Epinephelus lanceolatus (giant grouper): 117268632
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Entry
117268632 CDS
T07331
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04514
Cell adhesion molecule (CAM) interaction
ely04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117268632 (lrrc4ba)
04517 IgSF CAM signaling
117268632 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117268632 (lrrc4ba)
Cell adhesion molecules [BR:
ely04515
]
Immunoglobulin superfamily
NGL family
117268632 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
117268632
NCBI-ProteinID:
XP_033501135
LinkDB
All DBs
Position
18:complement(13296024..13332699)
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AA seq
734 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLAQLLLRLLLPGPELVGAASSCPSLCTCSNQASRVICTRQNL
EEVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWICNC
DVLWLSWWLKETVPSNTTCCARCHAPPFLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETPGEEESALVAINETFIRVHPGP
TPSGHLWPEGVSTTASSLSAGWSPSSPRATRPTFTVPFTEPGFSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTVT
QSGSSGIGGGKSLRLHHPEIVNLPNLARSEHLNHYYKTHHFNNNMMGLGMGTGTGVGLNN
NNNPSPCSQSQNTSISCSQVPTSGGTPTGGTLPSPVPLPQMGLHSSLKGLMGKSQNEPLL
FKSGSKENVQETQI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccttcccccttcctctttctattggcc
cagctgctattgcggctccttctccctgggccggagttggtgggagccgcctcctcctgc
ccctccctctgcacctgctccaaccaggccagccgagtcatctgcaccaggcaaaacctg
gaggaggtgcccgaaagcatatcagtcaacacacgatacctcaacctgcaggagaactcg
atacaggtcatcaagtcagacactttcaagcacttgaggcaccttgagatcctccagctc
tccaagaatcagatccgtcagatcgaagtcggagcattcaatggcctccccaacctcaac
acactggagctcttcgacaaccgcctcacactggtgccatcacatgcctttgagtacctc
agcaagctgcgggagctgtggctgcgcaacaaccccattgagactctgccgggctatgcc
ttccaccgtgtgccctcgctacgtcgcctggacctgggtgagctcaagaagttggatttc
atctctgacgcagcctttgtgggcctcatcaatctacgctacctgaacctgggcatgtgc
gggctgaaggacattcccaaactgacagcccttgttcgtttggaggagctggagctgtca
ggaaaccgactggagatcatccgacctggctccttccagggcctggtgtccctccgcaag
ctgtggctaatgcactcacaggtgtccgtcatcgagcgcaacgccttcgatgacttgaaa
aacctggaagagctcaacctatcccataactccctgcactcattgccccatgacctcttc
acaccccttcaccagctggagagggtacaccttaaccacaacccctggatctgcaactgt
gatgtgctttggcttagttggtggctaaaagagacggtgcccagcaacaccacctgctgt
gctcgctgccatgctcccccattcctgaagggcaagtacattggagagcttgaccagagc
cacttcacctgctatgcgccggtcatcgtggagccacctacagacctcaatgtcactgag
ggtatggccgctgagctcaagtgtcgcacaagcacctccacaacatctgtcaactggatc
acccctaatggcacactaatgacccatggctcttacagagtgcggatatccgtcctgcat
gatggcacactcaacttcacgaatgtcaccctgcgtgacacgggccagtacacctgtatg
gtcaccaatgctgctggcaataccacggcgactgctgtcctcaatgtcaccgctgctgat
gccagtgtcaactacacctattttacaacagtcacagtggaaacagtggagaccccagga
gaagaagagtctgcgttggtagccattaatgagacatttattcgtgttcaccctggcccc
acgccctcgggacacctgtggccagagggtgtttctaccacagcctcctctctgtcagca
ggctggtccccctcctctcctcgggccacccgacccaccttcactgtgccattcactgaa
ccaggcttctcgggcctggatgatgtgatgaagaccaccaagatcatcattggctgcttc
gtagccattaccttcatggcagcagtgatgctggtggtgttctataagttgaggaagcag
catcagctgcacaaacaccatggccctgctcgtgccattgagatcatcaatgtggaggat
gagctgggggctggggccagtgggcggggcagtggcatctcaggaggctccaccgtgacg
cagagcggaagcagtggaataggaggaggcaagagcctcaggctgcaccacccagagata
gtcaacctgccaaacctggctcgatcagagcacctcaaccattactacaaaacccatcac
ttcaacaacaacatgatgggcctgggaatgggcactggcactggtgtgggcctcaacaac
aacaacaacccctcgccttgctctcagtctcagaacacatccatatcctgttcccaggtt
ccaaccagtggaggaacacccacaggtggcacccttccctcccctgtgcccctgccccag
atgggtctccacagttctctgaaaggccttatggggaaaagccagaatgagcccctgctt
tttaagagcggctccaaggaaaatgtgcaagagactcaaatttga
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