Epinephelus lanceolatus (giant grouper): 117268653
Help
Entry
117268653 CDS
T07331
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ely04054
]
117268653
Pattern recognition receptors [BR:
ely04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117268653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
LRR_6
NOD2_WH
LRR_1
LRR_4
LRR_8
7TM_GPCR_Srsx
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
117268653
NCBI-ProteinID:
XP_033501181
LinkDB
All DBs
Position
2:48666188..48704412
Genome browser
AA seq
1167 aa
AA seq
DB search
MKRIHQRPDSPEPEPEPEPDPSCVSPETDQSHEHDIDVKGQKVSAAHFQQQREKSPVPSC
VSMKSDRSKDHWIDFKDGLPSSDLLFQQQREKSPVPSCVSMKSDRSKDYWFDFKDGLPSS
DLLFQQQREKSPVPSCVSMKSDRSKDHWIDFKDGLPSSDLLVDQESSEVPSGQSAQQHQT
HLDSIFMLLEENILTFVKNELKKIQKVLSSDYPECLESQREDEEVLDGEDEEQRRSSREA
FLKITLNFLRRMKQEELADCLQSRSYSAVCQRKLKSNLQKKFQCVFEGIAKAGNPTLLNQ
IYTELYITEGGTAEVNDEHEVRQIETASRKPDRPETTIRQEDIFKASPGRDEPIRTVMTK
GVAGIGKTVLTQKFTLDWAEDKANQDIQFTFPFTFRELNVLKEKKYSLVELVHHFFTETK
EAGICRFEEFQVVFIFDGLDECRLPLDFHNNEILTDVTESTSVDVLLTNLIRGKLLPSAR
LWITTRPAAANQIPPDCVDMVTEVRGFTDPQKEEYFRKRFRDEEQASRIISHIKTSRSLH
IMCHIPVFCWITATVLEDVMKTREEGELPKTLTEMYIHFLVVQTKVKNIKYDGGAETDHH
WSPESRKMIESLGKLAFDQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFKEERGLY
QDKVFCFVHLSVQEFLAALHVHLTFINSGVNLMEEQQTTSRWSKVFRDKQNLKYLHQSAV
DKALQSPNGHLDLFLRFLLGLSLQTNQRHLRGLLRQTGSSSQTNQETVQYIKKKINQDLS
AERSINLFHCLNELNDRSLVEEIQQSLSSGRLSTDKLSPAQWSALVFILLSSEEDLDVFD
LKKYSASEEALLRLLPVVKASNKALLSGCNLSERSCEALSSVLSSQSSSLRHLDLSNNHL
KDSAVKLLSDGLKSSHCTLETLRLSDCNLSERSCEALSSVLSSQSSSLRHLDLSNNHLKD
SGVKLLSDGLKSSHCTLETLRLSGCNLSERSCEALSSVLSSQSSSLRHLDLSNNHLKDSA
VKLLSDGLKSSHCTLETLRLSVCNLSERSCEALSSVLSSQSSSLRHLDLSNNNLKDSGVN
LLSDGLKSSHCTLETLSLSGCLITEEGCVSLASALSSNPSHLRELDLSYNHPGDSGVKLL
SAGVKDPHWILDTLRYEEACCSHIHSV
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggatccatcagagaccagactcacctgaacctgaacctgagcctgaacctgac
cccagctgtgtgtctcctgagaccgaccagtcacatgaacatgacatcgatgttaaagga
caaaaagtctctgctgcacatttccagcagcagagagaaaagtcccctgtacccagctgt
gtgtccatgaagagtgatcggtcaaaagatcattggattgacttcaaagatggactccct
tcttctgacctgcttttccagcagcagagagaaaagtcccctgtacccagctgtgtgtcc
atgaagagtgatcggtcaaaagattattggtttgacttcaaagatggactcccttcttct
gacctgcttttccagcagcagagagaaaagtcccctgtacccagctgtgtgtccatgaag
agtgatcggtcaaaagatcattggattgacttcaaagatggactcccttcttctgacctg
ctagtggaccaggagagctcagaggttcccagtggtcagtctgcccagcagcatcaaaca
cacctggactccatatttatgctgctggaggagaacatcctcacttttgtgaagaacgag
ctgaagaagatccagaaggttctgagttcagattacccagaatgcttagagagtcagagg
gaggatgaggaggtgttggatggtgaggatgaagagcagaggaggagcagcagagaggca
tttctgaagatcacactgaacttcctgaggagaatgaagcaggaggagctggctgactgt
ctgcagagcagaagttattctgcagtctgtcagcgtaaactgaaatctaacctgcagaag
aagttccagtgtgtgtttgaggggatcgctaaagcaggaaacccaacccttctgaatcag
