Epinephelus lanceolatus (giant grouper): 117267566
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Entry
117267566 CDS
T07331
Symbol
shprh
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117267566 (shprh)
Enzymes [BR:
ely01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117267566 (shprh)
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117267566 (shprh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
PHD
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
TPR_10
DUF2089
TPR_12
SAMD1_WH
Motif
Other DBs
NCBI-GeneID:
117267566
NCBI-ProteinID:
XP_033499428
LinkDB
All DBs
Position
15:complement(26498726..26516198)
Genome browser
AA seq
1481 aa
AA seq
DB search
MQKRRVVQLCHQERDGSVKVGIYLMETGLGKPEFLSEGNARMKKANQLMQKLMEYFYDFI
IPEVVENDEEECDTDLERQNVEELYDYVRHLHQRESVEVTYDVQHKALIPVLRRYQSQAV
NWMLQREKYRNTSPKEQTLHFLWRELITLCGKKLFYNPFTGCLIREFPLAGVEWPGGILA
DEMGLGKTVEVLALILFHTRQDLEQEALTLPVGKSVNYFVPPPPLERKKVNRCKSEVQPK
MKVSYPTVRIMLLTAIKEMRSGKGASVNAIFTYIRATYGYDLLKNRNHIRKTLAKLIDEG
LVDRVKGRGLAGSFKLGKNYKETKKMLAGASKFTCKSTESTPRKMFQRRAKEKAEAALQN
SLLTEDQRDQSSPTMECLVPEETAAKKEWDESVRKKAEQSDSMLDTLTLQMSQDKSESDT
QDLPRMGDLPEERGEADLQEIETPTRASVIPFNTQDYRFECICGELGIIDYKARVQCMNC
QLWQHADCVNYKEESLETTPFYCPHCLVAMKPVSTGATLIISPSSICHQWVEEINRHIRS
SSLRVLVYQGVKKHGFIQPHMLAEQDVVITTYDVLRSELNYVDIPHSNSKDGRRFRNQKR
YMAIPSPLVAVEWWRICLDEAQMVECPTAKAAEMALRLASVNRWCVSGTPVQRGLEDLYG
LVLFLGVDPYWVKHWWDQLLYRPYQRGNTEPLYHVIAQLLWRSAKKDVIDQIQIPPQTEE
VHWLHFSPVEGHFYHRQHEVCSQDALVKLRKISDWSLKLGSLDRRTVHTILCPLLRLRQA
CCHPQAVRGEFLPLQKSTMTMEELLKSLQKKCRVECEEAHRQLVCALNGLAGIHIIRNEF
VEAVEMYREVLRSSEEHKGRLKTDSLQRLHATHNLMELLSAKHPGIPPTLRDDRLSEEAE
QLRQHYMTKYDSEVADAHQALQPVLQNIKELKRKVNLNAPWWLDVVQRAIRCSTDDDLVS
RIKNELTSSYKQQANKLTMADKFRDACGLQFLLTTQMEDLVKSQKTVRDAVKSLEGPASQ
KVIDEVTICHLRPMRLPLNNCVFCKADVLFIDYESKLFSHTVKGQTAIFEEMIEDEDGLM
DDRLPTTSRGLWAASETERSLKAILSFAKAKRMDPELVEEGNTFMELFENWKKEYKVLHE
YWMVLRNHVSAIDELGMATERLRVRLPDEPKPKLLHIIEPHEVEQNRVKLLNDQAVAKSQ
LQKKLGQYLYLTNLEKSQDKSTGGLNPEPCPICARPLGQEWAVLTCGHCFCNECIAIIVE
QYSVGSRRRAIKCAICRQTTSHTEISYVFTTQSSSQDQDIPVKGSHSTKVEAVVRTLKKI
QVTDPGAKCLVFSTWLSVLDIIAKALFDNNMEFSQINGIHKFQENLCSFKYEEKINILLL
PLHTGSNGLNIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTFVHRFLIKSTIEERM
QAMMKTAEKSHTSTTMKHSEASVLTVADLADLFTEDTEHLE
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaggagggtggtgcagctctgccaccaggaaagagacggctcagtcaaggtc
gggatttacttaatggaaactgggctcgggaagccagagttcctcagcgagggcaacgct
cggatgaagaaagccaatcaactaatgcagaagttaatggagtacttttatgattttatt
atccccgaggttgtagagaatgatgaggaggaatgtgacaccgacctggagaggcaaaat
gtcgaggagctttatgattacgtcaggcacctgcaccagagagagagcgtggaggtgacc
tacgacgtccagcacaaagctctcattcctgtgctgagacggtatcagagccaggccgtc
aactggatgctgcagagagagaaatacaggaacacttcacccaaagagcaaacgctgcat
ttcctctggcgggagttgatcaccttgtgcggcaagaagttgttctacaacccttttact
ggctgcttaatccgagagtttccgctggcgggtgtggagtggcctggtgggatcttggcc
gatgaaatggggctgggaaagacagtggaagttctggctctcatcctgttccacacacga
caggacctggagcaggaagccctcaccctgcctgtgggaaaatccgtaaattatttcgta
cctcctcctccccttgaaagaaagaaagttaaccgctgcaagtctgaagttcagcctaaa
atgaaagtgtcctacccaactgtgcgcatcatgctcctcactgcaatcaaggagatgaga
tctggcaaaggagcctccgtcaacgctatcttcacctacatccgtgccacttacggctat
gacctcctgaaaaaccgcaaccacatcaggaagacgctggcgaagctgatagatgaaggc
ctggtggaccgggtcaaaggtcgcggcctggcagggtcattcaaactgggaaagaactac
aaagaaacaaagaagatgttagcaggagcatccaagtttacttgcaaaagtacagagagc
acgcccaggaaaatgtttcagagacgagccaaagagaaagcagaggcagctctgcaaaac
tctcttctaacagaagatcaaagagatcagtcctcccctacaatggagtgtctggtacca
