Epinephelus lanceolatus (giant grouper): 117269566
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Entry
117269566 CDS
T07331
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117269566
03041 Spliceosome [BR:
ely03041
]
117269566
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117269566
Spliceosome [BR:
ely03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117269566
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117269566
NCBI-ProteinID:
XP_033502559
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Position
17:35610910..35629016
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AA seq
387 aa
AA seq
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MDDDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKNT
NETTSTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVSPIQQVQMPQQNTVSFAAQP
YSQWGQWYGNTAAQQIGQYVPNGWQVPSYGVYGQTWDQQGYNHLHAGAGWTGVGAVSNGG
MVEPGQGVNGTVLTNQAGMSTAGYHTH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaccaacccaaaaccctgtatgtggggaatctgtcccgggacgtgacagag
gcactcattttggagttgtttggccagattggaccctgcaagagctgtaaaatgatagta
gatacagcaggtcatgatccttactgctttgtggagttctatgagcatagacatgccact
gccacaatcgcagccatgaatggtcggaaaatactgggtaaggaggtcaaggtcaactgg
gccacgacaccaaccagccaaaagaaagacacaagcagtcacttccatgtttttgttgga
gatctaagtcctgaaatcaccacagatgacataaaagcagcttttgctccatttgggaaa
atatcggactgtcgagtggtgaaagacatggccacaggtaaatctaaaggctatggcttt
gtctccttcttcaacaaatgggatgcagagaacgccatacagcagatgggaggacagtgg
ttgggaggaaggcagatcaggaccaactgggccacaaggaagcctgctcctaaaaataca
aatgagacaaccagtaccaagcagctgtcttttgatgaggtggtcaaccagtccagcccc
agcaactgcaccgtctattgcggaggagtcaccacaggtctcacagagcaaattatgaga
cagaccttctcaccttttggccaaataatggaaattcgtgttttcccggacaaaggctac
tcattcgtgagattcaactctcatgaagcagcagctcatgccattgtgtctgtcaatggt
acatccatagagggctatgttgttaagtgttactggggcaaagaaacgacagacatggtt
agccccatacagcaggtacagatgcctcagcagaacacagtgagcttcgcagcgcagccc
tactctcagtggggtcagtggtacggcaacacagctgcacagcagattggtcagtatgta
cccaatggatggcaggtgccgagctatggagtctatggacagacctgggatcagcagggc
tacaatcatttacatgctggtgccggttggacaggtgtgggcgctgtgagcaacgggggc
atggtggagcccgggcagggagtcaacgggacggtgctaaccaaccaggctggcatgagc
actgctggctaccacacccactga
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