Epinephelus lanceolatus (giant grouper): 117268066
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Entry
117268066 CDS
T07331
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04120
Ubiquitin mediated proteolysis
ely04137
Mitophagy - animal
ely04144
Endocytosis
ely04340
Hedgehog signaling pathway
ely04350
TGF-beta signaling pathway
ely04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117268066 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117268066 (smurf1)
04350 TGF-beta signaling pathway
117268066 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117268066 (smurf1)
04137 Mitophagy - animal
117268066 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
117268066 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117268066 (smurf1)
04121 Ubiquitin system [BR:
ely04121
]
117268066 (smurf1)
03029 Mitochondrial biogenesis [BR:
ely03029
]
117268066 (smurf1)
Enzymes [BR:
ely01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117268066 (smurf1)
Membrane trafficking [BR:
ely04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117268066 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
117268066 (smurf1)
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
HECT type E3
117268066 (smurf1)
Mitochondrial biogenesis [BR:
ely03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117268066 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
117268066
NCBI-ProteinID:
XP_033500117
LinkDB
All DBs
Position
16:complement(35500933..35526540)
Genome browser
AA seq
733 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVFEGCFSEEPLPYSDPTGA
AGGGNCRLDSPSQEGRLQTQRIRGQDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHTIISTQSQAKESSQAPQMDVGGEEGGNGGVGGGGGGGVDGDVAARYERDLVHKLKL
LRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVA
REWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHGH
YINGSFTLPFYKQLLGKPIQLNDLETTDPELHKSLVWILENDITSVLDHTFCVEHNAFGK
FLQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPFD
HKELELIIGGLGKIDLADWKTNTRLKHCTSESNVVRWFWQAVEAFSEERRGRLLQFVTGS
TRVPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKL
LTAVEETCGFAVE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcggaggaacgggtccagcatcaaaatccgactgacagtatta
tgtgccaagaacctcgcaaagaaagacttctttcgcctgccagatccatttgccaaggtt
gtggtggacggatcaggtcaatgccactcgacagacacagtcaagagcacactggacccc
aaatggaatcagcactacgacctctacattggaaagacagactccatcaccatcagtata
tggaaccacaagaagatccataaacgacagggggcgggcttcctgggctgcatacgactg
ctttccaatgccatcagcaggctaaaagacacaggataccagcgactggatctatgtaag
ctgaacccgtcggacagcgacgcagtgcgggggcagatagtagtgagcttacagacacga
gaccgcattggcagcggaggccccgtggtggactgcagaggactgttggaaaatgatgga
cctgtgtttgagggatgcttcagtgaagagccgcttccctactccgacccaactggtgcg
gcggggggcgggaactgtcgactcgactcgcccagtcaggagggccgcctacagacacag
cgaatcagagggcaggactcgagaggccacggccacacccctcagaacagacctcacggg
caccaaccgcctgacctgccagagggctatgagcaacgaacaacagtgcagggccaggtg
tacttccttcacacacagacgggagtcagcacttggcacgaccctcggataccgcgggac
ctggccagtgtgagctgtgaggagcttgggccgttgccagtgggctgggaggtccgaagc
accgtgtcgggccgaatctactttgtggaccacaacaacagaacgacacagttcacagac
ccgcgcctacacaccattatcagcacgcaatcccaagcgaaggaatcctcacaagccccc
cagatggatgtggggggtgaggaagggggtaatggaggagtgggcggaggaggaggagga
ggagtcgatggagacgtggcggcacgctatgagcgagacttggtccataagttgaagctg
ctccgacacgagctgtccttgcagcagcctcaagcaggacactgtcgcatcgaggtgtcc
cgagaggagatctttgaggagtcatatcggcagataatgaagatgaggcccaaagatcta
aagaagcgtctgatggtgaagttcaggggagaggagggcctggactacggtggggtggcc
agggagtggctgtacctgctgtgtcatgaaatgttgaacccctattacggcctgttccag
tactccacagacaatatctacacactacagatcaaccccgactcctccattaaccctgac
cacctgtcatatttccacttcgtgggtcgtgtgatgggcctggcagtttttcacggtcac
tacatcaacgggagcttcacgcttcctttctacaaacagctgctaggcaaaccaatccag
ctcaacgacctggagaccaccgacccggagttgcacaagagtctcgtctggatattagag
aacgacatcacctcagtcctcgaccacacgttctgcgtggagcacaacgcctttgggaag
ttcttacaacatgaactcaaacctaatggccgcaatattcccgtcactgaggagaacaag
aaggaatatgtaagactttatgtgaactggaggtttatgcgtggaattgaagcccagttt
ctggctctacagaagggattcagtgagctcatcccccagcacctcctcaaaccattcgac
cataaagaacttgagttgatcatcggtggactgggtaagatcgatctcgcggactggaag
acgaacacccgcctgaagcactgcacaagtgaaagcaacgtggtgcggtggttctggcag
gcggtggaggccttcagtgaagagaggagaggacgcctcctgcagtttgtcacgggctcc
accagggtcccattacaaggcttcaaggcgctgcagggttctacaggttctgcaggacca
aggctctttaccatccatttgatagacgccaacacagacaaccttcccaaggctcacaca
tgttttaaccggatagacatccctccctacgagtcttacgagaaactctatgagaaactg
ctgacggctgtggaggagacctgcggcttcgctgtggagtga
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