Epinephelus lanceolatus (giant grouper): 117267256
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Entry
117267256 CDS
T07331
Symbol
actn1
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04510
Focal adhesion
ely04517
IgSF CAM signaling
ely04518
Integrin signaling
ely04519
Cadherin signaling
ely04520
Adherens junction
ely04530
Tight junction
ely04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117267256 (actn1)
04518 Integrin signaling
117267256 (actn1)
04519 Cadherin signaling
117267256 (actn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117267256 (actn1)
04520 Adherens junction
117267256 (actn1)
04530 Tight junction
117267256 (actn1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117267256 (actn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117267256 (actn1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ely04812
]
117267256 (actn1)
04147 Exosome [BR:
ely04147
]
117267256 (actn1)
Membrane trafficking [BR:
ely04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117267256 (actn1)
Cytoskeleton proteins [BR:
ely04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117267256 (actn1)
Exosome [BR:
ely04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117267256 (actn1)
Exosomal proteins of colorectal cancer cells
117267256 (actn1)
Exosomal proteins of bladder cancer cells
117267256 (actn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
EF-hand_5
XisI
Motif
Other DBs
NCBI-GeneID:
117267256
NCBI-ProteinID:
XP_033498925
LinkDB
All DBs
Position
15:35054767..35145064
Genome browser
AA seq
890 aa
AA seq
DB search
MDQYDGDQDYMQQEDDWDRDMLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDG
LKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNAKM
TLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCAL
IHRHRPELIDYGKLRKDDPMTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYV
SSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRLP
ENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVS
DINNAWGNLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHEAWTEGKEEMLQKRDY
ETASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQRICDQ
WDTLGALTQKRSEALQRTEKLLETIDQLYLEFAKRAAPFNNWMEGAMEDLQDTFIVHTIE
EIQGLSTAHEQFKATLPEADKERQAILGIHNEIAKIVQTYHVNIAGTNPYTTINPQEINA
KWDKVRQLVPQRDQALIEEHARQQNNERLRRQFANQANVIGPWIQTKMEEIGRISIEMHG
TLEDQLTHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLT
TIARTINEIENQILTRDAKGISQEQLNEFRASFNHFDRDHSGTLGAEEFKACLISLGFDI
ANDAQGENEFSRIMSIVDPNRMGIVTFQAFIDFMSRETADTDTADQVMASFKVLAGDKNY
ILADELRRELPPDQAEYCIARMAPYTGPDGVPGALDYMSFSTALYGESDL
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtatgacggagaccaagactacatgcagcaggaagatgactgggatcgggat
atgctcctggatcctgcatgggagaagcagcagagaaagacattcacagcttggtgtaac
tctcacctgaggaaagcaggaacgcagatcgagaacatcgaggaggacttccgggatggg
ctgaaactcatgctgctgctggaggtcatctcaggcgaacgcttggccaaaccagaaaga
ggcaagatgagagtccacaagatctccaacgttaacaaagcactcgacttcatcgccagc
aaaggagtgaagctggtgtctatcggcgcagaggagatcgtagatggcaacgctaagatg
accctgggaatgatctggaccataatcctccgcttcgccatccaagacatttctgtggaa
gagacatctgccaaagagggcctcctgttgtggtgccagaggaagactgcgccctacaag
aatgtcaacatccagaactttcacatcagctggaaagatggtttgggtttctgtgcgctc
attcatcgacaccgtccagagctcatcgactatggaaaactgcgcaaggacgatcccatg
accaacctgaacacagccttcgacgtggcagagaagtacctggacatccccaagatgttg
gacgcagaagacattgtgggcactgcccgtccggacgagaaggcgatcatgacctacgtc
tctagcttctaccacgccttctcaggcgcccagaaggcagagacagcggccaacaggatc
tgcaaggtgctggctgtcaaccaagagaatgagcagctgatggaagactatgagaagctg
gccagcgatctgctggagtggatccgtcgcaccatcccctggctggagaaccgcctgccg
gagaacaccatgcaggccatgcagcagaagctggaggacttcagagattaccgccgcctc
cacaagccgcccaaagtgcaggagaagtgccagctggagatcaacttcaacaccctgcag
accaagctgaggctcagcaacaggcccgccttcatgccctcggagggaaagatggtctcg
gacattaacaatgcatggggaaacctggagggagcagagaagggctatgaagagtggctc
ctcaatgagattcgcaggctggaaagactcgaccacctggcggagaaattccgccagaaa
gcagccatccatgaagcctggactgaaggtaaggaggagatgctgcagaagcgtgactat
gagacagcctctctgtcagagatcaaagccctgctgaagaaacacgaggcctttgagagc
gacctggctgcacatcaggaccgtgtggagcagatcgctgccatcgcacaggagttaaat
gagctggactactacgactcccccagtgtaaacgctcgctgccagcggatctgtgaccag
tgggacaccctgggagctctgacccagaaacgcagcgaggctttgcagagaactgagaag
ctgcttgaaaccatcgaccagctgtaccttgagtttgccaaaagggcggctccgttcaac
aactggatggagggcgccatggaggacctgcaggacacctttatcgtccacaccatcgaa
gaaatccagggattaagcacagcccacgagcagttcaaagccacgcttccagaggccgac
aaagagcgccaggccatcctgggcatccacaatgagattgccaagattgtgcagacctat
catgtgaatatcgccggcaccaacccgtatactaccatcaacccacaagagatcaatgcc
aaatgggacaaggtcagacagctggtgcctcagcgcgaccaggctctgattgaggagcac
gcccggcagcagaataacgagcgtctgcgccgacagtttgccaaccaggccaatgtcatc
gggccctggatccagaccaagatggaggaaatcggccgcatctcaatcgagatgcacggc
accctggaggaccagctgacacacctacgccagtacgagaagagcatcgtcaactacaag
ccaaagatcgaccagctggagggagaccaccagctcattcaggaagctctcatctttgac
aacaagcacaccaactacaccatggagcacatccgcgtgggttgggagcagctactcacc
accatcgctcgtaccatcaacgaaattgagaaccagatcttgacgcgagacgccaagggc
atcagccaggagcagctgaacgagttccgggcttccttcaaccacttcgacagggaccac
tcgggcactctgggcgcggaggagttcaaggcctgcctgatcagcctgggcttcgatatc
gccaacgatgcacagggtgagaacgagttctcccgcatcatgagcatagtggatccaaac
cggatgggcatcgtcaccttccaggccttcatcgacttcatgtcccgcgagacggccgac
acagacactgccgaccaagtcatggcctccttcaaagtcctggcaggagacaagaactac
attttagccgacgagctgcgccgggagctgcctccagaccaggccgagtactgcatagcc
cgcatggccccctacaccggccccgacggcgtgcccggagccctcgactacatgtccttc
tctacggctctgtacggagagagcgacctctga
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