Epinephelus lanceolatus (giant grouper): 117266958
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Entry
117266958 CDS
T07331
Name
(RefSeq) neuronal PAS domain-containing protein 3
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117266958
Transcription factors [BR:
ely03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117266958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
117266958
NCBI-ProteinID:
XP_033498302
LinkDB
All DBs
Position
15:complement(33584740..34055532)
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AA seq
1070 aa
AA seq
DB search
MIRIFPDFSVQVTASGAGGPGGGGGGGGGGMVTGPQVGRVPVPIPGATNGTPQSVQGITA
YQQSDPYWERPANAGSCSAARPKTLHLAGQQHTSSPWLQALRKEKSRDAARSRRGKENFE
FYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKAI
GTQRRRSPSAIASEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELT
GSSVFDYIHPGDHVEMAEQLGMKLPPGRGMSLSQGAVNEDGASSASSSSHSETPEPVESS
SPSLLAPDNTLERSFFIRMKSTLTKRGVHIKSSGYKVIHVTGRLRIRMALTHSRSVPNQI
MGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLKIVYCENRISDYMDLTPVDIVGKRCYQ
FIHAEDVEGIRQCHLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATISINAKNANEKNVIW
VNYVLSNPEYKDTPMDIAQLPNLPEKTSESSETSDSDSESKENSDNENAKSEGKPGHQSE
REDPETDSKRQQQPGQPHCSSEQEMKRQEEGDSSSNPESQDSDDSLEPSDGEGEEQEEAR
GGGGGGGGGGGGGGGRLGRLAGLGGLGGLGAIGGLGNLGGLHIKVEHYGEGEEVQLHNSQ
TSSSEEEEEEEDDDDEEEEDGGVQDCESANAGNKLQKRRKRRKVQKWDGSRSRRLRLSST
TPSPVAMGDTTPLVDPTQATPANSSHLLTSADSPNSANATSSVLKIKTEMAEPINFDNDS
SIWNFPPNREISRNESPYSMTSKPAAPGNHETFPSPQGGSLQVAIPDSVLTPPGTEGGAG
GVRKPPYNGSSAPSSASSAASLAPPSSASSADPLSPPLSASPRDKQQGTPTTSSSTSSSS
SSSSSTSSSSLLYSGDLEALQRLQAGNVVLPLVHRVTGTLASTSTTAPRVYTTGTIRYAP
ADVTLAMAQGNLLPNAAMNFVDGSGFGLDPKTPMEMLYHHVHRLNMSAAAAAGPFVGSPA
ATGGNNALGGQMTTAANVFTTAEGLFSTLPFPVYSNGIHTTQTTLERKED
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagcgtccaggtgacggcttcgggagccggaggaccc
ggtggcggaggaggcggcggaggcggtgggatggtgacgggaccccaggtgggtcgggtg
cctgtgccgatccccggagccacgaacgggaccccgcagagcgtgcaggggatcaccgcc
taccagcaaagtgacccctactgggagcggccggctaatgcaggcagctgctccgccgcc
cggcccaagacccttcacctggccggccagcagcatacctcctcaccatggctgcaggct
ctgaggaaggagaagtcacgggacgcggcgcgatcgcggcggggaaaggagaactttgag
ttttacgaactggccaagatgctgccgctgccgggcgccatcaccagccagctggacaag
gcctccatcatccggctcaccatcagctacctgaagatgagggacttcgccaaccaggga
gacccgccgtggaacctgcgcatggaaggaccaccgcccaacacctctgtcaaagctatc
ggcacccagcgaaggaggagtcctagcgccatcgcctcggagatcttcgaacctcacctg
ggcagccacattttacagtctctggacgggtttgtatttgcactaaacaaggagggacgc
ttcctctacatctctgagaccgtctccatctacctgggactgtcgcaggtggagctgacc
ggcagcagcgtcttcgactacatccaccccggcgatcacgtggagatggcagagcagctc
