Epinephelus lanceolatus (giant grouper): 117268417
Help
Entry
117268417 CDS
T07331
Symbol
taf1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117268417 (taf1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ely01001
]
117268417 (taf1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ely03021
]
117268417 (taf1)
03036 Chromosome and associated proteins [BR:
ely03036
]
117268417 (taf1)
Enzymes [BR:
ely01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
117268417 (taf1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117268417 (taf1)
Protein kinases [BR:
ely01001
]
Serine/threonine kinases: Other
TAF1 family
117268417 (taf1)
Transcription machinery [BR:
ely03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117268417 (taf1)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
117268417 (taf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
117268417
NCBI-ProteinID:
XP_033500752
LinkDB
All DBs
Position
2:3064408..3085075
Genome browser
AA seq
1985 aa
AA seq
DB search
MSDSDSDEDQDRPFSITGFLFGNINEDGQLEDDSVLDNESKKHLAGLGNLGLGSLITEIT
ANDEDDQEDSRDSGSVDAEGWVKSTEDAVDYSDISEVAEDETKKYRQAMGSLQPSRKTDD
EDDYDADCEDIDSKLMPPPPPPSLPTAAKKEEPSSQSTNAGEEGDGIILPSIIAPSSTAD
KVDFSSSSDSESETDRPCQGLGSGGPPDRLTLPLAGIMQKDAAKALPGVTELFPEFRPGR
VLRFLRLFGPGKNMPSVWRSARRKKKRKHRDPQPGTPPPEGEPTEQSLEKKSGWLYEYAA
PPPPEQCLSDDEITMMAPVESKFSQTCGDGDKEAESRPKVAEWRYGPAQLWYDMLGVSED
GSNFTYGFKLKDEHTSEPQQQDTPKEITETAHEFQRLDGDDNDDNEDGDKDRSALENEVF
LMVTQLKWEDDIIWNGEDVKHKGTKTQRASLAGWLPSSMTRNANAYNAQQGLTRSNSQLV
PPTPPPMPKASSISGSKREKNSHDNQASHEEDSPWFSIFPIDNEELVYGRWEDNIIWDDQ
EMDHLLMPPVLTLDPNDENIILEIPNEKEEMTSHSPSKENKKETAIKKSRILLGKTGVIK
DEPQQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPALELRQPFFPTHMGP
MKLRQFHRPTLKKYSFGALAQPGPHPAQPLLKHIKKKAKMREQERQASGGGDMFFMRTPQ
DLTGKDGDLILAEYSEEYPPLIMQVGLATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSP
FLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLVLRTRHGLYIREIVDIFVVGQQCPLF
EVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLC
ADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLVAEQRLKDAGYGEKSFF
APEEENEEDFQMKIDDEVRTAPWNTTRAFISAMKGKCLLEVTGVADPTGCGEGFSYVKVP
NKPTQQKDDKEPQPAKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVV
RTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEVLSTDTDS
SSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLMGEESDRDHKGRKERR
KGLSSSLSTSSHKDDDTSSVTSLNSSATGRRLKIYRTFKDEDGKEYVRCETVRKASVIDA
YTRIRTTKDDEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKDKIKGPPEKKAKK
VKERPDLKVKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHND
NEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGNAVHCDYLNKPH
KAIHRRRTDPMVTLSSVLESIINDMRDHPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLR
ENVRKRMYPSREEFREAVEVIVKNSATYNGAKHPITQVAQSMLDLCDTKLKEKEDRLVRL
EKAINPLLDDDDQVAFSFILDNIVTQKMMVVPDSWPFHHPVNKKFVPDYYKVIVNPMDLE
SIRKNISKHKYQNRDAFLSDVSLIHANSIKYNGPDSPYTKTALDIVNVCKQTLAEYDEHL
TQLEKDISTAKEAALDAADLECLDPMTPGPYTPQPADLFDSGASGSLPRETSSLFSEGPL
VVAPEKRGGQGRHSRRPGEEESDVDIEGFEEEDDGKPKTPAPAEDADGDLEDEDDEEDML
LPPRRRLHDQEDEEEEDDDGLSNRPAQASVLYQDLLMSDGEDDESEEEGDNPFSSIQLSE
SGSDSDREVDVRPAPPRRAQDTARMGMEQDESMMSYEGDGPDEPHMEDSNVSYGSYEETE
