Epinephelus lanceolatus (giant grouper): 117268370
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Entry
117268370 CDS
T07331
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03030
DNA replication
ely03410
Base excision repair
ely03420
Nucleotide excision repair
ely03430
Mismatch repair
ely03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117268370 (pold1)
03410 Base excision repair
117268370 (pold1)
03420 Nucleotide excision repair
117268370 (pold1)
03430 Mismatch repair
117268370 (pold1)
03440 Homologous recombination
117268370 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ely03032
]
117268370 (pold1)
03400 DNA repair and recombination proteins [BR:
ely03400
]
117268370 (pold1)
Enzymes [BR:
ely01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117268370 (pold1)
DNA replication proteins [BR:
ely03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
117268370 (pold1)
DNA repair and recombination proteins [BR:
ely03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
117268370 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
117268370 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
divDNApol
Motif
Other DBs
NCBI-GeneID:
117268370
NCBI-ProteinID:
XP_033500629
LinkDB
All DBs
Position
16:complement(29778003..29790931)
Genome browser
AA seq
1105 aa
AA seq
DB search
MDFKRRNGGPFTGSASQAKRGKMAGEWEDSPSQFEEELSMFEDAEMEAEEMEGQAGHDVI
PVGDLFSADLNPRWRRPPAPTLNPSSETLVFQQIDLDYYLGTTVAGMPGQSQGKVPIIRM
FGVTDSGNSVCCHVHGFAPYFYVPAPSGFKSDYLGDFKRELNSVVLKDMRSNKDNISVTV
LAVDITRKESMYGYHGNRSLDFLRITMAMPRLIAPAKRLLEQGFKFGPFPIQGYQSYEAN
IDFEIRFMVDCDVVGCCWIELPKNKYRVREEKSAGDTDPRYPGKVSLCQYEVDVGWKDLI
SHPAEGDWQRIAPLRVLSFDIECAGRKGIFPEADKDPVIQIASMVQRQGETEPFIRTVFT
LQSCASIVGSQILCFTQEKQLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAAALKVN
FFPYLGRVRGIKSVLRDLNFQSKQMGRRENKTINMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEGGEDYTGATVIEPEKGYYSV
PIATLDFSSLYPSIMMAHNLCYTTLLQKGSAERENLSPEDFIKTPTGDMFVKSSKRKGLL
PEILENLLSARKRAKAELKKETDPFKRQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEQTKQLVESKYTISNGFQADAKVIYGDTDSVMVKLGVATVREAMDIGK
EAAEWVSSHFVQPIKLEFEKVYYPYLLINKKRYAGLYFSGSADTHDKMDCKGIETVRRDN
CPLVANLINTCLQKILIDRDPQGAVAHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG
KQAHVELAERMRKRDAGSAPHLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENNIPIDTQY
YLEQQLSKPLMRIFEPILGETKAENILLKGDHTRCKTVLTSKIGGLMAFAQKRSTCIGCK
AVLKTDAAVCDFCKKKESELYQKEIFHLNTLEERFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQSKLVNRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaaagacgcaatggtggccctttcacgggcagtgcgtcccaggccaaacgg
ggtaagatggctggtgaatgggaggacagtccatcgcagtttgaagaggagttgtccatg
tttgaggatgcggagatggaggcagaggagatggaggggcaggccggccatgatgttatt
cccgtaggtgacctcttctcagcagaccttaaccctcgttggcggcggcctcccgctcct
acactgaacccatcatctgaaactttggtgtttcagcagattgatctggactattattta
gggacgacggtggctggcatgcctggtcagtcgcaggggaaagtccccatcattcgaatg
tttggggtgacagacagtggcaacagtgtgtgttgccacgtccacggttttgcaccttac
ttctatgttcctgcaccaagtggttttaaatctgattacctgggtgactttaaaagagag