ggcatgaagctccctccgggccgagggatgtcgctgtcccagggagccgtcaacgaagat
ggggcatcctcagcttcttcatcgtcgcactctgagacacccgaaccagtggagtccagc
agtcccagtcttctggctcctgataacactctggaacgatccttctttatcaggatgaag
tcgacgctcacgaagagaggagtgcacatcaagtcctcaggatataaggtgatccacgtc
acggggcgtctgcgcatcaggatggctttgacgcacagccgctcggtgcccaatcagatc
atggggatggtggtggtggctcacgccctcccgccgccgaccatcaacgaagttcgcatc
gactgtcaaatgttcgtcacccgagtcaacatggacctcaagatcgtctactgtgagaac
aggatcagcgactacatggacctgacgccagtggacatcgtggggaagaggtgttaccag
ttcattcatgctgaagacgtggagggaatcagacagtgtcacctggacttgatgaataag
ggtcagtgtgtgacaaagtattaccggtggatccagaagaacggcggttacatctggatc
cagtccagcgctaccatctccatcaacgccaagaatgccaacgagaagaacgtcatctgg
gtcaactatgtcctcagtaatccagagtataaagacacgcccatggacatcgcccagctg
cccaacctgcctgagaaaacctctgagtcatccgaaacctcagactctgactctgagtcc
aaagaaaactctgacaatgagaacgccaagtccgaggggaagccaggccaccaatcagaa
cgtgaggacccagagacagacagcaagcgtcagcagcaacccggccaaccacattgctcc
tctgaacaggaaatgaagcgtcaggaggaaggagacagctcaagtaaccccgagagccag
gacagtgatgacagtctggaaccttcagatggagagggggaggaacaggaggaggcaagg
ggaggaggtggaggaggagggggcggagggggaggtggaggaggaaggttggggaggtta
gcaggactgggagggttggggggacttggcgccatcggaggactgggtaatctgggtggg
cttcatatcaaagtagagcactatggagagggggaagaagtacagctgcacaactcgcaa
acttcttcatcagaggaggaggaagaagaggaggatgacgatgacgaagaggaagaggac
ggtggcgtgcaggattgtgagagcgccaatgctggaaacaagctccagaagaggcggaag
agaaggaaagtgcagaaatgggacggatcccgaagtaggaggctccgtctctcctcaacc
acgcccagccctgtcgccatgggagataccacaccgctggttgaccccacgcaggccacg
cctgccaactcctcccacctcctcacctccgctgactccccaaacagtgcaaatgcgaca
tcctcggtcttaaaaatcaagacggagatggcagagccgatcaacttcgacaacgacagc
agcatctggaacttcccgcccaacagagagatttccagaaacgagtccccgtacagcatg
acctccaagcccgccgctccggggaaccacgagaccttcccctcaccccagggaggctct
ctccaggtagccattcccgactcggtcctcacccctcctggaactgagggaggagcagga
ggagtgaggaagcctccttacaatggtagctctgcgccatcctctgcttccagcgctgcc
agtttagcacctccctccagcgcctcctctgcagaccccctgtcccctcctctctccgcc
tccccgcgggacaagcaacaaggcactcccaccacctcctcttctacttcctcatcctcg
tcctcatcctcatcaacttcttcctcctcgctgctgtactctggtgaccttgaggcacta
cagcgtctgcaggctggtaacgtggtgctccctttggtccaccgggtcacagggactctg
gcctctaccagcacgacagctccacgggtctacaccaccggcaccatccggtacgcaccg
gcagacgtcaccctggccatggcccaaggcaatctcctccccaacgctgccatgaacttt
gtcgacggctcggggttcggtctggaccccaagacgcctatggagatgctgtaccaccat
gtccacaggctcaacatgtcagcagcggcagccgccggcccttttgtcggatctccggca
gccacgggtgggaacaacgccctgggaggccagatgacgaccgcagccaacgttttcacc
acagcggagggacttttctcaacgctaccgttcccggtgtacagcaacgggatccacacc
acgcagactactctggagaggaaggaggattaa
DBGET
integrated database retrieval system
