Epinephelus lanceolatus (giant grouper): 117269782
Help
Entry
117269782 CDS
T07331
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 54-like
KO
K25553
cilia- and flagella-associated protein 54
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ely03037
]
117269782
Cilium and associated proteins [BR:
ely03037
]
Motile cilia and associated proteins
Sperm associated proteins
117269782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
Phostensin
Motif
Other DBs
NCBI-GeneID:
117269782
NCBI-ProteinID:
XP_033502978
LinkDB
All DBs
Position
2:17747758..17774359
Genome browser
AA seq
2487 aa
AA seq
DB search
MDLPASYYGKLDKRNPVVVNAERDINSFITLMRRVASSTSHDNGSYAKGIKVLVEIWKKY
KHRLPSKMYQERMLQIADFLFGIKMYQLALWQGYSLHLLQFSSVNITDITDVDHFMACFF
PDGFDTDQDTFAMKIRAMQGWALCIFEQEKKHSVLSQEGLCKLLDLLKFIRIMMQAFQQH
EHLCWQIYNGSLHIFNICRYLMTMNCSAQALEYLLWASTSLELSIPLMTAEYLPWIVTLY
CAVCHCYYDNQAAVQAEEFARRALGKINELAKQEVQNEVPTTRETQRAFKEASIKLEAMI
FKRAVYEVKRRPKNRFKTKSTLKDIPNAPWPRTTTERMLMGLFDSSAAQFLSILEALWDN
TRCPLQMKMPDEPELQEVILELLSAGVSILSGDTASSESLSALTPAATLMDLAISGENKV
PILSAVRFIKMLFQYKQPDAFTELAREMLQVLSGVEGQSFRRAELELALLDSFNSLLSSQ
RSHPREDNMTDDRHKSSFSMSDEFLVLVDTLHKSVCRSAPEVQPDGDLVLDVLLFLWGKV
KLVIQRDQLQNQNITYCLEKIDNYDKWLWCLSVLCEVAFACDLATVDCIMTAEMIHTLAI
LLESAAECSNQCPGAGEADCEGVKPSSFFILKSSSTELLQKVCEVAERGIEALAKGAATL
LPRDCSAIIDSAFMQKFGPLHPSTPSLLAPASSEKGNEDDEISEKEKEAETKTESESDIR
GAQRTQSTHVFLLATDLHLELDIIHHRASLKLLQRNAVTESVLLDRIKKNKVSKALFLIQ
KASLEYNNMEPNNSNKTKSLLEEASTLIEKAGVEERRLYISTTPKTSAESKDERKNEKEE
SPPPPPILLSRTDHFFTFTPAPYNFKGQVCWYQLCGRAVGGINQKVRLADCSLPGTGNMV
PVISGEXVLKVEGLEPNQKYVFAVAAYNSEGKLLGNTIGGSTAPLLASLPVPLLSTWTHL
AQVAFQTEQYAIAKRACSELWIHYTYTDDGSPSTQDRLAVTGLHVQTLQCSSTHLLQLFF
TSIFIETEINIQQGSLYCDSFSDSGPFIWEQEARLAECERMLVAMDLAMWLNDGSAALQA
VASCYGLLAPLIFHQITCDPVVQVLKKCLIVLEENSGLLKQKWSGNATESFMHMIACITY
YLSKASRVLGEHQMASMLMDCGRRLLQEVYDAQLQISRLASKASKTTDHATIKGELQLKA
LQRKNKKRITSEAALTADNETARPLTGCEDPTKLYALISSSSLEDAYQNVIKLRYKAYFT
EYAALLLQRAMEEGPPDLVLKWGQAVFEFLSRRDHLMGVSTKCSEGKSQSKRKSSAQAQK
GNEPAQQNKKAPSHDDARKKLKQNMPQSMLKRLRTSREMQVVENLLSMMSSVVQRHKNQL
KLRKVCCEERVWKSQLNYSMAEAHLAQLYQGLDQLYGGALQHSYSQLNPLCFSLAYSGVL
VWKSQRQQSSKYEVTSERDPSHSGLREYVALHKERSTKEAVRVDDSVTEESCEDGEDSSG
IVEEQIETHRVTAASLLDSLNKAALHLRRAMVLAHRGSHWTTLQRVCQTVWDQSCRINVL
EQGVAQLEPPSPITADQLHTTFTPLLVLATDLIMDMMKRLELWSLYDSDLTEEELESSLH
FSSPLDNSTLVDLRWVCTLVLHTLERLHYSEKWESLAHFALVFNSHTRERYALTVTPLLV
HAQRRLLERISSFGGPPVPQPHHVKTQKATGKEVTYRSYADSQLLIGRSPHPAQQLPSRK
