Epinephelus lanceolatus (giant grouper): 117269403
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Entry
117269403 CDS
T07331
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ely03021
]
117269403 (chd1)
03036 Chromosome and associated proteins [BR:
ely03036
]
117269403 (chd1)
Transcription machinery [BR:
ely03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
117269403 (chd1)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
117269403 (chd1)
SLIK complex
117269403 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
117269403
NCBI-ProteinID:
XP_033502282
LinkDB
All DBs
Position
17:complement(37314731..37376664)
Genome browser
AA seq
1795 aa
AA seq
DB search
MAGRSEDESVSNSSGESSNSDDESGSGSGSASGSASGSSSSSSSSSSQSGSSDSGSGSDS
GSPSDSDTEKSKEKMEPPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQQQQQQQQRQSSS
NSGSDEDSSSSDGSDSSSGSKRRRNTGSSDSGSGSGSGSGSGSDSSAEDNSDETASDYEP
SHKIKSRKPPTKMNFRNGKKSSTQKKKSQKCSSSEDEDDNYKKVASAGPRRQATVNISYK
EDEELKTDSDDLVEVLGEDVPQPEEDEFETLERVMDSRIGRKRATGSATTVYAVEADGDP
NTNFSSNKEAGEIQYLIKWKNWAHIHNTWETEETLKLQNVKGMKKLDNFKKKEQERKKWL
KAASPEDIEYFNCQEELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSW
EDGALIARKFQKCIDDYMSRNQSKTIPSRDCKVLKQRPRFVPMKKQPAYIGGDGLELRDY
QLDSLNWMAHSWCKGNSCILADEMGLGKTIQTISFLNYLFNEHQLYGPFLLVVPLSTLTS
WQREIHLWAPQMNVVVYLGDISSRNMIRTHEWMHVHSKRLKFNILLTTYEILLKDKSFLG
SVNWAFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEK
FHSWELFEEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQ
YYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEDNEFLNRADALQQLI
RSSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLRSRQFLFQRLDGSIKGEMRK
QALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK
RQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSAPFNKEE
LSSILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANF
SMMEDEEIDIDSERSQRSWDDIIPEEQRRRMEEEERQKELEEIYLLPRMRNCAKQISFNA
SEGRQSRNRRYSGSDSDSPSDRKRPKKRGRPRTIPRENIKGFSDAEIRRFVKSYKKFGGP
LERLDAIARDAELVDKSEHDLKRLAETVHNGCVRTLRENPCGPEKNSGGRRGKVKGPTFR
ISGVQVNAKLVISHEEELAPLHKAIPADPEERKKYMIPCHSKAAHFDIEWGKEDDSSLLI
GIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQ
KQAGTANSRKRKPRSKKSKTLKPTKTDEVLKSTSSDPPSDKRSDDEDEIEDEKEVTPVKA
PNRRSRTDRGVVKEEEDEDEEPEQEEVSSSGEREVKEKEIKKEGKKEKKEESWDSKETKE
PKEKKETKPLEAVHKQEESIEKNEVRTEVRERTKKASDVPVHITASGENVPVSEESEELD
QRTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYSNPDQ
IKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQENAQAMEQNMRNINTHGYKHADIER
LKDNSHQDESSRDSYSSDRHQPSGRLHESSSSSKERHSSESHRKTTGGESRKRPYSSFSN
GKDHRDRDHYRPDSRDRDRQDRYYNDSKHRKLEEFRSSRDHRLDIKDHSHSDHRSSYRYH
SDWQTEQRASASGPRSPRDQRSPYDSRSPMGHRSPFDYSSDHKSTPEQIWSSRKT
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgcagcgaggatgaaagtgtaagcaacagtagtggagaatccagtaattct
gatgatgaatccggttctggatcaggctctgcatcagggtctgcctcaggctccagttcc