SRSQMQASSMRNGEDYGISEEEEEDEEDEARRRGPAVLSQVQLSEDEESEEFRSIGGDSD
MDSDN
NT seq
5958 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcagacagtgacgaggaccaagaccgtcctttctctatcactggcttcctc
tttggaaacatcaatgaagatggacagctggaggatgacagtgttctggacaatgagtcc
aaaaagcatttggctggtttgggaaatctaggtcttggctcactcattacagagatcact
gccaatgatgaggatgatcaagaggacagcagggactctggtagcgtggacgcagaaggt
tgggtgaaaagcacagaagatgcagttgattattcggacatcagtgaagttgctgaggat
gagacaaagaagtaccgtcaggccatggggtctttgcagcccagcaggaaaacagatgat
gaggatgactatgatgctgactgcgaggatattgattctaaacttatgcctcctccgcca
ccaccgagtctacccactgctgctaagaaagaggaaccctcctctcagagcacaaatgct
ggggaagagggtgatggcatcatcctgccctccatcattgcgccatcatctacggctgat
aaggttgacttcagcagctcctcagactcagagtcagaaactgaccgtccttgccagggc
ttggggtctggaggccccccagataggctcaccctccctcttgctggcatcatgcagaaa
gatgctgccaaagccctgccaggtgtcacagagcttttccccgagttcaggcctggaagg
gtgctcaggttcttacggctgtttggtccgggaaagaacatgccatcagtttggaggagt
gcccgcaggaagaagaagcggaagcacagagaccctcagcctgggacacctcctccggaa
ggagagcccacagagcagagcctggagaagaaatctggatggctttacgagtacgcagct
cctccacccccagagcagtgtttgtctgatgatgagataaccatgatggctccagtagaa
tctaagttctcacaaacttgcggcgatggggacaaggaggcagagtctcgaccgaaagta
gcagaatggagatatggtccagcacagctctggtacgacatgctaggagtctctgaggat
ggaagcaacttcacctatggcttcaagctaaaagacgagcacaccagtgagcctcagcag
caggacacgcctaaagaaataacagagactgcacatgagtttcagaggctggacggcgac
gacaatgatgataatgaggatggagataaggacagatctgccctcgagaatgaagtcttc
ctgatggtcactcaactgaaatgggaggatgatattatctggaatggagaggacgtaaaa
cacaagggcacaaagactcagcgagccagtttggcaggatggctgccatctagcatgacc
cgcaatgcaaatgcttataacgcacagcagggtctgacgagaagcaattcccagttggtg
ccacctacacctccgcctatgcccaaagcttcttcaatctctggctctaagcgggaaaaa
aacagccatgataatcaagcctctcacgaagaagactctccctggttctcgattttcccc
attgacaacgaggagttggtgtatggacgctgggaagataacattatctgggatgaccag
gagatggatcacttgctcatgccacctgttcttacactggatcccaatgatgaaaatatc
atcctagaaattcccaatgaaaaggaggagatgacttcccactccccatcaaaagagaac
aagaaggaaacggcaatcaagaagagccgcatcctgctggggaagaccggcgtgataaaa
gatgagccacagcagaacatgtcccagcccgaagtgaaggacccctggaacctctccaat
gatgagttctattatcctaaacagcaggggctgaggggaacgttcggtggcaacattatt
cagcactctatccctgcactggagctgaggcagcctttcttccccactcacatggggccc
atgaagctgcgccagtttcatcgaccgactctgaagaagtactcatttggagctttggct
caaccaggtccccatcctgcccagcctctgctcaaacacatcaagaagaaggccaagatg
cgagagcaggagcgtcaggcgtcaggtggaggagacatgttcttcatgcgaactccgcag
gacttgacaggcaaagatggagatctgatcctggcagagtacagcgaagaatacccccct
ctcatcatgcaagttggcttggccaccaagatcaaaaactactacaaaaggaaacctgga
aaagatcctggagcacccgactgtaaatatggagagaccgtgtactgccacacgtccccg
ttcctgggttctcttcatcctggacagctgctccaggcatttgaaaacaaccttttccgt
gctccaatctacctgcacaagatgccagagactgatttcttggtcctgcgaacgcgacat
ggcctctacattagagagattgtggacatttttgtagttggtcagcagtgccccttgttt
gaggttccagggcccaactccaaacgagccaatactcacatcagagacttcctacaggtg
ttcatttaccgcttgttctggaagagcaaggaccggccccgcagaatccgcatggaagat
attaagaaagcttttccctcacactcagagagcagcatcaggaaacggctaaaactgtgt
gctgacttcaaacgtacagggatggattctaactggtgggtgctgaagcctgacttcaga
ctgcctacagaggaggagatcagggccatggtgtctccagagcagtgctgtgcttactat
agcatgctggtggcagagcagaggctcaaggatgctgggtatggtgagaaatccttcttt
gctccagaggaggagaatgaagaggactttcaaatgaagattgatgatgaggtgcggaca