KAALTNSTHPDVVDLKDSEKQRSMSLVCVPLDVEDTLSSYRQALERRPHCLHVFQHSRSL
LLLLLAYTNPCFATQLQHCQSRSLTHSASLVDFSPLVLPTPNIQPCSLTEEDFSTPNALY
SIPIGPDHLPTVKAAYSISIKYLQANNHDSLRVLALHEMGNLQFYSGNTRAAHSYWSKAV
DCALQCSGAVEKWDGLSFWGGSLQQTLQQAGMWGCLQAAGLTGKIAQYILTSDISQRTKC
CLMSAHLFKCVLCCSLAQPQADLQYASHTIEDELLPGVDPFSEPHRVHLSTTVTSLNFVC
HWLFTTGYYITLLPILALYLHFVGTVCRDFQRYVEGKILKMRALTELCLFTEAVKEALQL
TQGTGVRLPHGYNIAKDNLQPVRMFYSNKSLLDNSEALEELVNCDFAPEVQTLYGSTLCL
RFNLARVQLILALTNTVHSPSVPDDAEGEACASTTTCLVDSEPHEQDRLDTEGSCLQTEK
PKVLTFDTEEKLTPERIKFILLEGASSLLHSISQQLTSQSCNEVVNLELVIASNLLKADL
YLQQGRAALSSETAISSLVLMETSPVIMRGILPGAQKPASEVLHARTGSERGTKDCGVSN
PLDGDCPRAVEAGERIGIPLWLQCRLALVRSLAAQIPGAAALVSGKNINEEAAQVLQEGL
HECARWGELDIQALLMVEGAELEAQRGKPDDSMAMLQHVKLILWVSSLMLHLTSLKLLPG
LLCSFLFRLYICNSIYGCAVLVIKIQY
NT seq
7464 nt
NT seq
+upstream
nt +downstream
nt
atggacctaccggcttcatattacgggaaacttgataaaagaaacccagttgttgtaaac
gctgaacgagacattaactcgtttataaccctgatgagacgggtcgcttcttccaccagc
catgacaacggctcttatgctaaagggattaaagtcttggtggagatatggaaaaagtac
aaacatcgattgccttcgaagatgtaccaggagcgcatgttgcagattgcagattttctc
tttgggataaagatgtaccaactcgctctttggcagggctacagtctccacctgctgcag
ttcagctcagtaaatattactgacatcacagatgtggaccacttcatggcctgcttcttc
cctgatggttttgatacagaccaagatacctttgccatgaagatacgtgccatgcagggc
tgggccttgtgtatatttgagcaggagaaaaagcacagcgttctcagccaggagggactc
tgtaaactgctggatttgctgaagttcatcaggatcatgatgcaggcatttcagcaacat
gagcacctctgctggcaaatatataatggttcattacacatattcaatatctgccgttac
ctgatgaccatgaattgtagtgcacaggcattggagtaccttctgtgggcaagcaccagt
ttagagctgtccatccctctgatgaccgctgagtatctgccatggattgtcactctctac
tgtgccgtctgccactgttactatgacaaccaggctgctgtgcaggcggaggaatttgcc
aggagagcccttggaaaaatcaatgagctagcaaagcaggaagtgcagaatgaagttccc
accaccagagagactcagagagctttcaaagaagcctctatcaagctggaggccatgata
ttcaagcgtgcagtctatgaggtcaaaaggagacccaaaaacagattcaaaaccaaaagt
accctgaaggacatacccaatgcgccatggccccgcaccacaacagagcgcatgctaatg
ggcctgtttgacagcagtgcagcgcagttcttgagcattctggaagcactctgggacaac
accagatgcccactgcagatgaagatgccagatgaaccagagctgcaggaggtgatcctg
gagctcctgtctgctggcgtcagtatcttgtctggagatacagcttctagtgagtctctt
agtgcgctgacaccagcagccactctaatggatttagccatttcaggagaaaacaaagta
cccatcttgtctgcggtgaggtttattaagatgttgtttcagtacaagcagccagatgct
ttcactgaacttgccagagagatgctgcaggttttgtctggtgtggaggggcagtcattc
agaagggccgagctggagcttgctttacttgacagtttcaacagtttgctgtcttcccag
aggagccatcctagagaggacaacatgactgatgacagacacaagtcttcattctcaatg
agcgatgagttccttgtcctggtagacaccctgcacaagtctgtttgtcgctctgctcct
