Epinephelus lanceolatus (giant grouper): 117268888
Help
Entry
117268888 CDS
T07331
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117268888
Cell adhesion molecules [BR:
ely04515
]
Immunoglobulin superfamily
DSCAM family
117268888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
C1-set
Ig_6
Sp38
Receptor_2B4
ChitinaseA_N
DUF1461
DUF6034
Motif
Other DBs
NCBI-GeneID:
117268888
NCBI-ProteinID:
XP_033501526
LinkDB
All DBs
Position
2:2658253..2729339
Genome browser
AA seq
2116 aa
AA seq
DB search
MGGAEAPLISPPCLAGQQGWRDLRGAQSPVQHGDPPGQKTAPHTCQDCQIFLKNIPAIYG
MWLVTLLLLYSLQEVHSEDVGSTRLYFVNASLQRVTYSSSVGVSLPCPAGGTPSAILRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSYIHDNDYFCTAENQAGKIRSPNIRIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPAAVQEYVSVVSWERDTVSIVPGNRFSLTSFG
ALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPNESSPTILDSFQAGEVQAG
QSIELPCIAGGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLRQEDSGSYACEVTNSF
GSKEVSGQLHVIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYTINWYSNTEPIVPDQH
ISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPRIVSSFSERVVN
PGEPFSLMCAAKGAPPPSITWTLDDEPVVRDSTYKTSQYTLSDGLTVSHVNVSSPLIRDG
GVYRCVARNSAGSAEYQARINVRGPPRIRPMRDITAVAGRNTYITCRVIGYPYYSIKWLK
DGMQLPDNHRQVVFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTVHVTVKVPPLIQ
PFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVAIETKEFMSSLQISK
VTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDCIYGKAGVLNCSVEGYPP
PKVMWKHAKGVGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLCQASNGVGSDIS
KSMILTVKIPAMITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDTVIDAERNPRYS
ITINKKGDEVISTLKLNPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREV
KDRSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQANIVELHPACVY
SIRMYSYNKIGRSLPSKELTISTEEAPPDGPPMDVILQPMTSQSIRVTWRAPKKELQNGV
IRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSS
TEINATTLEDVPSEPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWSLFPDGG
GCCGGQAHWPMQKWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQ
TREDLPGPPAGIKAVPSSPSSVVVSWLPPHKPNGVIRKYTIYCSSPGSGQPAPSEYEANP
EMLFYRITHLTRGKQYHIWAAAVTTAGRGNISSKVTVEPAGKVPAKILSFGGTVTTPWMK
EVRLPCSSVGEPAPTIKWTKDSEDSAIPVTADSQRQILSNGTLVLRSVKAEDSGYYTCTA
TNTLGFDTIIVNLVVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNT
EEWRDVFISSSERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPVFNKDQ
PLLTHINSTHAGLNLQGWTSGGCPITDMMLDFRPKGTWAWQSLKANSTTQLFLSELREAT
WYELKMKACNSAGCGNQSSQFATTDYDGSTIPPIKSARGEGDDVKKLFSIGSPVILVTLG
VALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPRLHIDIPRVQLL
IEDKEGIKQIGEDKAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSGPLIDMSDIRPG
TNPVSRKSIKSAHSSRNRYSSQWTLSRPSQSQSTASARTLTSDWRTMGSHGITATESDSY
SASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTITECFISDSSSDQ
MTTGTNDPADSMTSLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRANKSEFCNLPL
YMKTDPFFRKQGELHDPCPAVPPREASIRSLTQRAYHTQGRHKTLDPAKQQVLTLGHSGL
GSLGASSGTATLPQRTLTMPSSNTAATASTSSTSSNPTNSNKVGGSRDSLLESSSSALGR
LQKQSVGAYSKSYTLV
NT seq
6351 nt
NT seq
+upstream
nt +downstream
nt
atgggcggggccgaggcgcctctcatttcccctccatgcttagcggggcagcagggctgg
agagacctccggggagcacagtcgccagtccagcacggagacccgcctggccaaaaaacc
