Epinephelus lanceolatus (giant grouper): 117266368
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Entry
117266368 CDS
T07331
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ely03021
]
117266368 (supt6h)
03036 Chromosome and associated proteins [BR:
ely03036
]
117266368 (supt6h)
Transcription machinery [BR:
ely03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
117266368 (supt6h)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
117266368 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
S1
HHH_3
S1_RRP5
HHH_9
Tex_YqgF
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
117266368
NCBI-ProteinID:
XP_033497424
LinkDB
All DBs
Position
2:13415232..13434028
Genome browser
AA seq
1757 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKTQRFMEEDDEEEEEENTEDQDERGNLRGLIDDGDE
EGEEEEDEERARSASGGGSDSEEEVRHRRKKRNYDDYLDDDDLDLIEENLGVKVKRRKKK
YERVKTLDDDEEDDDEKDLIADEIFHGDAEGELEEGEAVDEPLHHAEDDEEGEDEESDID
DFIVDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADAYDQGEEEEEDQDD
ESWDRPKKQTKRRQGRKSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKPAE
DDELEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQ
FEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQKMQSFQFEQISA
DPDKPLADGIRPLDTADMERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNAAKTSKKRLK
KIKEVSEDGEEEELEVEEEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGE
NLRDSYQRHETEQFPAEPVELAKDYVCSQFSTPEAVLEGTRYMVAMQIAREPLVRHVLRQ
TFQERAKINIKPTKKGKKEVDEAHFAYSFKYLKNKPVKELNGDQFLKMCLAEEEGLLSID
ICIDLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALTQFLYPQMAKE
LKSKLIIEAKESIVRSCCRRLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAYAP
SRDTPVFCALINGEGEVVDFLRLPYFMKRRNAFREDEREKKAHDIENLKRFLSSKKPHVV
AVAGENRDAQMIMEDIKRTISELEQESSLPAVGVELVDNELATLYMNSKKSENDFRDYPP
LLRQAVSIARKIQDPLIEYAQVCSSDDDILCLKLHPLQEHVVKEDLLSALYCEFINRVNE
VGVDVNRAIAHPHTQSLVQYVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVF
INCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGA
LEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVPYRVPNTEE
VFNLLTKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDSTGLWQCPFCQQDNFPE
LSEVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIM
KIDIEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDTESEDQKQEEELKKKQQRTPYIKR
VIAHPNFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGK
ENAFSLGHTLWINNEEFEDLDEITARYIQPMASFARDLLGHKYFQDCNQGSKEKMEDLLM
RTKKEKPTFIPYFISACKDLPGKFILGYQPRGKPRVEYVTITPDGFRYRSQIFPTVNGLF
RWFKDHYQEPVPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFSAIA
AVTGQGQNPNTTPAQWGSSQYGYGGSTGGGGGSSSAYHVFATPQQPMATPMMTPSYSYTT
PSQQALGTPQYTGSTPQSSHSHTHAHPHGSHVSHHNHHGHHSSHHGHASSTPSSSTSSRG
RTPQQQQQQQAPPKASSSNASAVDWGKMAEQWLKEKEAEGRKKAQRMTPRPSPSPMIEST
PMSIAGDATPLLDEMDR