gaggtgcagccagatggagacctggttttggatgttttgttatttctttggggtaaagtg
aagctggtgatccagagggaccagctgcagaaccaaaacattacatactgccttgagaag
atagataattacgacaagtggctgtggtgtctgtcagtgctgtgtgaggtggcctttgct
tgtgacctggcaactgttgactgcataatgacagcagagatgatacacacattggccata
ctgctggagagtgcagctgaatgcagtaatcagtgtccaggagctggagaagcagactgt
gagggtgtgaaaccaagctcgttctttatacttaagagttcaagtacagagctgcttcag
aaggtgtgtgaggtggcggagaggggtattgaagctctagcaaagggtgcagctacactg
ttgcctcgtgattgctcagcaatcattgactctgccttcatgcagaaatttggtcccctc
catccatcgactccctctctgttggctccagcgtcatcggaaaagggaaatgaagatgat
gaaataagtgagaaggaaaaagaagcggaaactaagacagaatcagaatcagatattaga
ggtgctcaacgcactcagtccacacatgtgtttctgctggccacagaccttcatctagag
ctagacatcatccaccacagggcttctctcaagttactgcagcgaaatgcagtcacagag
tctgtgctgttggatcggatcaagaagaacaaggtgtccaaagctcttttcctgatccag
aaagcctcgctggagtacaacaatatggagccaaataacagcaacaaaaccaagagtctg
ctcgaggaggcctccaccctgatagagaaagctggggtggaagagagaagactgtacatc
tctaccacccctaagacttcagctgaaagcaaagatgaaaggaaaaatgagaaagaggaa
agccctccgccacctcccatcctgctctcacgcactgaccacttctttacctttacccca
gcaccttataacttcaagggacaagtgtgctggtaccagctctgcggccgtgctgttggc
ggcattaaccagaaagtccgcctcgcagactgcagcctgccaggaactggaaatatggta
ccagtaatatctggtgaatgagtgctgaaggtggaaggcctggagcccaaccagaagtac
gtgtttgctgtagcagcctacaacagtgaaggcaagctactgggcaacaccataggaggg
tcaacagccccgctgctggcatccttgccggtaccactgctctctacatggactcacttg
gcacaggtggctttccaaacggagcagtatgccatcgcaaagagagcctgcagtgaactg
tggatccactatacctacaccgacgatgggtcccccagcactcaggatagacttgctgtc
acagggctgcatgtccagaccctgcagtgctcctctactcacctattacagttgttcttc
acttccatcttcattgagacggagatcaacattcagcagggatcgctttattgtgactca
ttcagtgacagtggaccatttatttgggaacaggaagctagactggcagagtgtgagcga
atgcttgttgccatggacctggcaatgtggttgaatgacggcagcgctgccttgcaagct
gtagctagctgttacggcctcctggcacctctaatcttccatcagatcacttgcgaccct
gttgttcaggtgctaaaaaagtgcttgatagttttggaggagaattcaggtcttctcaaa
caaaaatggtcaggaaacgccacagagtcatttatgcacatgatagcctgcatcacttac
tacctgtccaaggcatcgcgtgtgcttggggagcatcagatggcctctatgttgatggac
tgcggtcgaaggctgcttcaagaggtctatgatgcccagctgcagatcagtagacttgcc
agtaaagcttcaaagaccacagatcatgctacaatcaagggtgagctgcagctgaaggct
ctgcagcggaagaacaagaaaagaatcacatctgaagcagctctcaccgcagacaatgag
actgcacgcccactgacaggctgtgaggatcccaccaaattgtatgctctgatttccagc
agctcactggaggatgcctatcaaaatgtgattaagctcagatacaaggcatattttact
gagtatgcggcactgctcctccagagagccatggaagaaggccccccagaccttgtgtta
aagtgggggcaagccgtatttgaatttctttccaggcgtgaccacctgatgggagtgtcc
