccattgtcaccacacaatggctggac
aagagtggcaaggcggggagcttcctgcctcctaaagcttttcttgtgaaggatccagag
caggagaagaagtttaatttctgcctgcaggagtctctggggactgctggccgtcagcct
ctcttacaggggtatgagatccacgtaacaaagtcagtgaaaccagagccagttcaaatg
aaagacataatctcctgcagtggagccacctttctacctaagatgccctcttctcacaag
cctcagactgtagtgatttcctgcgaggaggactggtcgctgtgtggcccggctctctct
gcatctctcccagtcgtcacagctgatttcattctcacagggatccttcagcagaaagtt
gaccttcagacccacacactttctgctcctacaaatgctcaacagcccgcaggaggcaag
ggacggagcaggaagaagacttaa

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