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttattgagagcgaggctgaggagtcagaggaggagttcgaagagaaagac
ctaaagcccaaaaagacccagaggtttatggaggaggatgatgaggaagaagaagaagag
aacacagaggaccaggatgagcgaggaaatttacgtggactcattgatgatggagacgag
gagggggaggaggaggaggatgaagagcgtgcaagaagtgcaagtggaggggggagtgac
tcagaggaggaagttaggcatcgacgtaaaaagcgcaattatgacgactacctggatgac
gatgatctggacctaattgaggaaaatttgggtgttaaagtgaaaaggaggaagaagaaa
tacgaacgtgtaaaaacacttgatgatgatgaagaagatgacgacgagaaggacttgatc
gcagatgagatctttcatggtgatgcagagggtgagctggaagaaggcgaggctgtcgat
gagcctctccaccacgcagaggacgatgaagaaggagaggatgaggagtcagatatagat
gattttattgtggatgatgacggccaacccatcaccaaaaagaggggcaagaagttctca
ggatacacagatgcagccctccaggaggcccaagaaatttttggcggtgactttgacttt
gctgactttgacgcggacgcatatgaccagggtgaggaggaggaagaagaccaggatgac
gagagttgggacagacccaagaagcagactaagaggaggcaagggaggaagagcatcttt
gagatctatgagcccagtgagctggaaagcagtcacatgactgaccaagacaatgagatc
cgctctacagatatgcctgagagattccagttacgatcgatccctgttaaacctgccgag
gatgatgagctggaagaggaagcagagtggatcttcagacatggcttttccactttaacg
atctccatgcaggagagcacagactatctagacagggggacaaccacaaacttcagcagg
aaaggccctagtacaatcgccaagatcaaagaggcgctcaacttcatgaggaaccagcag
tttgaggtcccattcatagctttttacaggaaggaatatgtggagccagagcttaacatc
aatgacctgtggaaagtgtggcagtgggatgaaaagtggactcaactgaagacccggaag
cagaacctgactcgtctgtttcagaagatgcagtccttccagtttgagcagatctcagct
gaccctgacaaacccttggctgacggcatccgtcctcttgacacagctgacatggaaagg
ctgaaagatgtgcagactcttgaagagctgggcgatgtgtacaaccactttctgctctac
tatggtcgagacatccccaagatgcagaatgctgcaaagaccagcaagaagaggctcaag
aagatcaaagaagtgtcagaggatggtgaagaagaggaattggaagtcgaggaagaggaa
gaacagaaaggaccagacctcaagctggcgtctcgcagagatatgtacagcatctgtcag
agtgtaggacttgatggcttggctaaaaagtttgggttaactccagagcagtttggagag
aatctgagagacagttaccagcgtcacgaaacagagcagttcccggctgagcctgtggag
ctggccaaagattatgtctgcagtcagttcagcactcccgaggcagtgctggagggaacc
aggtacatggtggccatgcagatcgctcgtgaacctctggtcagacatgttctccgacag
acctttcaggagagggccaagatcaacatcaagccaacaaagaaaggcaaaaaggaggta
gatgaggctcattttgcctactccttcaagtatcttaagaacaagccagtaaaagagctg
aatggggatcagttcttgaagatgtgcctggccgaggaggagggtctgctttccatcgac
atctgtattgaccttataggggtcaaagggtatgctggggaccagacgtactttgatgag
atcaaacagttctactacagagacgagttcagccaccaggtgcaggagtggaacaggcag
cgaactttagccatagagagagctctcactcagttcctgtatcctcagatggccaaggaa
ctcaagagcaaactgatcattgaggccaaagagagcattgtcaggtcctgctgtcgtcgg
ttgtataactggctcaaagtggctccttaccgaccagatcagcaagttgaggaagatgat
gatctgatggatgagagtcagggcaagggcattcgggtgctgggtgttgcctatgcaccc
agcagagacactccagttttctgcgctctgatcaacggggaaggggaggtggtcgacttc
ttgcgtctgccctactttatgaagaggaggaatgcctttagggaggacgagagagagaag
aaggcccacgacattgaaaatctcaagagatttctgtctagcaagaaacctcatgtggta
gctgttgctggggaaaaccgagatgctcaaatgatcatggaggacatcaagaggactatc
agcgagcttgagcaagagtcctctctgcccgctgtgggagtggaacttgtcgacaatgag
ctggccacactgtacatgaacagcaagaagtctgagaatgattttagggattaccctccc
