Epinephelus lanceolatus (giant grouper): 117268700
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Entry
117268700 CDS
T07331
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ely01001
]
117268700 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ely04054
]
117268700 (ciita)
Enzymes [BR:
ely01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117268700 (ciita)
Protein kinases [BR:
ely01001
]
Serine/threonine kinases: Other
TAF1 family
117268700 (ciita)
Pattern recognition receptors [BR:
ely04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117268700 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
nSTAND3
AAA_16
nSTAND_NTPase5
NB-ARC
AAA_22
ABC_tran
Motif
Other DBs
NCBI-GeneID:
117268700
NCBI-ProteinID:
XP_033501229
LinkDB
All DBs
Position
16:32057501..32083618
Genome browser
AA seq
1637 aa
AA seq
DB search
MTQFEEVLDGVRLALTWASPAEIQALLEDLVEGQIISEAYGKSLIWQQLTEGISPAACKV
GSDLRGSTTHWHLDQGQLSQVKNLGSGKSIGRAVSSVGEHVSMRSRLKIHLLCEHQVDPR
LNQELRGGPVTDECFNLFSTPMGRDNQCSLIFDDENTELLRSAELMQKPVSDNERVFKGN
LEDEKEWLEQVEEAARRIAVPLWQHWDRGQKMLLPLVPASMTAASCATSENTARDGKAQC
PVFNMEEETELAVACRTLDLYADNFDYTEVGITDPSFTLCTDGAAKGLCFSTYDSVATTG
LNHLNISGAERNASPAQACAATVTNITDRLQGILDACRVADSTTEVDLLCLMEGAQCGTD
AEFTEDIAHLISPCAPTDTQTDAQDDSFYSSVDQSMTLDNVENVCRAEERVDSQWGAKMQ
DVSQDPFLCLGDLPDDLSEFLNDDYLGKFVDTGALFDDPCLNCEEELITCCDLPPPMELP
GFDSLQQIQEDKVTSTTNTRRKRSRASRSQPRTDENTPSRPKRQKRAGRPKTEEPQAELT
VTQDADTGSELSSPETAAPPSTPPRILHLHPSIQFITIPDNPGYQVVQTLSLSPPVITLP
LPNTAAAPTYILVPAASPPFKRQVPPLSPIDGAVAPVQMSSSPLGSLSETASKAMSPTCT
SPQSPSIEMSACKESPLPQSPTVTDIPLVKDYIQEAKAHMSQTCQDMEAGLSLTSHYVDV
PVSQRETRSGKSTNKTLDKELIIMGDTDRQKTLLGPSQIFEGSNGDKPKRYIALLGNAGM
GKTTLIRKLCLDWSRDCIPQFDFVFLLDGKSLSLTEATFSLKTLLLNLSSFAPSCMDPEA
VYTQILAAPKRVLIIFDGFGELRDFETLLQTQEKDIIASLQKDSKAQNFTVRHLYSGILQ
RILLPGCTLLLSTRPKGTATQLLRRTDSILEVCGFSPTDVETYLSQYFTDPDLRASALHC
LKNCSYLHLLCWNPGLCRLVCLVLEQCRSSEDLPRTLTGLCHQVLRLIMEMDRKSMHSQA
ESQSETSMQTEEEAQTEISSSSQAKTQHKNTRRKSRAQVRPGSRTQRARRTKEQDKEEDD
GDGEGMRSAGEEADRTEEKELLSQLSSLAWESVKANTCTLPTGRTISAKLKAFGHRTGLF
FSCHLRAGQVVASGETEGGGREDSEEMGTGKKGKKGTVSEHADTSDDHILLWANPFLQSY
LAGVHLSLSRTITDRAFHPTLPFQSGQKGRRRPQREELELTQRFAVGLLFHDRTELRRLH
SHTEKTFRDMVTAKQALVTKHLEGLSYSDLSPAQVLEACHYVYEANSTHGDGNRDSGSTQ
LVAHLAANLPEVLTFRGVPLKPSDVFAVQHVLEKGGTEGRRFCLDLEDSGIQISGLRALV
GLHNINTYRACIADVITLWEQLEQSGEEGLLQETVSKFKIHPLKATQVCHIEHLAKLVNI
HVHKRLSDSSSQSDSILAEGIPAVKELRKLEFELGPEKGPLALLKLWGLLPDLQNLQHLD
LENSKIGDKGAEKLADALVSLCSLEILNVSQNCIGDQGMKRLATTLRDLPKLHCLSLYSN
VISDEGAESLAAVLPHMASLTDLDVKYNKLTDVGAQSLAASLRNCKKMKTLRMWNQCIPY
GVFERLQHQDSRIQSWQ