gcgcctcacacttgccaggattgccaaatattcctgaaaaatatacctgctatttatggc
atgtggcttgtaactttactcctgctgtactctctccaagaagtacacagtgaggatgtg
ggctccaccaggctgtactttgtgaatgcctccctgcagagggtaacctactccagctcg
gtgggggtgtccctgccctgtccagcagggggcacccccagtgccatactgcgctggtac
ctggccaccggcgacgacatctacgacgtgccccacatccgccacgtgcacgccaatggc
accctacagctgtaccccttctcgccctccgcctacaacagctacatccacgacaacgac
tacttctgcacagccgaaaaccaagccggcaagatccgcagccccaacatccgcatcaaa
gctgttttcagggagccctacactgtgcgggtggcggaccagcgttcgatgcggggcaac
gtagctgtgttcaagtgcctcatccccgccgccgtgcaggagtacgtcagcgtcgtgtcc
tgggagagagacactgtttccatcgtaccaggtaacaggttctcgctgacctccttcggg
gctctttacatctctgatgttcagaaggaggacgccctctccacgtaccggtgcatcacc
aaacataagtacagcggcgagacgcgccaaagcaatggagcgcggctctctgtaatggac
cccaacgagtcctcacccaccatcctggacagtttccaagcaggggaggtgcaggcaggc
cagagcatcgagctcccctgcatagcgggagggtaccccagccccactgtgcgttggctg
aaagatggtcgcccactgccctcagatgcccgctggacacggcgtttgacagggctgacc
atcagtgacctgaggcaggaggacagtggcagctacgcatgcgaggtcaccaacagtttt
ggctcaaaggaggtgtctggacagcttcatgttatagatccacttcgtgtgaccttgtcc
cctaagaatctgaaaactggcatcagcagcaccctgttcttcacctgcactgtggagggc
tccccagaatacaccatcaactggtacagcaacacggagcccattgtccccgaccagcac
atctccatccagggacaacacaacgacaccttgcagatcactgcagcacagaagtttcac
tctggggcttaccagtgcttcgcctcccgaaagggccacactgctcaggacttttccatt
attctgctcgaggatggaactcctcgtattgtgtcttccttcagcgagcgggtggtgaac
cccggcgagcctttctccctcatgtgtgctgccaaaggagccccgcccccctccatcacc
tggacgctggacgacgagcccgtggtgcgagactccacctacaagaccagccagtacacc
ctgtcggacggcctgaccgtgtcacacgtcaacgtcagcagcccgctcattcgagatggg
ggagtgtatcgttgcgtcgcacgcaactcggccggtagcgccgagtaccaagcgcgcata
aacgtaagaggtccaccccgaatcagacccatgcgggacatcaccgcagtggcgggcagg
aacacctacataacgtgccgcgtgattggctacccgtattactccatcaagtggctgaag
gacggcatgcagctgcctgataatcatcgtcaagtggtgtttgagaacggcaccctgagg
ctgacggacgtgcagaagggcgcggacgagggcacctacttgtgtagcgttctgatccag
ccccaggtgtcaatcaaccagaccgtccatgtcactgtaaaagtgccgccgctcatccag
cccttcgatattccctctacctcagtggggaagctcatgtacattgcctgcgtggtgtca
tctggggacatgcccatacgcatcacctggcacaaagacggccagctcatcgtgccaggc
tctgcctctggcgtcgcaatagagaccaaagagttcatgagctccctgcaaatatccaag
gtgacactgaagcacaacggaaactacacctgcatcgccagcaacgccgccgccaccgtc
agctgggaaagacagttgattgtcactgtgccaccgcgttttgtggtgcagcccaacaat
caagattgcatctatggcaaagctggagttctcaactgctctgtggagggttatccacct
ccgaaagtcatgtggaaacatgccaagggtgtaggaaaccctcagcagtaccatccggtc
cctttgactggccgtatccagatcatgtcaaacggctctctgctcatccgacatgtgctt
gaggacgaccgtgggtactacctctgtcaggcctctaacggagtgggctcagacatcagt
aagagcatgatcctcactgtcaagattcccgccatgatcaccagccaccccaacaccacc
atggcgaggaagggccagaccaaggagctgaactgcacagcgcggggtgagcagcccatc
atcattcgctgggagagaggagacaccgtcatcgacgctgaaagaaacccccgttactcg
atcaccatcaacaagaagggggacgaagtcatctctacgcttaagctgaacccagccgag
cgaggagattctgtcttcttctcctgccacgcaatcaactcctatggagagggtcgaggg
ctcattcaactcactgtgcaagaaccaccagatcctcctgagctggaagtgagggaggtg
aaggaccggagcatgaacctgcgctggatccaaaggttcgatggaaacagcatcatcacc
agctacgacatcgagtacaagaacaagtcagactcctgggatcacatgtacacaaccaga
aacatctcacccaccaacaaccaggccaacattgtagagctgcacccggcatgcgtttac
agcatccgcatgtactcctacaacaagataggccgcagccttccaagtaaagagctcaca
atcagcactgaggaagcaccgccggacgggccgccgatggatgtaatcctccaaccgatg
acttctcagagcatacgggttacatggagggctcctaagaaggagctgcagaatggtgtg
atccgaggctaccagatcggttacagagagaacggtccgggcagcaacggccagtacagc