gctccttggaacacaacaagagccttcatttctgccatgaaggggaaatgcctgttggaa
gttacaggtgtggctgatcccactggctgcggagagggtttctcttacgtcaaagtgccc
aacaagcccactcaacagaaggatgacaaagagccgcagcctgctaagaagactgtgacg
gggacagacgctgacctgaggagactctcactaaagaatgccaagcaactgctgcgcaag
tttggtgttccggaggaagagatcaagaagctctcacgttgggaggtgattgacgtggtg
agaaccatgtccacagaacaggcacgctcaggcgagggacccatgagcaagtttgccaga
ggctctcgtttctctgttgccgagcaccaggagcgctacaaggaggagtgccagaggatc
tttgacctgcagaacaaagtgttagagtcgacagaggtgctctccacagacacagacagc
agctcagcagaggacagtgactttgaggagatggggaagaacattgagaacatgctccag
aacaagaagaccagctcccagctttcccgcgagagggaggagcaggagaggaaggagctg
cagaggatgctgatgggcgaggagagcgatcgcgaccacaagggacgcaaggagaggcgc
aaaggcttgtccagctccctatccaccagctcccataaagacgacgacacgtcctccgtc
accagcctaaactcctcagccacaggacggcgactcaaaatctatcgcaccttcaaggat
gaggacggcaaggagtatgtccgctgcgagacggtgcgcaaggcttccgtcattgacgcc
tacaccaggatcagaaccaccaaggatgatgaattcatacgaaagtttgccctcttcgat
gagcagcacagagaggagatgaggaaggagcgccggcgtattcaagagcagctgaggagg
ctgaagagaaaccaagagaaagacaagatcaagggacctccagagaagaaggccaagaag
gtcaaagagagaccagacctcaaggtaaaattaaagtgcggcgcatgtggagccatcgga
cacatgaggaccaacaagttctgcccactgtactatcagaccaacgccccgccttctaac
ccagttgccatgacagaggagcaagaggaggagctggaaaagactgtcatccacaatgac
aacgaggaactgataaaggtggagggcaccaagattgtgctgggcaaacagcttattgag
agtgctgatgaggtccgcagaaagtctttagtgctcaagttccccaagcagcagctcccg
ccgaagaagaagagacgtgtaggcaacgctgtgcactgtgactacctcaataaaccccac
aaggccattcaccgcagacgtactgaccccatggtgaccttgtcttctgtgctagagagc
atcatcaatgacatgcgggatcaccccaatacatatccattccacacaccagtcaatgcc
aaggttgtgaaggactactataagatcatcacacggcctatggatctgcagacgctgagg
gagaatgttcgtaaacgaatgtacccatcaagagaggagttccgtgaagcagtggaagtc
atcgtcaaaaacagcgcaacttacaatggggcaaaacatccaataacacaggtagcacag
tccatgctggacctgtgcgatactaaacttaaagagaaggaggacaggctggtgaggctg
gagaaagccatcaaccccttgctggatgatgatgatcaggtggccttctccttcatcctg
gacaacattgtaacccagaagatgatggtggttcctgactcatggccgtttcaccatcct
gtcaacaaaaagtttgtgcctgattattataaagtgatcgtaaacccaatggatctggag
agcatccgcaagaacatctccaaacacaaataccagaaccgagatgcgttcctttcagac
gtcagtctcatccatgccaacagtatcaagtacaatggcccagacagtccttacaccaag
acagccctggacattgtcaatgtgtgcaagcaaaccttggcagagtatgatgagcacttg
acccagttggagaaggacatctctactgccaaagaggcggctctagatgcagcagacttg
gagtgtttggacccaatgacaccaggaccatacacgccgcagcctgctgatctgtttgac
agcggggcttcagggagtctacccagagagaccagcagccttttctctgaaggacctcta
gtggttgctccagagaagagaggggggcagggtcgccacagcagaagacccggggaggaa
gagtcagatgtggacattgaaggctttgaggaggaagatgatggcaaacctaagactcct
gctcctgcagaggatgcagatggagatctcgaagacgaagatgatgaagaggacatgctg
ctgccgcctcgcagacggctgcatgaccaggaggatgaggaggaggaggacgatgacgga
ctttcaaaccgcccagcccaagccagtgtgctgtaccaggacctgctcatgtctgacgga
gaagatgatgagagcgaagaggagggcgacaaccctttctcatccatacagctgtcagag
agtggtagcgactctgacagagaagtggatgtgcgtcccgcccctccacggagagctcaa
gacacagctcgcatgggcatggagcaagacgagagcatgatgtcatatgaaggggacggg
cctgatgagccacacatggaagacagcaatgtcagctatggcagctacgaggagacagag
agcaggagtcagatgcaggcctccagcatgagaaacggagaagactatggcatcagcgaa
gaggaggaggaagatgaagaagatgaagcacggagaagaggcccagctgtgctctcccag
gtccagctcagtgaagacgaggagagcgaagaattcagatctataggaggagacagcgac
atggactctgacaactag
DBGET
integrated database retrieval system