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atgacccagtttgaggaggtcctggacggagtgcggctggctctaacctgggcctctccc
gccgagatccaagcactcctggaggatttggtggaagggcagataatttcggaggcctac
ggcaagagcttgatttggcagcaacttactgaggggatctcacctgcggcgtgtaaagtg
ggatctgatctgagaggatcgaccacacattggcacctcgaccaaggtcagctcagccag
gtgaagaatttagggtcaggaaagtctataggaagggctgtatcatcagtgggtgagcat
gtcagcatgaggtctaggctaaaaattcatctactttgtgaacatcaagttgatccaaga
ctaaatcaagaattgaggggaggaccggtgacggacgaatgcttcaatctcttttctacc
ccgatgggacgtgacaaccagtgcagtcttatttttgatgacgaaaatacagaactgctg
aggagtgcagaattaatgcagaagccagtaagtgataatgaaagagtgtttaaggggaat
ttggaagatgagaaggagtggttagagcaggtagaggaggcggctaggaggatagctgtt
cctctgtggcagcactgggacagaggacagaagatgctgctgccactggttcctgccagc
atgactgctgccagctgtgcaacaagtgaaaacacagcgcgagacggcaaagcacaatgc
cctgtttttaatatggaagaggaaacagagcttgcagtcgcttgcaggacattagacttg
tacgctgacaactttgactacacagaggtggggatcactgacccgagcttcacactgtgt
acagacggagcagcaaaaggcctctgtttctcgacatatgactctgtggcgactactgga
ctgaatcatttgaatatctccggagcagaaagaaatgcttcacctgctcaagcctgtgca
gcaacagtcacaaacatcacagacaggctgcagggcattctggatgcctgccgggtagct
gacagtacaacagaagtggacctgctctgcttgatggaaggcgcacaatgtggcacggat
gcggaatttacagaagatattgcacatttgatttctccatgtgcaccaacagatactcaa
actgacgcacaagatgactctttttactccagcgtggatcagagcatgacattagacaat
gtagaaaatgtttgcagggctgaggagagggtggactcacagtggggtgccaagatgcag
gacgtcagtcaggacccgtttctctgtttgggagatctaccagatgatttatcggaattc
ctgaatgatgattaccttgggaagtttgtggacacaggagcgctctttgacgatccctgt
ctcaactgtgaggaagaactcatcacctgctgtgatcttcccccgccaatggagctgccc
ggctttgacagccttcagcagatacaggaggacaaagttacaagcacaacaaacaccagg
agaaaaagatccagagcttcccgatcacagccacgcactgatgagaacacaccatctagg
ccgaaaaggcagaaaagagcaggtcgaccaaaaaccgaagagccacaggctgagctgact
gtcactcaagacgctgacacagggtcagagctgagttcaccagagacggcggccccccca
tccactcccccaagaatccttcatctccatccctccattcagttcatcaccatcccagac
aatccgggatatcaggttgttcagacactgagtctctctcctccagttattacacttcca
ctccccaacacagctgctgcgcctacttacattttagttcctgctgcttcaccacccttc
aaacgccaagtgccacccctctccccgattgacggtgcagttgcaccagtccagatgagt
tcatccccattaggatctctgtcggaaaccgctagcaaagccatgtctcccacttgtacc
tcaccccagtctcctagcattgagatgtctgcatgtaaggagtcaccccttcctcagtct
cccactgtcactgacattccacttgtaaaggactacatccaggaagccaaagcccatatg
agtcaaacctgccaggatatggaggcaggccttagcctgacctctcattatgtggatgtg
ccagtgagccagagagagactcgctctggaaaaagcacaaacaaaaccctggataaggag
cttatcatcatgggagacactgatcggcaaaagaccttgctggggccgagtcagatcttc
gaaggctcaaatggagacaaacccaaacgctacatagcgctacttggcaatgctggtatg
ggaaaaaccaccctgatcaggaagctgtgtctcgactggtccagggactgcatcccacag
tttgactttgtcttcttattagatggaaaatcactctctttaacagaggcgacctttagc