ttgaactctgttgtcctgaaggatatgcgatccaataaggacaacatctctgtcacagtg
ctggctgtggacatcacccgcaaagagagcatgtatggttaccatgggaatcgcagtttg
gattttttgaggataaccatggcgatgcctcgtctcattgcaccggcaaagagattgctg
gagcaggggttcaagtttggacccttccccatccagggttaccaatcatatgaggccaac
atagattttgagataaggtttatggtggactgtgatgtggtgggatgctgttggattgaa
cttcccaaaaacaagtacagagtacgtgaagagaagagtgcaggggacactgatcctcgg
tacccaggcaaggtgtccctgtgtcagtatgaggtggatgtgggatggaaagatttgata
agtcaccctgcagaaggagactggcagaggatcgcaccactcagggtcctcagctttgac
attgagtgtgcaggaaggaaaggaatcttcccagaagcagacaaagaccctgtgattcag
atagcgtccatggtgcagcgacagggtgagacagagcccttcattcgcactgtgttcact
ctccagtcctgcgccagcatcgtgggctctcaaatattgtgctttacacaggagaaacag
ctactgcagagctgggcggagtttttgaggacagtggatccagacatcatcactggatac
aacatccaaaactttgactttccttacttgctcaacagggcagctgctttaaaggtgaat
ttctttccctacctcggtcgagtgcgaggcatcaagtcagtcttgcgagacctaaacttc
cagagcaagcagatgggccgcagagagaacaagaccattaacatggagggccgggttcag
tttgatctactgcaggttctccttagggactataaactgcgctcatacacactaaacgct
gtgagtttccacttcctgcaagaacagaaggaggatgtgcagcactcaatcatcactgat
ctgcagaatggcaacgaacagacacgtcgtcgtttggccgtttactgcctgaaagacgcc
tacctcccactgcgcttgctgcagaagctgatgtgtgtgattaactacatggagatggcc
agagtgacaggtgtgcctctcacctacctgctgtcaagaggacagcagatcaaagttgtc
tctcagctgctgcgacaggccatgaaacaggacctggtcatgcctgttgtaaagacagaa
ggaggagaagattacactggagcgactgtcattgagccagagaaagggtattacagcgtt
cctattgccaccctggatttctcctctctgtatccgtccatcatgatggctcacaacctg
tgctacaccaccctgctgcagaagggctcagcagagagagagaacctctcaccagaggac
ttcatcaagactccgactggtgatatgtttgtgaagagctctaaaagaaaaggacttcta
cctgagatcctggagaacctgttgtctgctaggaagagggccaaagcagagctaaagaag
gaaactgacccttttaagaggcaggtgctggatggccgacagctggccctcaaaatcagc
gcaaactccgtctatggcttcacaggtgctcaggtgggcaagctgccttgccttgagatc
tcacagagtgtcactggttttggaagacagatgattgagcaaaccaaacagctggtggag
tccaagtacaccatttctaatggcttccaagctgatgccaaggtaatctatggagacaca
gactctgtcatggttaagcttggagttgccacagtgagggaggccatggatattgggaag
gaggcagcagagtgggtgtcgtcccatttcgtacagcccatcaaactggagtttgagaag
gtgtactatccatacctgctgatcaacaagaagcgctacgcaggcctgtatttctccggc
agtgcagacacacatgacaagatggactgtaaaggcattgagactgtccgcagagacaac
tgtcctctggtggctaaccttatcaacacctgtctgcagaaaatcctcatagacagggat
ccccagggtgctgtggctcacgctaaagaagtgatctctgacctactgtgcaaccgcatt
gacatcagccagcttgtcatcaccaaggagctaacgcgtacggctcaggagtacgctggc
aaacaggcgcacgtggagctggctgagaggatgaggaaaagagatgctggcagcgccccg
cacctgggagaccgagtgccatatgtcatcatcaaggctgcaaagggagtcgcagcatac
atgaagtcagaggacccgatctatgtgctggagaacaacattcccatcgacacacaatac
tacctggagcagcagctgtccaagcccctgatgagaatatttgagcccatcctgggagag
accaaagcagagaacatcctgctcaagggcgaccacacacgctgtaagactgtgttgacc
tcgaagatcgggggcctcatggcatttgctcagaagagaagcacctgtatcggctgcaaa
gctgtgctcaagacagatgcggctgtgtgcgatttctgtaagaagaaggagtctgaactg
taccaaaaagagatctttcacctgaacacactagaggagcgtttctctcgcctttggact
cagtgccagcgctgtcagggctccctccatgaggatgtgctctgtaccagccgagattgc
cccatcttttacatgaggaagaaggtgcagaaagatttggatgaccagagcaagctagtg
aatcgttttggatggtga
DBGET
integrated database retrieval system
