Epinephelus lanceolatus (giant grouper): 117268401
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Entry
117268401 CDS
T07331
Symbol
casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03013
Nucleocytoplasmic transport
ely03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117268401 (casc3)
03015 mRNA surveillance pathway
117268401 (casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117268401 (casc3)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117268401 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
117268401
NCBI-ProteinID:
XP_033500710
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All DBs
Position
16:12971977..12991925
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AA seq
778 aa
AA seq
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MADRRRRRRRASQDSEDDDESGSGSDSGRSGSPATSKGRVRDPEPPVVTAARPEAKSESE
CESEDGVGEAVLSDYDSADPEENGSHSEGVEEEEEVEQYSDEEAPAAASEPKPSADESST
KVEEVVEDEEDEEKEAEREGGGRSKEESKAEEKGNLAGERQSGDGQESTDDPETKAGGKP
GQKLDDDEDRKNPAYIPRKGLFFEHDVRGHAQEEERPKGRNRKLWKDEGRWEHDKFREEE
QAPKSREELIAIYGYDIRNGGGSGDRPYRQRRPRQNTSPSRDKRWRDGGGERPVRSWQSG
GGGLNRGGTPPSSNHPSSTSPSSVPLSSAQRGSNPSRPPPSRSRPSHQNQMHLPPQSQYR
NNESNTPQMHPRERQGPKAQSDPTGDRGGVSRGGRGGGGGGGGGGGRGPSVVIEDIAVSQ
GGVREQDLSVVTTAASSQPDGYQSTSPRRQQQEQRGSADRSAAGSVAPSSTSDPSLQSSA
TNREASPPTERPVERKSYSLARRTRSRPADLGSKQPSMEESAAGGNTSSPGSVAGKSWAG
ASDGPSQAGGGGGGLTELDQDVARLSLVGQSWSQSPSSYMRSEMRGLPSTMHIPSGPPQF
SGMEEMGVGSNRAKRYSSQRQRAVPEPAPPMHLGVMEGHYYEPMSYQGPIYGDGPAPIPP
QGMLVQPEMHIPHPGLHPHQSGGPIANPALYGGPTVSLSPGQPQQLLPPPFYPPPGVMTF
PYPTMYPSPQGQAQVTYGGVTYYDTMQQQAQPKPSPPRRTSQPVTVKPPPPELHFASE
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcgaaggaggaggcgcgcgtcccaggacagcgaggacgacgacgag
tccggttcgggttcggacagcgggaggtcggggtccccggcgaccagtaagggccgagtg
agggatcccgaaccgccggtggtgacagcggcccgacccgaggcgaagagcgagtccgag
tgtgagagtgaagatggtgtaggagaagctgtcctctctgactacgacagtgccgatcca
gaagaaaatggctcccattcagagggagttgaggaggaagaggaggttgaacagtacagt
gatgaagaagctccagcagcagccagcgagcccaaaccctcggcagacgaaagctcaaca
aaggtagaagaggtggtggaggatgaggaggatgaagagaaggaggcagagagggaggga
ggtggaaggagtaaagaggagagcaaggcagaggagaaaggaaaccttgctggagagaga
cagagcggtgatggacaggagtctacagacgaccctgagacaaaggcgggaggaaaacca
ggtcagaagctcgacgatgacgaggacagaaagaacccggcctacatcccaaggaagggt
ctgttcttcgagcacgatgtcagagggcatgctcaggaagaggagagacctaaaggtaga
aacaggaagttgtggaaggacgagggtcgctgggagcatgacaagttcagggaggaggag
caggcgccgaagagccgcgaagagcttattgcaatctacggctatgacatcagaaatggt
ggtggctccggagaccgaccataccggcagcgcaggccgagacaaaatacatctcccagc
agagacaagcggtggagagatggaggaggagagcgaccggtccgatcatggcagagtgga
ggaggaggtctaaaccgaggaggaactccaccttcatcaaaccacccctcctctacatcc
ccctcctctgttcctctttcctctgctcagcgcggcagcaatccctccagaccacctccc
tctcgcagcagaccatcccaccagaatcaaatgcaccttccgcctcagtcacagtacagg
aataatgaatcaaacacaccccagatgcaccctagggaacgacagggccctaaagctcag
tctgaccctacaggagacaggggtggggtcagcaggggaggacgtggtggtggtggtggt
ggtggtggtggtgggggaagggggccttctgtggtcattgaggatattgcagtcagccaa
ggaggcgttagggaacaggacctaagtgttgtaacgacagcggcatcatcgcagccagac
ggttaccagtctacatcaccaagacgacagcagcaagaacagcgagggagcgctgataga
tctgcggcaggatcagttgctccctcctccacctctgacccctcccttcaatcatcagcg
accaatcgggaagcctctcctcccaccgagcggccggtggagcgtaaatcttactctctg
gcacgcaggactcgctctcggcccgctgacctgggcagcaaacagccatctatggaagag
tctgcagctggagggaacacctcctccccaggcagcgtggcggggaagagctgggcagga
gcaagcgatgggccgagtcaggcgggtggaggaggtggagggctgacagagctggaccag
gatgtggctcgactcagtctggttggacagagctggagccagagcccatcatcctacatg
cggtctgagatgagaggcctccctagtaccatgcacatccccagtggcccaccccagttc
tccggcatggaggagatgggtgtcggctccaatcgagccaaacgctactcatcccaacgt
cagagagccgtacctgagccagcaccaccgatgcacctgggagtgatggagggacactac
tatgaacccatgtcgtaccagggaccaatctacggggacggccccgcccccatcccgcca
cagggcatgctggtccagcctgagatgcacatcccccatcctggtctccatccccatcag
tcaggcggcccgatcgctaaccccgccctctacggtggcccaactgtttctctgtctccg
gggcaaccacagcagctgctgccaccgcctttctaccctccaccgggggtcatgaccttt
ccttaccccaccatgtacccaagtccacagggccaggcccaggtgacctacggaggtgtg
acatactacgacacgatgcagcagcaagctcagcccaagccttcacctccccgccgcaca
tcccagcccgtcactgtcaagcccccccctccggagctgcactttgcctcagagtga
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