cttaagaccctcctcctaaacctctcctcctttgctccttcctgcatggaccccgaggca
gtgtacactcagatcctcgcagcccctaagcgcgtgctgatcatttttgatgggtttggc
gagttgcgggactttgaaactcttctccagactcaggaaaaagacattatagcatcattg
cagaaagacagtaaagcacagaacttcacagtaagacatttatactctggcatccttcag
aggatcctccttccaggctgcactcttctgctctcgacacggccaaaaggcactgccacc
cagctactccggcggacagacagcattttggaggtgtgtggcttcagtcccacagacgta
gagacatatttgtctcagtacttcactgatcctgacctcagagcatctgctttgcactgc
ttaaaaaattgcagctatctccacctcctctgctggaaccctggactgtgtcggttagtc
tgcttggttttagaacagtgcagaagttcagaggacctcccgagaactttaactggactc
tgccatcaagtgcttcgtctgataatggaaatggacagaaagagcatgcactcacaggct
gaatctcagtcagaaacatctatgcaaacagaagaagaagcccagacagaaatctcaagt
agttctcaagcaaaaacgcagcacaaaaacactcggagaaagtccagagcacaagttcgc
cctggctcgcgcacccaacgagcaaggaggacaaaagaacaggacaaagaggaagatgat
ggcgatggggaggggatgaggagtgctggagaggaagcagacagaacagaggagaaagag
ttgctgtcccagctgagttctttggcctgggagtcagtcaaagcaaacacctgcaccctc
cccacaggacgaaccatatcagccaaactcaaggcgtttggccacaggacagggcttttc
ttctcttgccacctgagggcggggcaggttgtcgcaagtggtgagacagagggaggggga
agagaggatagtgaagaaatgggaactggaaagaaaggaaaaaaggggacagtctctgaa
catgctgacactagtgatgaccacatcctgttgtgggccaatccttttcttcagagttac
ctggcaggggtgcatttgtctctatcaaggactataacagaccgtgcctttcatccaacc
ctccctttccagtcaggccagaagggacgtcggagaccccaaagggaggagcttgagctc
actcagcgatttgcagtcggactcctgttccacgacagaacagagctgcggaggcttcac
tcacacacagagaaaaccttcagagatatggtcaccgccaagcaggctttagtaacaaaa
caccttgagggtctttcctacagtgacctgagccccgcccaggtcctggaagcatgtcac
tatgtgtatgaggcgaactccacgcatggtgatggtaacagagacagtggcagcacacaa
ttagttgcccacctggcagcaaatcttccggaagttctgacatttcgtggagttccactt
aagccgtcggacgtgttcgctgtgcagcatgttctcgaaaagggtggaactgaaggtaga
aggttctgtttggatctggaggattcggggatacagatttctggactcagagctctcgta
gggctccacaacatcaacacatacagggcatgcattgctgatgtcatcaccttatgggag
cagttagagcagagtggtgaagaaggtctcctacaggagacggtgtccaaattcaagatc
catcctctgaaagccacacaggtgtgtcacatagagcacctggcaaagctggtgaacata
catgtgcacaagaggctgtcagacagttccagccaatcagattcaatcctggcagaggga
ataccagccgtcaaagagctacgcaagctggagtttgagcttggtccagagaaaggtcca
cttgctcttctcaagctgtgggggctcctgcctgatctacaaaacctccagcacttagat
ctagaaaacagcaagataggtgacaaaggagcagagaaactggccgatgctttagtctca
ctctgttctctggagatactcaatgtgtcacagaactgtatcggagaccaggggatgaag
agactggcaaccacactgagggatctgcccaaactgcactgtttaagtctctacagtaac
gtgatttctgatgaaggggcagagagtttagcagctgtcctcccacacatggcttcgctc
actgacctggatgtgaagtacaacaagctaacagacgttggcgcacaaagcttggcagcc
agtctgagaaactgtaagaaaatgaaaacactgaggatgtggaaccagtgtattccatac
ggagtgtttgagaggcttcaacaccaggacagccggatccagtcctggcagtag
DBGET
integrated database retrieval system
