Epinephelus lanceolatus (giant grouper): 117268055
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Entry
117268055 CDS
T07331
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03013
Nucleocytoplasmic transport
ely03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117268055
03015 mRNA surveillance pathway
117268055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117268055
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117268055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
RRM_5
RBD_AKAP-17A
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117268055
NCBI-ProteinID:
XP_033500104
LinkDB
All DBs
Position
16:complement(24152801..24159765)
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AA seq
280 aa
AA seq
DB search
MAPSPTKRKEEEKTKDRGKEKTGTKEGDKDRGRDKARKRRSASTGSSSSRSRSSSTSSSS
SGSSSGSSSGSSSSGSSRSGSSSSRSSSSSSSSGSPSPSRRRHDNRRRSRSASKTQKRGD
DKERRKRSPSPKPTKVHLGRLTRNVTKDHIQEIFSTYGKIKMVEMPMDRVHPHLSRGYAY
VEFESPEEAQKALKHMDGGQIDGQEITASAVLTQRVRPPPRRPSPPRRMPPPQHMWRRSP
PRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcaccatcacccacgaagcggaaggaggaggagaaaacaaaagacagaggcaaagaa
aagactggcaccaaggaaggagacaaggacagaggacgggacaaagcaaggaaacgtcgc
agtgcctctactggcagtagcagcagcaggtccagatcgagctctacttcaagcagcagc
tccggctccagctcaggttcctcaagtggctccagctcatctggctccagccgctctggt
tcttcaagctctcgatcctcctcctcttccagctcctcaggctcccccagccccagccgt
agacgccacgacaaccgccgccgttcccgctcagcgtccaaaacacagaagagaggagat
gataaggagcgaaggaaaagaagccccagcccaaaaccaactaaagttcacttagggcgg
ctgaccaggaatgtcaccaaggaccacatccaggagatcttttccacttatggaaaaatc
aaaatggttgaaatgccaatggacagagtccacccacacctgtccaggggctacgcttac
gtggagtttgagagtcctgaggaggcccagaaggccctgaaacacatggacggaggtcag
attgatggacaagaaatcactgcatctgccgtgctaactcagcgagtgcgtcctccacct
cgcagaccttctcctcctcgcagaatgcctccaccacaacatatgtggcgtcgcagtcca
ccacgcatgaggagaaggtcccgctctccaaggaggcggtccccagtacgccgccgctct
cgctccagatctcctggtcgcaggcgccaccggtctcgttccagctccaactcctccaga
tag
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