Epinephelus lanceolatus (giant grouper): 117267032
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Entry
117267032 CDS
T07331
Name
(RefSeq) afadin
KO
K05702
afadin
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04517
IgSF CAM signaling
ely04520
Adherens junction
ely04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117267032
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117267032
04530 Tight junction
117267032
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DIL
PDZ
RA
PDZ_6
PDZ_2
RA_3
RASSF8-10_RA
V_ATPase_prox
Motif
Other DBs
NCBI-GeneID:
117267032
NCBI-ProteinID:
XP_033498510
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All DBs
Position
15:27045449..27065263
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AA seq
1237 aa
AA seq
DB search
MPEEEEREKLAQVIRQWNNNRLDLFEISQPDENLEFHGVMRFYFEDHVGGNVATKCLRVG
SNSSTHEVIDTLSEKFRPDMKMLTTSYSLYEIHANKERKLDLDERPLVVQLNWNTDNREG
RFVLKKDGESLEENCHEKEKGGVIQSFKRTLSRKEKKKEKNKTKATDKVSEDENGSTEKL
LNNNNSICVSNHERKKNCTENKNQQKQAAPGGKTGSLFPDFSDQPGLPIGIKCCDNSEEA
FLSAVINYTNSSTVHFKLSPAYILYAVGRFALQRHYRRGSPPSGQTLSVTSITNKMVAMT
EKVIQRQQAIAGALAFWMANSSELLNFLKHDKDLSSLTQQSQLDLSHLVHKAYSYLLQCL
QSELRKHLPTFLIDPEQHGALPAGIEMVLNTLMNTMSLLRRCRVNPALTIQLFSQLFHYI
SVWLFNQLMSPEADTPGLCSHYWGAALRQRLTAIEAWAERQGLELAADCHLGHIIQATTL
LTMNKYSMQDVKAIHNTCFKLNSLQLQTLLSGYLYATNEPHIPSDLIDAVATAAEASADN
LIRSEGRDIQMEESLDLHLPFLLPEGGYSCDTVKGIPPGFREFLEPICRKGLCSLTSQPN
SKGDWTVHFSEPTYAESTYLAAHGEPDIVTITLNKPLNSGMGVSIVAAKGAGQGNLGIYI
KSIVKGGPAEMNGRLTAGDQLLSVDGQSLVGLSQERAAAIMMQTGPVVTLQVAKFGASYH
GLGALLSEPTPDRTTGDNSHPKPNGKALMLYSVVDPGLSDQLHGGSRRKKEQMMQRNRQL
YRSNPNVTDFSPEDKDEPGDPVVRGNNMAAVSSVNLCADTCHREYLTLPNPKSQDKNLSD
SSRTQHTLKVSLRPLDGQSSSKRTFMRQALSQENLCVDSGGPLLDKSQNMWEQKMQRAKQ
TMSHYSSFPLRSSVSTHDILSDNCSPTKQQQGSRTSGAGVWRTPFSQHPTPTPSNQPVRI
DIPVTRAVNAHTNPPLTTFQSSSLLAVRMSQTLKLNGSKNSHVYACPITAVKKLPHTSHL
SSQQRSTTPRDQAAKPQVSITPTKHVSFQEPPTQQKQGSAPTKPRDPRELCDPWRREAQE
KLEEQQRLHVVQLLEQEVQELQGKARRTAEENDRLRRLSLEWQFQKRLQEIQQRGEDEEE
DEDLDMMVTIQQLERRTQTRRNSAGNTELKELEKQAGTHPSQQEDKTRTDQRRSGRSQDF
NNMAAKESQEEKIKRASAPEKLTFKERQRLFSLASSA
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggaggaagaacgagagaaattagcccaagtcatcagacagtggaacaacaac
agactggacttgttcgaaataagtcaacctgatgagaacttggagtttcatggtgtgatg
cgcttctactttgaggatcatgttggaggaaatgtggccacaaagtgcttgcgtgttggc
agcaactcttcgactcacgaggttatcgacactctttcagagaagttcaggcctgatatg
aagatgctgactacaagttattccctgtatgagattcacgccaataaagaacgtaaactg
gatctggatgagaggcctttggttgtacaattaaactggaacactgacaacagagaggga
cgttttgtgctcaagaaagacggggagagtttggaggaaaactgtcacgagaaggaaaaa
ggaggcgtgatccaaagcttcaagaggacactgtcaagaaaagaaaagaagaaagagaag
aacaaaactaaagcgactgacaaggtttcagaggatgagaatgggtcaactgaaaagcta
ctgaacaacaacaacagcatttgtgtgtctaaccatgagaggaaaaagaactgcacggag
aacaaaaatcaacaaaagcaggctgccccgggaggaaagacaggaagtctttttccagac
ttttcagatcaaccaggattaccaattggaattaaatgctgcgataactctgaggaagcc
ttcctgtctgcagtcataaattacaccaacagctccacagttcatttcaagctctcacct
gcatacatcctctatgctgtgggacgctttgctctgcaacgccattacaggcgaggctct
