Epinephelus lanceolatus (giant grouper): 117267021
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Entry
117267021 CDS
T07331
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03013
Nucleocytoplasmic transport
ely03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117267021 (srrm1)
03015 mRNA surveillance pathway
117267021 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117267021 (srrm1)
03041 Spliceosome [BR:
ely03041
]
117267021 (srrm1)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117267021 (srrm1)
Spliceosome [BR:
ely03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
117267021 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
117267021
NCBI-ProteinID:
XP_033498477
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All DBs
Position
15:14137955..14149355
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AA seq
862 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKVDDDKKEKDKDIRERAQSKSPRRRKTRSPSPRRR
SPVKRERKRSASRSPRRKPSPVGSSSPPPPLMQLPTKPLEQLVEPDTLGRALPEPVIQET
SSTCDTVVEVVKADAVTEVKEPSPEKIHKKEERPRSREREKDSRRERPHHRSRSHSRTRR
RRSRSRSYSPRRRPSPRRRMSPRRRSPPRRGPTSSRHRHRRSPVRRRRSRSASSSGSSSS
GSRSPKKAMKRISNTPPRKQVHHPDNAISPAGKDRRSPSPRARRGRGSASPARLSGFKRK
QGGRSDSPPDNAKPRPSDGSDSEEDKNEKGATADSVQQRRQYRRQNRQSSSDTGSSSSED
EGPKRPTAGPGARNGDVRRRRSRTSSPRRRHRDASPRKRRSPSPGRRRRTPSPPRRRRSP
SPPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPLPPQKRKMSSSPTKRSSPGAKRRPSR
SPKRRSSPAQRRRASPSSSPPRHRRSPMLPSVRQSRDTRSPVAAASRLSPSPANRGRTVR
GSSSPQGRFETSSTSPSNQRRQQSPSHSGKPIRRVSRTPEPRNNQRPSPSPQPMRRASSR
SRSVSPPPAAQKRPAPASASPSPSRSASGSPPPAKKASSGSGSRSPSKNSDVDGSAKKKK
KKKEKKHKKEKKHKKHKKHKKEKSGSTVTADGQENQAVEEDGDSRKESDSEVEDSLDDLE
KHLREKALRSMRKAQMSPSQMS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggatttttccgcggcacaagtgcggagcaagacaaccgcttcagcaacaag
cagaagaagctgctgaagcagctaaagtttgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctggaagtcatcaaaccttggattactcagcgagtgacagagattctg
gggttcgaggatgacgtcgtcatagagttcatatttaaccagcttgaggagaagcacccg
gatagcaagatgatgcagatcaacctgacaggcttcctgaatgggaagaatgcccgggag
ttcatgagggacctgtggcccctgctgctgagtgcccaggagaacattgctggcatcccc
tctgcttttctggaacagaagaaagaggaaattaaacagagacagattgaacaggagaag
ctagcttcactgaagaaggtcgatgatgataagaaggaaaaggacaaggacatcagagag
agggcacagtcaaaaagcccaaggaggcggaagacaagatcgccatcaccacggcgaagg
tcaccagtgaagagggaaaggaaacgcagtgcctcgcgctccccaaggcgcaaacccagt
ccagttggtagcagttcaccccctccgcccctgatgcagctgcccacgaaacccttggag
cagcttgtggagccagacacattaggaagagccctgccagaaccagtcatccaagaaacg
tcttccacctgtgacacagttgtagaggtggtgaaagcagacgcagtgactgaagtcaaa
gaaccgtcgccagagaagattcacaagaaagaggaaaggcccaggtctcgggaaagggag
aaggacagcaggagggaaagacctcatcatcgttctcgttctcattcccgcactcgcagg
cggcgctcccgttccagatcctactcccctcgcagaagaccgagtccaaggaggaggatg
tctcctcgtcgaaggagcccccctagacgcggccccactagctccagacacagacataga
cgctcccctgtccgcaggaggcgctcccgttctgcttcctcctctggcagcagctcctcc
ggctctcgctcacccaaaaaagcaatgaaaagaatatctaatacaccaccccgaaaacag
gtccatcaccctgacaacgccatcagccctgcagggaaggacaggcggtcaccatctcca
cgggccagacggggtagaggctctgcatcaccagccagattatctggtttcaagcgaaaa
caaggaggaagaagtgattctccacctgataatgccaagcccagaccgtctgatgggtct
gattcagaggaggataaaaatgagaaaggggcaacagcagattcggtgcagcagcgacgt
cagtatcgcaggcagaatcgacagtcgtcttcagatacggggtcttcctcctcagaagac
gaggggcccaagaggccaacagcagggccaggtgccagaaatggggacgtcaggaggaga
cgtagtcgcacgtcctccccacggagacgacacagggacgcctctccaaggaaaagacgg
tctccatctcctgggcgcagacgtcgcaccccgtctcccccacgacgtcgcagatctccc
tctcctcctagacgaaggtctccctccccacctccccgtcgtcgttctccatcccccaga
cgatattccccccctatccagcgtcgctacagtccctcacccttgcccccacagaagagg
aagatgtctagctctcccacaaaacgctcttctccaggggccaagcgacgcccctccagg
tcccccaaacgcagaagctctcctgctcaaaggagacgcgcatctccatcctcatctcca
cccagacacaggaggagccccatgttgccttctgtcaggcaaagcagggatacaagatcc
ccagttgcagcagccagccgcctctccccgtcccctgcaaaccgcggtcgcactgttagg
ggttcctccagtcctcagggacgattcgaaacctccagtacatctccatctaaccagcga
agacagcagtccccctcacacagcggcaaacccatccgcagagtgtcccgcacaccagag
ccacgcaacaaccagagaccgtctccaagtccccagcccatgaggagagcatcctccagg
tccagatctgtttcccctccaccagcagctcagaaacgtccggcccctgcatctgcctcc
ccctcaccatctcgctcagccagtgggtctccgccaccagccaaaaaagccagcagtggt
tcaggcagtcggtccccaagcaagaattcagatgttgatggcagtgcaaagaaaaagaag
aagaagaaggaaaagaaacacaagaaagaaaagaaacataagaagcacaagaagcacaag
aaggagaagagtggcagcactgtgactgcagatggacaagaaaaccaggctgtggaggag
gatggagactctcgaaaggaatcagacagtgaagtagaggacagcttggacgacctggag
aagcacctgcgagagaaggcgctgcgctccatgaggaaggcccagatgtctccgtcacag
atgtcctga
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