gaggagacagcagcaaagaaggaatgggatgaaagtgtgaggaagaaagcagaacagtcc
gacagcatgctggatacattaaccttacagatgtctcaggataaaagtgagtcagataca
caggacttgcccagaatgggtgatctacctgaagaaagaggagaagctgacctacaggag
atagaaacccccaccagagcgtctgttatcccgttcaacacccaggactaccgctttgag
tgcatctgtggtgagctgggcattattgactacaaggcccgtgtccagtgtatgaactgc
cagctttggcagcatgcagactgcgtgaactacaaagaagagagccttgaaacgacacct
ttctactgccctcactgcctggttgctatgaaacccgtctccaccggtgctaccctcatc
atctccccgagctccatctgccaccagtgggtggaggagatcaaccggcacatcaggtcc
tcctcactgcgagtgctggtctatcagggtgtgaagaagcatggattcatccagccacat
atgctcgctgagcaggatgtggtcatcaccacctacgacgttctacggtcggagctcaac
tacgtcgacattccccacagtaacagcaaggacggacgccgctttcgcaatcagaagcgc
tacatggccatacccagtcctctggtggcggtggagtggtggcgcatctgtctggacgag
gctcagatggttgaatgtcccactgcgaaggctgcagagatggctctacgtctcgcatct
gtcaaccgctggtgtgtcagtggcacccctgtgcagagaggcctagaagatctgtacggc
cttgtactattcctgggagttgacccatactgggtgaaacactggtgggaccagctgctc
tatcgcccttatcagcgtggaaacactgagccgctgtaccatgtaatcgctcagttattg
tggcgatcagccaaaaaagacgtcattgatcagatccagattccccctcagacagaggag
gtgcactggctgcacttctcccccgtcgagggtcacttctaccaccgccagcacgaggtc
tgctcccaggacgctctggtcaaactcaggaagatctctgactggagcctgaaacttggc
agcctcgaccgccgcaccgtccacaccatcctgtgcccgctgctgaggctgcgacaggcc
tgctgccatccccaggctgtgaggggggagttcctgcctctgcagaaaagcaccatgacg
atggaggagctcctgaagtccctgcagaagaaatgtcgagtggagtgtgaagaagcccac
agacaattggtgtgcgcactcaacggcctggctggaatccacatcatcagaaatgagttt
gtagaggcggtggagatgtatagagaagtgcttcgttcatcagaggagcacaaaggccga
ctgaaaacagattcattgcagaggcttcatgctacccacaatctgatggaactgctgagc
gcaaagcatcctgggatacctcccacgctgagagatgaccgactaagtgaggaggcggag
cagctccgacagcactacatgaccaaatatgactctgaggtagcagatgcccatcaggct
ctgcagcccgtgcttcagaacatcaaagagctgaagcgcaaagtcaacctgaacgctccc
tggtggctggatgttgtccagagggcgatccgctgctccactgacgacgatctcgtgtcc
cgcatcaagaacgagttgacgtccagctacaaacaacaagccaacaagctcaccatggca
gacaagttccgtgatgcctgtggtctgcagttcctgctcaccacacaaatggaagatctg
gtgaaatcccaaaagactgtgcgagacgcagtgaagagtctcgaaggtccggcgtcacag
aaagtgatcgatgaggtcactatttgtcatctcaggccgatgagactaccgctcaataat
tgcgtgttttgcaaagcagatgtactcttcattgattatgagtccaagctgttttctcac
acggtgaagggtcagacggccatctttgaagaaatgattgaagatgaagacgggctgatg
gacgaccgtctccccaccaccagcagaggtctgtgggcagccagtgagactgagcgctct
ctcaaagccatcttgtcttttgccaaagctaaacgcatggacccggagctggtggaggag
ggcaacactttcatggagctgtttgagaactggaagaaagagtacaaggtgctgcatgag
tactggatggtgctgaggaatcacgtgtcggccatcgatgagctgggtatggccaccgag
agactacgtgtgcgtctgcccgatgaaccgaagccgaaactgctgcacatcatcgagcca
catgaggtggagcagaacagagtgaagcttttgaacgaccaggcagtggccaagtctcag
ctccaaaagaagctcggccagtatctgtatctcacaaatctggagaagtcccaggataag
tctactggtgggctgaacccagagccatgtcccatctgtgcccggcccctgggacaggag
tgggcagtgctgacctgtggacactgcttctgcaacgagtgcattgctatcattgtggag
cagtacagcgtgggctcgaggcgacgggccatcaaatgtgccatctgtaggcagaccaca
tcacacacagaaatatcctacgtgtttaccacccagtcgtccagtcaggaccaggacata
ccggttaagggaagccactctaccaaagtggaggcagtagtgagaacgctgaagaagatt
caagtgaccgacccgggggccaagtgtctcgtcttctccacgtggctgagtgtcctggac
atcattgctaaggccttgtttgacaacaacatggagttctctcaaatcaacgggattcac
aaattccaggagaatctgtgctccttcaaatacgaagaaaagatcaacatccttctcctt
cctctccacaccggctccaatggtctgaacatcatcgaagcgactcacgtgttactggtg
gagccaatcctcaacccagctcacgagctccaggccatcggcagagtgcaccggattgga
caaaccaagccgacatttgttcacagattccttattaaatccaccattgaagagagaatg
caggcgatgatgaagacagcagagaaaagtcacaccagcacaaccatgaagcactcggag
gcgtctgtactgacagtagcagacctggcggatctgtttactgaagacacagaacatctg
gagtga
DBGET
integrated database retrieval system