ctgctgcgacaggctgtgtcgatagccaggaagatccaggatcccctaatagagtatgct
caggtttgcagctccgatgatgatattctctgcctcaaactacacccgctacaggaacat
gtggtgaaggaagatttgctctctgctctgtactgtgaattcatcaaccgtgtcaatgag
gttggagtggatgtgaacagggccatcgcccatcctcacactcagagcctggtccagtat
gtctgtggtcttggaccaaggaagggctcccacctgctcaagattctgaagcagaacaac
actcgtctggagaacagaacccagctggtcacaatgtgtcacatgggacccaaggttttc
atcaactgtgccggtttcatcaagatcgacacggcatccctcggggacagtacggactcc
tacatcgaggttctggatggatctcgtgttcaccctgagacatacgagtgggctcgcaaa
atggctgtggacgcccttgagtacgacgagtcggcagaagatgccaacccagcaggagcg
ctggaggagatcttggaaaatccagaacgcctcaaagatctggacctggatgcctttgct
gaagagcttgagagacagggttacggcaacaaggggattactctgtatgatattcgtgcc
gagctgagctgcagatacaaagacctgagagtgccctacagagtccccaacactgaggag
gtcttcaacctgctcaccaaagagactccagaaacgttttatattggtaagctgatcacc
agtgtagtaactggtatcgctcaccggcggcctcagggcgagagctacgaccaggccatc
cgtaacgattccacagggctgtggcagtgtcccttctgccagcaggacaacttccctgag
ctcagtgaggtgtggaatcactttgacagcggatcgtgtccaggtcaggccattggggtg
cgatccaggttagataacggcgtccagggattcattcccaccaagttcctcagtgacaaa
gtggtcaaacaccctgaggagagggtcaaggtgggcatgacagtccactgccgcatcatg
aaaatcgacattgagaaattcagcgtcgacctcacatgccgcacctcagatttgatggac
aaggccaatgagtggaagctccccaaggacagctactatgactttgacacagagtctgaa
gaccaaaaacaggaagaggagctcaaaaagaaacaacagcgaacaccatatataaagcgt
gtgatcgcccaccccaacttccacaatatcagtttcaaccaggcagagaaaatgatggag
acgttggaccagggagacttgatcatcagacccagcagcaagggagaaaaccacctcaca
gtcacctggaaagtggctgacggtatctaccagcatgtggatgtgagagaggaaggcaaa
gagaatgcatttagcttagggcacactctctggatcaataatgaggagtttgaagatctg
gatgaaatcactgctcggtacattcagccaatggcatcatttgcccgggatttgctggga
cataagtacttccaggactgcaaccagggaagcaaggagaaaatggaggacttactgatg
aggacaaagaaggagaagcctacttttattccttactttatttcggcatgtaaagatctg
ccaggaaaattcatcctgggttaccagcctcgtggaaaaccacgggttgagtatgtgacc
atcaccccggatggcttccgttaccgctcacagatatttcccacagtgaatggactgttc
cgttggtttaaggaccattaccaagagccggtgccaggcatcactcccagcaatagcagc
cgaacaaggacacctgcgtccctgaacgccaccccagccaatatcaacatcgcagacttg
acgcgagctgtcaacgccctcccacgcaacatgacttctcagatgttcagtgccatcgcc
gcagtcacaggccagggccagaaccccaacaccacccccgcacagtggggatccagccaa
tacggctacggtggtagcacaggaggaggcggagggagctcctctgcttatcatgtattt
gccacacctcagcaacccatggcgacgcccatgatgacgcccagctactcctacaccacg
ccgagccagcaggccttgggcacgccacagtacaccggctccaccccgcagtcctcccac
tctcacacccacgcccacccacatggaagccacgtgtcacaccacaaccatcatggccat
cacagcagtcaccatggccacgcgtccagcacgccgtcatcctcaacctcatcgagagga
cggactccacagcagcagcagcagcagcaggcgccaccaaaagccagcagcagcaacgcc
tctgcagtggactggggcaagatggcggagcagtggctgaaggaaaaagaagcggagggg
cggaagaaagcccagaggatgacgcctcgaccgtcgcccagccccatgatcgagagcaca
cccatgtccattgccggagacgccacacccctgctggatgaaatggaccgatag
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integrated database retrieval system