ccaccctcggggcagacactcagcgtaacttcgatcacaaacaaaatggtggccatgaca
gagaaggtcatccagagacagcaggccatcgccggggctcttgccttttggatggcaaac
tcctctgagctactgaacttcctcaagcatgacaaagacctcagctcgctcacacaacaa
agtcagctggatctgtcccacctggtgcacaaagcttacagttatctgctacagtgtcta
cagagtgaattaaggaagcacttgccaacttttctgattgaccctgagcaacatggtgcg
ctgccagctggtatagagatggtgctcaacaccttgatgaacaccatgtctctattacgc
cgctgtcgggtcaaccctgccctcaccatccagctcttctcccaactcttccattacatc
agtgtctggctcttcaaccagctgatgagcccagaggccgacactccaggcctgtgctca
cactactggggagctgctctccgccagaggctcacagccatcgaagcttgggcggagagg
cagggcctggagctggctgctgactgccacctcggacacatcatccaggcaaccacgctc
ctgaccatgaacaagtactcaatgcaagacgtgaaggctatccacaatacctgtttcaag
ttgaactcactgcagctgcagacgttgctatccggctacctctatgcaaccaatgaacct
cacatcccctcagatttgatcgatgctgtagcgacggctgcagaggcctcggcagataac
ctgattcggagcgaaggacgggacatccagatggaggagagccttgacctccacctgccc
ttcctgttgccggagggaggatactcctgtgacactgtgaaaggaatccctccagggttt
agggagtttttggagccgatttgccggaaaggtctctgctctttgacatcccagccgaac
tccaaaggtgactggactgtgcacttcagtgaaccaacttatgcagagagcacatacttg
gcagcacacggagagccagacattgtgacgatcacactgaacaaacctctgaacagtggg
atgggggtcagcattgtggctgccaagggagcggggcaaggcaacctcgggatttatatc
aaatctattgtcaaaggaggaccggctgaaatgaacggcaggttaacagctggggatcag
ctgctgagtgtggacggtcaaagtctggtcggcctcagccaagaaagggcagcagccatc
atgatgcaaaccggccccgttgtgaccttgcaggttgcaaagtttggagcaagttaccac
ggccttggagctctgctgagtgagccgacccccgacaggactacaggcgataacagccac
cctaagccaaatggcaaagcactgatgctgtacagtgttgtggatcctggcctgtcagat
cagctccatggaggcagcagaaggaaaaaagagcagatgatgcagagaaacagacaactg
tatcgctccaaccccaacgtgacagatttctcccccgaggataaagatgaacctggtgac
cctgttgtgagaggaaacaacatggctgctgtctccagtgtcaacctttgtgctgataca
tgtcacagggaatacttgacactgccgaaccctaaatcccaggacaagaatttatctgat
tccagtcgaacacagcacacactaaaagtgtctttgaggcctttggatggacagagctcc
agtaagaggaccttcatgcgccaggctctgtcacaggagaacctatgtgtggacagtgga
ggccccctgctggacaaaagtcagaacatgtgggagcagaagatgcagcgtgcaaagcaa
acaatgagccactattcatcttttcctctccgctcaagtgtttccactcatgacatcctc
tcagataattgttctcctacaaaacagcagcagggcagtcgtacaagtggagccggtgtc
tggagaactcctttctcacaacatccaacaccgacgccatccaaccagccagtacgcata
gacatccctgtgaccagagcggtgaacgcacacacaaatcctcctctcaccaccttccag
agttcatctctgctggctgtgaggatgagccagacccttaaactaaatggaagtaaaaac
agtcatgtttatgcctgtcccatcactgcagtgaagaagctgcctcacacctcacatttg
tcatcacagcagagatccaccacacccagggatcaagctgcaaagccccaagtaagcatc
actccaacaaaacacgtctccttccaagaacctcccactcagcagaagcagggatcagct
cctacaaagcccagagaccctcgggagctgtgtgacccctggaggagggaggcccaggag
aagctggaggagcagcagaggctccatgtggtgcagctcctggagcaggaggtgcaggag
ctccagggtaaagccaggcgcacagcggaagagaacgaccggctccgaaggctcagcctg
gagtggcagtttcagaagaggctgcaggagattcagcagagaggagaggatgaggaggaa
gatgaagatttggacatgatggtgacgatacagcagctggaaagaagaacacagaccagg
agaaactctgctgggaacaccgagttgaaagagttggaaaagcaggcgggaactcatccc
tcccaacaggaagacaaaactaggacagatcaaagaagaagcggacggagtcaggacttt
aacaacatggcagcaaaagaaagccaggaggagaaaatcaagagagcgtcggctcctgag
aagctcacattcaaggagcgtcagcgtctcttctctctggcgtccagtgcttaa
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