KEGG   Epinephelus lanceolatus (giant grouper): 117267958
Entry
117267958         CDS       T07331                                 
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
ely  Epinephelus lanceolatus (giant grouper)
Pathway
ely03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ely00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117267958 (thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ely03019]
    117267958 (thoc6)
   03041 Spliceosome [BR:ely03041]
    117267958 (thoc6)
Messenger RNA biogenesis [BR:ely03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     117267958 (thoc6)
Spliceosome [BR:ely03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    117267958 (thoc6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML_2 WDR55 Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_2nd EIF3I Beta-prop_SCAP NBCH_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_NOL10_N WD40_like Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_IP5PC_F Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C WDR54
Other DBs
NCBI-GeneID: 117267958
NCBI-ProteinID: XP_033499938
LinkDB
Position
16:41578090..41581477
AA seq 323 aa
MGPVELLHMSVFSQSFSPCGRFLAAGNNYGEIAVFSLSAALSPDATALSQKPVLTFTAHE
GPVFSLLSTDCHLLSAGNGEVSAWSWSELIKKNVKPLWTKRPNYKSSLEIPEINSMVISP
RDNSLVVGGGDNNIHILDLEHGVFKSVLQGHSDYVHCVSVREREAEILSGGEDGAVRMWD
SRTGQSVHCIEVYKYESCARPQYGKWISCVTTDSDWMLCGGGPSLSLWHLRSLSPTSIFP
LSGCQRQAAFYQDMILAVGEGPFVSHCLMGGDVKAQIPCTPQSLNTLQLNTNSSEHRVLT
VGGSSDHIDVFTNLSYRTFSLSF
NT seq 972 nt   +upstreamnt  +downstreamnt
atgggtcccgtcgagctcctccacatgtccgtcttctctcagagtttctctccctgcggt
cgatttctggcagctggaaacaactatggagagattgctgtgttcagcctgtctgcagct
ctgagtccagacgccacggcgctcagtcagaaacctgttctgaccttcacagctcacgag
ggccccgtgttctcgctcctctccaccgactgtcacctcctcagcgcagggaacggagag
gtgagcgcctggagctggagcgagctcatcaagaagaacgtcaaacctctgtggacaaag
agaccaaactacaaatccagtctggagatcccagagatcaactccatggtcatcagcccc
agagacaacagtctggtcgttggaggaggagacaacaacatccacatcctggacctggag
cacggagtctttaagtctgtcctccagggacactcggactatgtccactgtgtgagcgtg
agagagcgggaggcagagatcctgtcggggggcgaggacggagcagtgaggatgtgggac
agcaggacgggtcagagtgtccactgcatcgaggtctacaagtacgagagctgcgcccgg
cctcagtacggtaaatggatcagctgtgtgacgactgactctgattggatgctgtgtggt
ggaggtccatctctgtctctgtggcacctccgctctctgtcgcccacctccatcttccct
ctgagcggctgtcagagacaggccgccttctaccaggacatgatcctggctgtaggtgaa
ggcccgtttgtgtctcactgtcttatgggtggagacgtcaaagctcagatcccgtgtacg
ccgcagagcctcaacacgctgcagctcaacaccaacagctccgagcacagggtgctgacg
gtgggagggagcagcgaccacatcgacgtgttcacgaacctgtcgtacagaacgttctca
ctcagcttctga

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