agctcctccagcagcagcagccagtcagggagcagcgactcaggtagtggctcagactct
ggcagcccatcagattctgacacagagaaatccaaggagaagatggagccgccaaataag
tcaaacatcgatggagctgagttctggaagtccaacccaagtatcctagcagtgcaaaga
tctgctatgctcaggaaacagcagcagcagcagcagcagcagcagagacaaagctcgtcc
aatagtggatctgatgaggactcatcaagtagcgatggatctgactcatcaagtggatcc
aaacggagaagaaatacaggctcctctgactctggatcaggttctggatccgggagtggt
tctggatcagactcatctgcggaggacaacagtgatgaaactgcgtcggactatgagccg
agtcacaaaatcaaaagcagaaagcctccaaccaagatgaattttcgaaatgggaagaaa
agcagtacccaaaagaagaaatcccagaagtgttcttcctctgaggatgaggatgataac
tacaagaaggtggcatctgctgggccacggcggcaggccacagtcaacatcagctacaag
gaggacgaggagctaaaaactgattcagacgacctggtggaagttctgggtgaagatgtc
ccgcagcctgaggaagacgagtttgaaacactggagagagtgatggacagcaggatagga
aggaaaagagcaacaggaagtgcaaccactgtatacgctgtagaagcagatggggaccca
aataccaacttcagttctaacaaagaggctggtgagatccagtatttgataaagtggaag
aactgggcacatatccacaacacctgggagacagaggagactctcaagttacagaacgtc
aagggcatgaagaaactggacaatttcaagaagaaggaacaggaaaggaaaaaatggtta
aaggcggcttcaccagaggatatagagtatttcaactgtcaggaagaactgatggatgac
ctgcactcgcagtaccagcttgtagagagaatcatagggcattcaaaccagaagtcagcg
gctggttacccagactacttgtgcaagtggcagggtttaccatactcagagtgtagctgg
gaagatggtgctctgatcgctagaaagttccagaaatgtattgatgactacatgagcaga
aaccagtccaagaccattccatccagagactgcaaggtactcaaacagagacccaggttt
gtgcccatgaagaagcagccagcttacataggaggtgatggactagagctccgagactac
cagttggacagtttgaactggatggcacactcctggtgcaaaggcaacagttgcatcctt
gctgatgagatgggtttagggaagaccatccagacaatctccttcctcaactacctgttt
aatgagcaccaactgtatggacccttcctgctggttgtgcctctctcaacactaacctcc
tggcagagagaaatccatctctgggcccctcagatgaatgttgtggtctacctaggagac
atcagcagcaggaacatgatccggacacatgagtggatgcacgtccatagcaagagactg
aaatttaacatccttctcacaacatatgagattctcctcaaagacaagtcatttttgggc
agtgttaactgggcattcattggtgtggatgaggctcaccgactgaagaatgatgactcc
ctcctctacaagaccatgattgacttcaagtccaatcacaggcttctgatcactggaacg
ccactgcagaactctctgaaagagctctggtccctgctgcacttcattatgcctgagaag
tttcactcttgggagctgtttgaggaggagcatggtaaaggcagggattcgggctacacc
agtctgcataaagagctggaaccttttttactgcgccgagtcaagaaggatgtggagaaa
tctcttcctgccaaagtggagcagatcctcagagtggagatgagtgctatccagaaacag
tattacaaatggatcctgaccaggaactacaaggccctgagtaaaggtaccaaaggcagc
acttcaggcttcctgaacatcatgatggagctgaagaagtgttgtaaccactgttacctt
atcaaacccccagaggacaatgagttcctcaacagagctgacgccttacagcaactgatc
cgcagcagtgggaagctggttctgttggacaaactgctggtgcgtttgaaagagcgaggt
cacagagttctcatcttctcccagatggtacggatgctggatatcctagctgaatacctg
aggagccgacagtttctctttcagagattagacggctccatcaaaggagaaatgaggaag
caggcgttggatcattttaatgctgagggctcagaggatttctgctttttgttatcaacg
cgagcgggtggtctgggaatcaatctggcatcagctgacacagtagtcatttttgactca
gactggaacccccagaatgatcttcaagcccaggccagagcccacaggatcggacagaaa
agacaggtgaatatttaccgtctggtgacgaagggctcagtggaggaggacatcattgag