atagtggaaatgaaagctacaggggacagtgaagtgtacaccttggacaacctaaagaag
tttgcccagtacggggtcgtggtccaggccttcaacagagcagggacgggcccatccagt
actgagatcaacgctaccacgttggaagatgtgcccagtgagcctccgcagaacgtgcga
gccatctctgtgacgtcggacgaggcggtgatcacatgggcagagcctccacggctgacg
ctgcacggtgtgctgaaaggctaccgggttgtgttttggtccctcttccccgacggaggt
gggtgctgtgggggccaggcccattggccaatgcagaaatggggagagatgcaaaatatc
accaccacacgtgaacaggtggagctgcgagggttggagaagttcaccaactacagtgtt
caggtgctggcctacacgcaagctggagacggggtccgcagcaacgtcttgtatatccaa
acccgcgaggaccttcctggtccaccggctggcatcaaggcagttccctcctctccaagt
agcgtggtcgtgtcctggttgcctcctcacaaaccaaacggtgttattcgcaagtacacc
atctactgctccagtccggggtctgggcagccggcgcccagtgagtacgaagccaacccg
gagatgctattctaccgtatcacgcacctcacccgtggcaaacaataccacatctgggct
gcagccgtgacaactgccggcagaggcaacatcagctcaaaggtcacagtggagcctgct
gggaaagtcccggctaagatcctgtcctttgggggcacggtgaccacaccctggatgaag
gaagtgcgtctgccctgcagctcagttggagagccggcccccacaattaaatggaccaaa
gacagtgaggactctgccatcccggtgacggctgacagtcaacggcagatcttatccaac
ggcacactggtgctacgttcagtcaaagcagaggattctgggtactacacctgtacggcc
acgaacaccctgggctttgacaccatcatagtcaatctggtggtgcaagttccccctgat
cagcctcgtctgaccgtctccactacctccacctcctccatcaccctggcttggatccct
ggggacaatgggggaagctccatcagaggatttgtgctgcagtattctgtggacaacaca
gaggaatggagggatgtgttcatcagctccagtgagcgctccttcaggctggacaacctg
cgctgtggaacctggtacaaggtcaagctggccgccaagaacagcgtgggctcagggcgc
atcagcgagatcattgaggctaagacacatggaagagagccagtgttcaataaagatcag
ccgctgctcactcacatcaactccactcacgcagggctcaacctgcagggctggaccagc
ggtggctgccctatcaccgacatgatgctggacttcaggcccaaaggtacctgggcctgg
cagagcctcaaggccaactctaccactcagctcttcctcagtgagctgcgcgaggccacc
tggtatgagctcaaaatgaaggcatgcaacagtgctgggtgtggcaaccagagctcccag
tttgccaccaccgactatgacggcagtacaatccctcccattaaatcagctcgtggagaa
ggggatgatgtgaagaagctgttctccatcggctctcccgtcatcctggttactctgggt
gttgctctgctcttcattatccgcaagaaacgcaaggagaagaggcttaaacgacttaga
gatgctaagagcctcgctgagatgcttatcagcaagaacaatcgcagtattgacactcca
gtgaagggccctcctcaaggaccaaggctgcacattgacatcccacgtgttcagttactc
attgaggacaaggaaggcatcaaacagataggggaggacaaggcagcagtgccagtgaca
gacacggagttcagccaatcggtgaatccgcagaacttctgtacaggcgtgtctctgcac
caccaagcccttatccagaactcagggcccttgattgacatgtcagacatccgcccaggc
acaaatcccgtgtccaggaagagtataaaatcagcccacagctccaggaacagatattcc
agccagtggacgctgagccgccccagtcagagccagtcaacagcctcagcacgaactctg
acctccgactggcggacgatgggctcgcatggcatcaccgccactgagagcgacagctac
agcgccagcctgtcgcaagacacagataagggtcgaaacagcatggtgtcgacggagagc
gcctcctccacttatgaggagctggcgagggcctacgagcacgccaagctggaggagcac
ctgcagcacgccaagttcaccatcacagagtgtttcatctccgatagttcatctgaccaa
atgaccacaggtaccaatgacccggcagacagcatgacctcgctcagcacgccgtctgaa
ccaggcatctgccgcttcactgcctcaccgcccaaaccgcaggactatgaccgcggtaaa
aatgtggcagtgcccattccccaccgcgcaaacaaaagtgaattctgcaaccttcccctc
tatatgaagacagacccattcttccgcaaacaaggggagctgcatgacccgtgcccagct
gtgccaccgcgggaagcctcaatccgcagcctgacgcagcgggcgtatcacacccagggc
cgtcacaagactctagaccctgccaagcagcaggtcctgacgctgggccattctgggctg
ggcagcttgggtgcgagctcaggcactgccaccttgccccagaggactctcaccatgccc
agctccaacactgcagcaacagcttccacttccagcacgagcagcaaccccaccaacagt
aacaaggtggggggctccagagactcgctgctagagagcagctcctctgcactggggaga
ctgcagaaacagagtgtgggggcctactccaagtcatacacgctggtgtag
DBGET
integrated database retrieval system
