KEGG   Epinephelus lanceolatus (giant grouper): 117268401
Entry
117268401         CDS       T07331                                 
Symbol
casc3
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
ely  Epinephelus lanceolatus (giant grouper)
Pathway
ely03013  Nucleocytoplasmic transport
ely03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ely00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117268401 (casc3)
   03015 mRNA surveillance pathway
    117268401 (casc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ely03019]
    117268401 (casc3)
Messenger RNA biogenesis [BR:ely03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     117268401 (casc3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 117268401
NCBI-ProteinID: XP_033500710
LinkDB
Position
16:12971977..12991925
AA seq 778 aa
MADRRRRRRRASQDSEDDDESGSGSDSGRSGSPATSKGRVRDPEPPVVTAARPEAKSESE
CESEDGVGEAVLSDYDSADPEENGSHSEGVEEEEEVEQYSDEEAPAAASEPKPSADESST
KVEEVVEDEEDEEKEAEREGGGRSKEESKAEEKGNLAGERQSGDGQESTDDPETKAGGKP
GQKLDDDEDRKNPAYIPRKGLFFEHDVRGHAQEEERPKGRNRKLWKDEGRWEHDKFREEE
QAPKSREELIAIYGYDIRNGGGSGDRPYRQRRPRQNTSPSRDKRWRDGGGERPVRSWQSG
GGGLNRGGTPPSSNHPSSTSPSSVPLSSAQRGSNPSRPPPSRSRPSHQNQMHLPPQSQYR
NNESNTPQMHPRERQGPKAQSDPTGDRGGVSRGGRGGGGGGGGGGGRGPSVVIEDIAVSQ
GGVREQDLSVVTTAASSQPDGYQSTSPRRQQQEQRGSADRSAAGSVAPSSTSDPSLQSSA
TNREASPPTERPVERKSYSLARRTRSRPADLGSKQPSMEESAAGGNTSSPGSVAGKSWAG
ASDGPSQAGGGGGGLTELDQDVARLSLVGQSWSQSPSSYMRSEMRGLPSTMHIPSGPPQF
SGMEEMGVGSNRAKRYSSQRQRAVPEPAPPMHLGVMEGHYYEPMSYQGPIYGDGPAPIPP
QGMLVQPEMHIPHPGLHPHQSGGPIANPALYGGPTVSLSPGQPQQLLPPPFYPPPGVMTF
PYPTMYPSPQGQAQVTYGGVTYYDTMQQQAQPKPSPPRRTSQPVTVKPPPPELHFASE
NT seq 2337 nt   +upstreamnt  +downstreamnt
atggcggaccggcggcgaaggaggaggcgcgcgtcccaggacagcgaggacgacgacgag
tccggttcgggttcggacagcgggaggtcggggtccccggcgaccagtaagggccgagtg
agggatcccgaaccgccggtggtgacagcggcccgacccgaggcgaagagcgagtccgag
tgtgagagtgaagatggtgtaggagaagctgtcctctctgactacgacagtgccgatcca
gaagaaaatggctcccattcagagggagttgaggaggaagaggaggttgaacagtacagt
gatgaagaagctccagcagcagccagcgagcccaaaccctcggcagacgaaagctcaaca
aaggtagaagaggtggtggaggatgaggaggatgaagagaaggaggcagagagggaggga
ggtggaaggagtaaagaggagagcaaggcagaggagaaaggaaaccttgctggagagaga
cagagcggtgatggacaggagtctacagacgaccctgagacaaaggcgggaggaaaacca
ggtcagaagctcgacgatgacgaggacagaaagaacccggcctacatcccaaggaagggt
ctgttcttcgagcacgatgtcagagggcatgctcaggaagaggagagacctaaaggtaga
aacaggaagttgtggaaggacgagggtcgctgggagcatgacaagttcagggaggaggag
caggcgccgaagagccgcgaagagcttattgcaatctacggctatgacatcagaaatggt
ggtggctccggagaccgaccataccggcagcgcaggccgagacaaaatacatctcccagc
agagacaagcggtggagagatggaggaggagagcgaccggtccgatcatggcagagtgga
ggaggaggtctaaaccgaggaggaactccaccttcatcaaaccacccctcctctacatcc
ccctcctctgttcctctttcctctgctcagcgcggcagcaatccctccagaccacctccc
tctcgcagcagaccatcccaccagaatcaaatgcaccttccgcctcagtcacagtacagg
aataatgaatcaaacacaccccagatgcaccctagggaacgacagggccctaaagctcag
tctgaccctacaggagacaggggtggggtcagcaggggaggacgtggtggtggtggtggt
ggtggtggtggtgggggaagggggccttctgtggtcattgaggatattgcagtcagccaa
ggaggcgttagggaacaggacctaagtgttgtaacgacagcggcatcatcgcagccagac
ggttaccagtctacatcaccaagacgacagcagcaagaacagcgagggagcgctgataga
tctgcggcaggatcagttgctccctcctccacctctgacccctcccttcaatcatcagcg
accaatcgggaagcctctcctcccaccgagcggccggtggagcgtaaatcttactctctg
gcacgcaggactcgctctcggcccgctgacctgggcagcaaacagccatctatggaagag
tctgcagctggagggaacacctcctccccaggcagcgtggcggggaagagctgggcagga
gcaagcgatgggccgagtcaggcgggtggaggaggtggagggctgacagagctggaccag
gatgtggctcgactcagtctggttggacagagctggagccagagcccatcatcctacatg
cggtctgagatgagaggcctccctagtaccatgcacatccccagtggcccaccccagttc
tccggcatggaggagatgggtgtcggctccaatcgagccaaacgctactcatcccaacgt
cagagagccgtacctgagccagcaccaccgatgcacctgggagtgatggagggacactac
tatgaacccatgtcgtaccagggaccaatctacggggacggccccgcccccatcccgcca
cagggcatgctggtccagcctgagatgcacatcccccatcctggtctccatccccatcag
tcaggcggcccgatcgctaaccccgccctctacggtggcccaactgtttctctgtctccg
gggcaaccacagcagctgctgccaccgcctttctaccctccaccgggggtcatgaccttt
ccttaccccaccatgtacccaagtccacagggccaggcccaggtgacctacggaggtgtg
acatactacgacacgatgcagcagcaagctcagcccaagccttcacctccccgccgcaca
tcccagcccgtcactgtcaagcccccccctccggagctgcactttgcctcagagtga

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