Epinephelus lanceolatus (giant grouper): 117267919
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Entry
117267919 CDS
T07331
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely00260
Glycine, serine and threonine metabolism
ely00630
Glyoxylate and dicarboxylate metabolism
ely00670
One carbon pool by folate
ely01100
Metabolic pathways
ely01200
Carbon metabolism
ely01230
Biosynthesis of amino acids
ely01240
Biosynthesis of cofactors
ely04981
Folate transport and metabolism
Module
ely_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
117267919 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
117267919 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
117267919 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
117267919 (shmt1)
Enzymes [BR:
ely01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
117267919 (shmt1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
117267919
NCBI-ProteinID:
XP_033499881
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Position
16:35154921..35164061
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AA seq
482 aa
AA seq
DB search
MSLTNGHTVSKETWDSHNKMMLEPLSISDSEVFSIIKKEKHRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEAYCLDSEKWGVNVQPYSGS
PANFAVYTAVVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGYI
DYDRLQENARLFHPKLIIAGTSCYSRNLDYGRLKQIANENGAYLMGDMAHISGLVAAGVV
PSPFEHCDIVSTTTHKTLRGCRAGLIFYRKGVRSVDAKGKETLYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMTPEFKAYQLQVLANCKAMSSALIDHGYKIVTGGSDNHLILLD
LRSKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGLVEEDFKKVA
GFINRGIELTLEIQRSLDPKATLKEFVQALSQGEKFQKRVSEIRLEVEAFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgacaaacggccacactgtgagcaaagaaacatgggactcccacaacaagatg
atgctggagcctctgtccatcagtgactctgaggtgttctcaatcataaagaaagagaag
cacaggcagacgtacggtctggagctgatagcgtccgagaacttcgccagcagagctgtg
ctagaggctttgggttcctgtatgaacaacaaatactctgaggggtatcctggtcagagg
tactatggtggcacggagcatgtcgacgagctggagcgactctgtcagaagagggcgctg
gaggcctactgtttggactcagagaaatggggtgtcaatgtgcagccatactcaggttca
cctgctaactttgctgtctacacggctgtggtggagccccacggcaggatcatggggctg
gaccttcctgatggaggtcaccttacacacggcttcatgactgagaagaaaaaaatctcc
gcaacgtccatcttcttcgagtccatgccgtataaggtgaatccagaaactggctacatc
gactacgacagactgcaagaaaacgctcggctgttccaccccaaactcatcatcgcagga
acaagctgctactcccgcaaccttgactacggccgcctgaagcagatcgctaatgagaat
ggtgcatatctgatgggagacatggctcacatcagtggactggtggctgctggagtcgtg
ccctcgccatttgagcactgtgacattgtttccacgacgacacacaagacgctgcgtggc
tgccgcgctggactcatcttctacaggaaaggtgtgcgaagtgtggacgccaaggggaag
gagactctgtataacttggagtctttgatcaaccaggctgtgtttcctggactgcaggga
ggaccacacaatcacgccatcgcaggtgttgctgtcgcactcaaacaagccatgacacca
gagttcaaggcctaccagctgcaggtcctcgctaactgcaaagctatgtccagcgctctt
attgaccacggctacaagattgttactggcggatctgacaaccacctgatcctgctggat
ctgcgcagcaaaggaactgatggagggcgagctgagaaggttctggaagcctgtgccatt
gcttgtaataagaacacctgtccaggggataagagtgctctgcgcccgagtggtctgagg
tttggctctccagctctgacctccagaggcctggtggaggaagacttcaagaaggtggct
gggttcattaacagaggtatcgagctgaccttggagatacagagaagcctggatcccaag
gccactctgaaggagtttgttcaggcactgtctcagggagagaagttccagaagcgggta
tcagaaatcaggttggaggtggaggcctttgccggtcagttccccatgcctggcctacct
gagctgtag
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