Epinephelus lanceolatus (giant grouper): 117268929
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Entry
117268929 CDS
T07331
Symbol
alyref
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03013
Nucleocytoplasmic transport
ely03015
mRNA surveillance pathway
ely03040
Spliceosome
ely05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117268929 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
117268929 (alyref)
03015 mRNA surveillance pathway
117268929 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117268929 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117268929 (alyref)
03041 Spliceosome [BR:
ely03041
]
117268929 (alyref)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117268929 (alyref)
TREX complex
117268929 (alyref)
Spliceosome [BR:
ely03041
]
Complex C
Other components
EJC/TREX
117268929 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117268929 (alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
117268929
NCBI-ProteinID:
XP_033501591
LinkDB
All DBs
Position
16:complement(30362477..30365611)
Genome browser
AA seq
270 aa
AA seq
DB search
MADKMDMSLDDIIKQNRQQRGGGRGGRGRGRGGSGGGRGGGPGRLGGGGGGFGGRGGGSG
PMRNRQNLNRARGRPTPYSRPKQLPDKWQHDMFDNGFSGFSGPAGGGGGAGVETGGKLLV
SNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADALKAMKQYNGIP
LDGRPMNIQLVTSQIDTQRRPMQGLNRGGGGMNRNRGGSFRGMQRGRGGRGSGGAGGRGR
GGRGGSSKQQLSAEELDAQLDAYNARMDTS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaatggatatgtctctagacgacattatcaagcagaacaggcagcagaga
ggcggaggccgcggtggaagaggtcgaggccgcggaggttcaggtggcggccgaggagga
ggccctgggcgtcttggaggcggcggcggaggatttggaggccgaggcggcggatccggc
cccatgaggaaccgacagaacctgaaccgcgctagaggcagaccaacgccttacagcagg
cctaaacagcttccagataagtggcagcatgacatgtttgacaacggcttcagcggcttc
agtggccctgctggaggtggaggaggagccggtgtggaaactggagggaagctccttgtc
tcgaatctcgactttggggtctcagatgcagacattcaggaactttttgctgaatttggg
actctgaagaaggctgcagttcattacgaccgatcaggaagaagcctgggaacagcagat
gtccacttcgaacggagggcagatgctctcaaagccatgaaacagtacaatggcatccca
cttgatgggcggcctatgaacatccagctcgtcacatcacaaattgacacacagaggcga
cctatgcagggtctgaacagaggcggaggaggcatgaacagaaatcgcgggggcagcttc
agaggaatgcagagaggccgcggagggcgtggctcaggtggtgctggaggaagaggtcgg
ggcggccgtggcggtagcagcaaacaacagctgtcagcagaagaactcgacgcacagtta
gacgcctacaatgccagaatggacaccagctaa
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integrated database retrieval system
