Epinephelus lanceolatus (giant grouper): 117268438
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Entry
117268438 CDS
T07331
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely00310
Lysine degradation
ely00514
Other types of O-glycan biosynthesis
ely01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117268438 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117268438 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ely01003
]
117268438 (colgalt1a)
Enzymes [BR:
ely01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
117268438 (colgalt1a)
Glycosyltransferases [BR:
ely01003
]
O-Glycan biosynthesis
O-linked Gal type
117268438 (colgalt1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_tranf_2_4
Glyco_transf_25
Anp1
DUF6492
Motif
Other DBs
NCBI-GeneID:
117268438
NCBI-ProteinID:
XP_033500788
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All DBs
Position
18:21308260..21319448
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AA seq
610 aa
AA seq
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MPGLACLPAALLLLLLSGCSPARGYFAEERWSPESPLLAPRVLVALICRNSEHSLPYFLG
AFERLNYPKERMALWVATDHNQDNTTVILRDWLVKMQNLYHYVEWRPKEEPKRYADEDGP
KHWTDLRYEHVMKLRQVALESAREMWADYFMLVDCDNLLTNPDVLWKLMKENKTIIAPML
ESRAAYSNFWCGMTSQGYYKRTPAYLPMRKQLRKGCFAVPMVHSTFLIDLRKEASRQLAF
HPPHPEYSWAFDDIIVFAFSARMADVQMFVCNKETYGYFPVPLRSHNTLQDEAESFLHSL
LEVNVRNPPLMPSKHIRVPRKQPDKLGFDEVFMINLQRRTDRRDRMLRTLYEQEITCKVI
AAVDGKAMNISEIHTMGIHMLPGYSDPYHGRPLTKGELGCFLSHFNTWKEIVERRLETSL
VIEDDLRFEVFFKRRLMNLMREVQEEGLDWDLIYIGRKRMQVDHPEKAVPNIHNLVEADY
SYWTLGYMISLQGAEKLLKAKPLQRILPVDEFLPIMYNKHPVTDYMDQFETRDLKAFSAE
PLLVYPTHYTGDDGYISDTETSTVWDNEKVRTDWDRARSGKTGEQAEISTKAQNSDVLQS
PLDSTARDEL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggctcgcgtgcctccccgccgccctgctcctcctgctgctgtccggctgctct
cctgctcggggatacttcgcggaggagcgctggagccccgagtctccgctcctggctccc
cgggttctcgtcgccctcatctgcagaaactccgagcactctctgccgtatttcctcggt
gcttttgagcgtctcaactaccccaaggagcgtatggctttgtgggtggcgactgatcat
aaccaggacaacaccacagtcattctgcgtgactggcttgtcaagatgcagaatctttac
cattatgtggagtggaggcctaaagaggaacccaaacgttatgcggatgaagacggtccg
aagcattggacagacctccgttatgagcatgttatgaagcttcgacaagtggcactggag
tcagctcgtgagatgtgggcggactactttatgttggtggactgtgataacctcctcacc
aatcctgatgtactgtggaagctcatgaaggagaataagaccatcattgctccaatgctt
gaatcccgtgcagcctattcaaacttctggtgtggaatgacctcgcagggttactacaaa
cgcactcctgcctacctacccatgagaaagcagttgcgcaagggctgttttgcagttccc
atggtccactccactttcctgatcgacctcaggaaagaggcatccaggcagctggccttt
cacccgccacacccagagtacagctgggcttttgatgacatcattgtgtttgcgttctct
gctcggatggcagatgttcaaatgtttgtatgcaataaagagacctacggttacttccct
gtgcctctgcgatcccacaatactttgcaagacgaagctgagagcttcttgcactccctc
ctggaggttaatgtgcgaaatcccccactgatgccttccaaacacatacgtgttcctaga
aagcaacctgacaaactgggctttgatgaggtgttcatgataaacctgcagaggcgaacc
gaccgccgagaccgtatgctgaggacattatacgagcaggagattacttgtaaggtcatt
gcagctgtagatggaaaagcgatgaatatcagtgaaattcatactatgggcatccacatg
ctccctggatacagtgacccctatcatggtcgcccgctgacgaagggagagctgggatgc
ttcctttcccactttaacacctggaaagagattgtggagagacgcctggaaacctccctg
gtgattgaggacgacctgcgcttcgaggtgtttttcaaacgacgcttgatgaacttgatg
agggaggtacaggaggaaggactggactgggatctcatatatattggtcggaagagaatg
caagtggatcacccggagaaagcagtgcctaatatacacaacttagtggaagcagactat
tcatattggacactgggctatatgatatcgcttcaaggtgcagagaagcttttgaaagcc
aaaccacttcagaggattttgccggtggatgagtttcttcctatcatgtataataaacac
cctgtgactgattatatggaccagtttgaaaccagggacctgaaggcattttcagctgag
cctcttctagtgtatccgacacactacacgggcgatgacggctacatcagcgacaccgag
acttccacagtgtgggacaacgaaaaggtccgtacagactgggacagagcacgctcaggg
aaaactggggagcaggctgagatcagcaccaaggcccagaactcagatgtgctccagtcg
cctttggacagtacagcacgggacgagctatga
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