atctacacagagctctacatcacagagggagggactgcagaggtcaatgatgaacatgag
gtcagacagattgaaacagcatccaggaaaccagacagaccagaaacaaccatcagacaa
gaagacatctttaaagcctcacctggaagagatgaaccaatcagaacagtgatgacaaag
ggagtggctggcattgggaaaacagtcttaacacagaagttcactctggactgggctgaa
gacaaagccaaccaggacatacagttcacatttccattcactttcagagagctgaatgtg
ctgaaagagaaaaagtacagcttggtggaacttgttcatcacttctttactgaaaccaaa
gaagcaggaatctgcaggtttgaagagttccaggttgtgttcatctttgacggtctggat
gagtgtcgacttcctctggacttccacaacaatgagatcctgactgatgttacagagtcc
acctcagtggatgtgctgctgacaaacctcatcagggggaaactgcttccctctgctcgc
ctctggataaccacacgacctgcagcagccaatcagatccctcctgactgtgttgacatg
gtgacagaggtcagagggttcactgacccacagaaggaggagtacttcaggaagagattc
agagatgaggagcaggccagcagaatcatctcccacatcaagacatcacgaagcctccac
atcatgtgccacatcccagtcttctgctggatcactgctacagttctggaggatgtgatg
aagaccagagaggaaggagagctgcccaagaccctgactgagatgtacatccacttcctg
gtggttcagaccaaagtgaagaacatcaagtatgatggaggagctgagacagatcatcac
tggagtccagagagcaggaagatgattgagtctctgggaaaactggcttttgatcagctg
cagaaaggcaacctgatcttctatgaatcagacctgacagagtgtggcatcgatatcaga
gcagcctcagtgtactcaggagtgttcacacagatctttaaagaggagagaggactgtac
caggacaaggtgttctgcttcgtccatctgagtgttcaggagtttctggctgctcttcat
gtccatctgaccttcatcaactctggagtcaatctgatggaagaacaacaaacaacatcc
cggtggtctaaagtcttcagagacaaacagaatctgaagtatctccaccagagtgctgtg
gacaaggccttacagagtccaaatggacacctggacttgttcctccgcttcctcctgggt
ctctcactgcagaccaatcagagacacctaagaggtctgctgagacagacaggaagtagc
tcacagaccaatcaggaaacagtccagtacatcaagaagaagatcaaccaggatctgtct
gcagagagaagcatcaatctgttccactgtctgaatgaactgaatgatcgttctctagtg
gaggagatccaacagtccctgagttcaggacgtctctccacagataaactgtctcctgct
cagtggtcagctctggtcttcatcttactgtcatcagaagaagatctggacgtgtttgac
ctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcc
tccaacaaagctctgctgagtggctgtaacctctcagagagaagctgtgaagctctgtcc
tcagttctcagctcccagtcctccagtctgagacacctggacctgagtaacaaccacctg
aaggattcagcagtgaagcttctgtctgatggactgaagagttcacactgtacactggaa
actctcaggctgagtgactgtaacctctcagagagaagctgtgaagctctgtcctcagtt
ctcagctcccagtcctccagtctgagacacctggacctgagtaacaaccacctgaaggat
tcaggagtgaagcttctgtctgatggactgaagagttcacactgtacactggaaactctc
aggctgagtggctgtaacctctcagagagaagctgtgaagctctgtcctcagttctcagc
tcccagtcctccagtctgagacacctggacctgagtaacaaccacctgaaggattcagca
gtgaagcttctgtctgatggactgaagagttcacactgtacactggaaactctcaggctg
agtgtctgtaacctctcagagagaagctgtgaagctctgtcctcagttctcagctcccag
tcctccagtctgagacacctggacctgagtaacaacaacctgaaggattcaggagtgaac
cttctgtctgatggactgaagagttcacactgtacactggaaactctcagtctgtcaggc
tgtctgatcacagaggaaggctgtgtttctctggcctcagctctgagctccaacccctcc
catctgagagagctggacctgagctacaatcatccaggagactcaggggtgaagctgctg
tctgctggtgtgaaggatccacactggatactggacactctcaggtatgaagaggcctgc
tgcagccacatacactcagtctga
DBGET
integrated database retrieval system
