Epinephelus lanceolatus (giant grouper): 117268652
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Entry
117268652 CDS
T07331
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04120
Ubiquitin mediated proteolysis
ely04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117268652 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117268652 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117268652 (mgrn1b)
Enzymes [BR:
ely01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117268652 (mgrn1b)
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117268652 (mgrn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
117268652
NCBI-ProteinID:
XP_033501175
LinkDB
All DBs
Position
16:complement(22621177..22634549)
Genome browser
AA seq
549 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDTPVEEGGKPKVQYGV
EFTFDADARVAITLYCQAFEEFSNGMAVYSPKNPSLVSETVHYKRGVSQQFSMPSFKIDF
SEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHEEHSSTDSVPP
GFEPISLLEALNGLRSVSPAIPSAPLYDEINFSGGLGGDSRQLSSPEHLSDGSLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTLLSSSPAPTDATATEDVAESLSPDDEDR
MHSGGDILQDCSSEHSSLTKTESDPPGDLSLPGSSESTESLKSQSTNCSSQPLLCPTSSL
HMEDEHLNP
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggggtccattctgagtcgcagaatcgctggcgttgaggatatcgatatccaggccaac
tcggcctatcgatttccaccgaaatctgggaattattttgcgagccacttcttcatggga
ggagagaaatttgacacaccacatccagagggatacctttttggagaaaacatggacctg
aattttcttggaaataggccagtgcagtttccatatgtgacgcctgcaccacatgagcct
gtgaagaccctgaggagcctggtgaacattaggaaggactctctgcgtttggtcaggtat
aaagatgactctgacacaccggtggaggaaggcggaaaaccaaaggtccagtatggtgtt
gagttcacctttgacgcagatgctcgggtggccatcaccctctactgccaagcgtttgag
gagttctccaatgggatggcagtgtacagcccaaagaatccatcgctggtctctgaaact
gtgcattacaagcgcggcgtgagccagcagttctccatgccgtctttcaaaatagacttc
agcgagtggaaagaggaagatctgaactttgacctcgaccgaggagtgtttcccatggta
atccaagctgtggttgacgaaggggacgattgcctcggacatgctcacgtgcttttggca
gcctttgaaagacacgttgatggcagtttctccgtcaagcctctgaagcagaagcaaatc
gtggaccgtgtgagctacctcttacaggagatctatgggattgagaacaaaaacaaccaa
gaaaccaagccatcagatgatgagaacagtgacaacagcaacgagtgtgttgtctgtctg
tctgacctgagagatacactcatcctgccctgcagacacctgtgtctctgcaactcctgt
gcagacactttgcgttaccaggccaacaactgtccgatctgcaggctgcccttcagagcc
ttgctgcagatcagagctgtgaggaaaaagcccggtgctctttcccctgtgtccttcagc
ccagtcctggctcagactatggaccatgaggagcactcaagcacagactcggttcctccc
ggctttgaacccatctcgctgttggaagctctgaatggtctgcggtcagtgtctcctgcc
atcccatctgcccccctctacgatgagatcaacttctcagggggtcttggaggtgacagc
agacagctgagctccccagaacatttaagtgatggaagtctgcagaaaggcaaagtcagc
aagtcacctgacagcacccttaggtctccatcctctcccatccaagaggaagatgaggag
aagctgtctgagatgtctgacgctcagccacacacactgctgtccagcagccccgccccc
actgacgccacagccaccgaggacgtggcagagtccctgtctccagatgatgaggacagg
atgcattctggaggagacatcctacaggactgcagcagtgagcacagcagcttgaccaaa
acagagagcgacccaccgggcgatttgtctctgccagggtcatccgagtcaacagaaagc
ctgaaaagtcagagcacaaactgctccagccagcctctcctgtgtcccacgagcagcctt
catatggaagatgagcacctcaacccctga
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