Epinephelus lanceolatus (giant grouper): 117267788
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Entry
117267788 CDS
T07331
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03082
ATP-dependent chromatin remodeling
ely03083
Polycomb repressive complex
ely04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117267788
03083 Polycomb repressive complex
117267788
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
117267788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ely03036
]
117267788
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
117267788
Histone modification proteins
HAT complexes
HATB complex
117267788
HDAC complexes
Sin3A-HDAC complex
117267788
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
117267788
PRC2.2
117267788
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
117267788
Heterochromatin formation proteins
Other heterochromatin formation proteins
117267788
Chromatin remodeling factors
NuRD complex
117267788
NuRF complex
117267788
NuRF complex (fruit fly)
117267788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
MIOS_WD40
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
117267788
NCBI-ProteinID:
XP_033499731
LinkDB
All DBs
Position
1:52271892..52281817
Genome browser
AA seq
427 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY
AVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNHCIIATKTPTSDVLVFDYNKHPTKPDPSGECNPDLRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNTTSKASHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDNTPAS
ELEAQGS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagaggtgtatgacgatgcagtggaagagagggtcatcaatgaggagtac
aagatatggaagaaaaacacacctttcctgtacgacctggtgatgactcatgctctggag
tggcccagccttactgtccagtggctcccagatgtcagcaggccagaggggaaggactac
gccgttcacaggctggttttggggacccacacatcagatgagcagaaccaccttgtgatt
gccagcgtccaggtaccaaacgacgatgcccagtttgatgcttcacactacgacagcgaa
aaaggagcagagtttggtggctttggctccgtaagtggaaaaattgagatcgagatcaag
atcaaccacgagggagaggtcaaccgagcccgctacatgcctcagaatcactgcatcatt
gccaccaagactcccacctctgacgtgctggtcttcgactacaacaagcacccgactaag
ccagatcccagtggggagtgtaatcctgacttaaggctgaaaggccaccagaaagaaggg
tacggcctctcctggaacccaaacctcagcggcaacctgctcagtgcctccgatgaccat
accatctgtctatgggacatcggggccggcccaaaggaaggaaagattgtggatgccaag
accatcttcaccggccacacagcagtggtggaagatgtttcttggcatttgctccacgaa
tccctgtttggctctgtggctgatgaccagaagctcatgatatgggacacccggtccaac
accacatccaaagccagccactcagtcgacgctcacactgctgaggtcaactgtctgagc
ttcaacccctacagcgagtttattcttgccactggttctgctgataagactgttgctctg
tgggacctgaggaacctcaaactgaagcttcactcctttgagtcgcacaaagatgaaatt
ttccaggtacaatggtctcctcacaatgagacgatcctggcctccagcggcaccgaccga
cgtctcaacgtttgggacctcagtaaaattggggaggagcagtcagcagaagatgctgag
gacggcccaccagagctgctgttcatccacggtggccacacagccaagatctctgacttc
tcctggaaccccaatgaaccctgggtcatctgctcagtgtccgaggacaacatcatgcaa
gtctggcagatggcggaaaacatctacaatgatgaggagccagacaacacccctgcatca
gagctggaggctcagggatcctaa
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