Epinephelus lanceolatus (giant grouper): 117268908
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Entry
117268908 CDS
T07331
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04137
Mitophagy - animal
ely04144
Endocytosis
ely04145
Phagosome
ely04148
Efferocytosis
ely05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117268908 (rab5c)
04145 Phagosome
117268908 (rab5c)
04137 Mitophagy - animal
117268908 (rab5c)
04148 Efferocytosis
117268908 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117268908 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117268908 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ely04147
]
117268908 (rab5c)
04031 GTP-binding proteins [BR:
ely04031
]
117268908 (rab5c)
Membrane trafficking [BR:
ely04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
117268908 (rab5c)
Endosome - Lysosome transport
117268908 (rab5c)
Exosome [BR:
ely04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117268908 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
117268908 (rab5c)
Exosomal proteins of colorectal cancer cells
117268908 (rab5c)
Exosomal proteins of bladder cancer cells
117268908 (rab5c)
GTP-binding proteins [BR:
ely04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
117268908 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
117268908
NCBI-ProteinID:
XP_033501552
LinkDB
All DBs
Position
16:complement(17124539..17139021)
Genome browser
AA seq
220 aa
AA seq
DB search
MAGRGGPARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGGPGAGGRARGGVDLQEAAPQGRSGQCCGGGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcgaggcggaccagcacggaccaacggcactgcagcaagcaacaagatctgc
cagtttaagctagtgctgttgggggaatcagcagtggggaagtccagcttggtgctgcgc
tttgtcaaaggccagttccacgagtaccaagagagcaccatcggagctgccttcctcaca
cagacggtatgtttggacgacacaacagtcaagtttgagatctgggacactgcaggacag
gaacggtatcacagcttggcacccatgtactacaggggagcccaggcagccatcgtggtc
tatgatatcaccaacacagatacattcacacgtgcgaagaactgggtgaaggagctccag
cgacaagccagccccaatattgttattgcactggcaggaaacaaagcagatctggccaac
aagagagccgtagacttccaggaagcacaagcatatgcagatgacaacagtttgcttttc
atggagacttcagccaagactgctatgaatgtcaatgagatttttatggctatcgccaag
aagcttcctaagaacgagcctcagggtggaccgggcgcaggtggacgagccagaggcggt
gtggacctgcaggaagctgcaccacagggcagaagcggccagtgctgtgggggcgggaac
taa
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integrated database retrieval system