agggcaaagaagaaaatggtgctggaccaccttgtcattcagaggatggatactacgggg
aaaactgtcctccatactggtgctgctccctccagttcagcccctttcaacaaggaggag
ctgtcttccatcctgaagtttggtgctgaggagcttttcaaagaaccagagggtgaggag
caggaacctcaggaaatggacattgatgagatcctcaaaagagctgagaccagggaaaat
gaccctggcccctccacagtgggagaagaactgctgtctcagttcaaggtggctaacttt
tccatgatggaagatgaggaaatagatattgactctgagcgtagtcagcggagttgggac
gatatcattcctgaggagcagaggaggaggatggaagaggaggagagacagaaggagcta
gaggaaatctacttgctgcctcgcatgaggaattgtgccaaacagataagctttaacgcc
agtgagggccggcagagcaggaacaggaggtactctgggtctgacagcgactctccctca
gaccgaaaaaggccaaagaaacgaggacggcctcggaccattccgcgagaaaatatcaag
ggcttcagcgatgcagagatccggaggtttgtcaagagttacaaaaagtttggaggacca
ctggaaagattggatgctattgctcgtgatgctgaacttgtggataagtctgaacatgat
ctgaaacgcttggcagagactgttcataacggctgtgtgagaacactacgagaaaacccc
tgtggaccagaaaagaactcaggaggcaggagagggaaagtgaagggccctacattcagg
atttctggagtccaggtgaatgccaagcttgtcatctctcatgaggaagagctggctcca
ctccacaaggccattcctgctgaccctgaagagagaaagaagtatatgattccatgccac
tcgaaggcagcccactttgacattgagtgggggaaggaggacgactccagccttctaata
ggaatctatgagtatggttacggcagctgggaaatgatcaagatggatccggacctcaat
ctcacacacaagctcctaccagacgaccccgacaagaagccacaggccaaacagctccag
accagagcagactacctcatcaagttgctaagcaaggacctggccaaaaaagaagcacag
aaacaagcagggacagccaattcacggaagaggaaaccaagaagtaaaaagagcaaaact
ctgaaaccaactaagacagacgaggtgctaaagagcacgtcctcagatcccccatcggac
aagaggtcagatgatgaggatgaaattgaggacgaaaaggaggtgactccagtgaaggca
ccaaacagacgtagccgaacagacaggggggtggtgaaagaggaggaggacgaggatgaa
gagcctgagcaggaggaagtttcttcatcaggggagagggaggtcaaagaaaaagagatc
aaaaaagaaggcaaaaaggagaaaaaggaggaaagttgggacagtaaagagacaaaggag
ccaaaagagaaaaaagaaacaaagcctctggaggcagtacataaacaagaggagagcata
gaaaagaatgaagtaaggactgaggtacgagaacgaacaaagaaagcctctgatgtgccg
gtccatataacagcaagtggagagaatgttccagtatctgaggagtctgaggagctggac
cagaggaccttcagtgtgtgtaaagagaggatgcggccggtaaaagcagccctgaagcag
ctggacagaccagagaaagggctgtcggaacgtgagcagctcgaacacacaagacagtgt
ctgataaagatcggagaccacatcacagagtgtctgaaggagtactcaaaccctgaccag
atcaaacagtggagaaaaaacctgtggatatttgtttccaaattcactgagtttgacgcc
aggaagctacataaactgtataagcatgcaatcaagaaaagacaagagaacgctcaggca
atggagcagaacatgagaaatataaacacccacggctacaaacatgcagatattgaaagg
ctgaaggacaactctcaccaggacgagagcagcagggacagctacagctcagacaggcat
cagccttcagggcggttacatgaaagcagcagcagcagtaaggagagacacagctctgag
tcccacaggaagaccacgggaggggagtccaggaaaagaccatactcctccttcagcaac
ggcaaagaccaccgagacagagaccactacagaccagacagcagggacagagacagacag
gacagatactacaatgacagtaagcacaggaagctggaagagttccgctctagcagagac
catcggctggacataaaggatcactcccattcagaccaccgctcttcctaccgctaccac
tcagactggcagacggagcagcgagcctcagccagcgggccccgctctccccgagaccag
cgctcaccctacgactctcgctcacccatggggcaccgctccccttttgactactcgtca
gaccacaagagcacaccagagcagatctggagcagccgcaagacataa
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integrated database retrieval system