acaaaatgttcggagggaaaaagtcagagtaaaagaaaaagtagtgctcaggcccagaaa
ggaaatgaaccagcacagcagaacaagaaagcaccttcacatgatgatgcaagaaagaaa
ctgaagcagaatatgccacaaagcatgcttaagagactgagaacaagcagagaaatgcag
gttgtggagaacctgctgagcatgatgtcgtctgtggtgcaacgacacaagaaccagctt
aagctgaggaaagtgtgctgcgaggagagagtgtggaagtctcagctcaattacagcatg
gctgaggcacatttagcacagctgtaccagggtctggaccagctgtatggaggagccctg
cagcacagttacagtcagttaaatcccttgtgtttctctctggcctactctggtgtcctg
gtgtggaagtcacagcgacagcagtcctctaaatatgaggttacctcagagcgagacccc
tctcactctggtctgagggaatatgtggctttacacaaagagaggagcacaaaggaggca
gtcagagtggatgactctgtcacagaagagagttgtgaggatggagaggactcctctgga
attgtggaagagcagattgagacacacagagtcactgctgcctctctgctggactcactt
aacaaagctgctttacatctcagaagggccatggtgttggcacatcgtggcagccactgg
accactctgcagcgtgtgtgtcagactgtgtgggaccaaagctgtagaatcaatgtccta
gagcagggagttgctcaacttgaacctccctccccaatcacagcagaccaactgcacacc
accttcaccccactactggtgctggccactgacctaatcatggacatgatgaagagactt
gagctgtggagtttgtatgacagtgacctgactgaggaggagctagagtccagtcttcac
ttctcatcccctctggataacagcacactggtggacctgcgttgggtctgcaccctggtg
ctgcacactctggagcgtcttcattacagtgaaaaatgggaaagcctggcccactttgcc
ttagttttcaactcacacactcgagaacgttatgccttgaccgtaactcctctactagtc
catgctcagaggaggctgctcgaaagaattagttcttttggaggaccaccagttcctcaa
ccacaccatgtcaagacacagaaggccactggaaaggaggtaacttacagaagctacgca
gactcccagctgctcattgggcggagccctcaccctgcacagcagctgcccagtcgcaaa
aaagcagcactcacaaactctacacacccagatgtagttgatcttaaagattcagagaaa
cagcgctccatgtcccttgtttgcgttcctctggatgtggaagacacgctgagctcttac
cgtcaagctcttgagagaagaccacattgtctgcacgtcttccagcatagccgctcatta
ctgctgctacttcttgcatacacaaatccctgctttgcgacacagttgcagcactgtcag
agcagaagtctcacccattcagcaagcctggttgatttcagccccttagttttgcctact
ccaaacatccaaccttgcagcctgaccgaggaggacttcagtactccaaatgctctttac
agcattcccatcggccctgaccacttgccaactgtcaaagctgcatactccatctccatt
aagtatctccaggccaacaatcatgactccctcagagttctggcactgcatgagatggga
aacctacagttctacagtggaaacacacgggctgcacactcatactggagtaaagctgta
gactgtgccttacagtgctcaggtgctgtagagaaatgggacggtttgtcattttggggt
ggctccctacaacaaactctgcaacaggctggcatgtggggatgtctacaggctgctggg
ctcactggcaagattgcacagtatatcttaacgtctgatatcagccaacggaccaagtgc
tgtctaatgtctgcacacctgtttaagtgtgtgctgtgttgctcactggctcagccccag
gccgacctccagtacgcctctcacaccatcgaagatgaactgctcccaggagttgacccg
ttctctgaaccccacagggttcaccttagcaccactgtaaccagccttaactttgtctgc
cactggcttttcaccacaggctactatatcacgctgctgcccatactcgccctttacctt
cattttgtggggactgtgtgcagagatttccaacgctatgttgagggcaaaatacttaag
atgcgtgccctcacagaactgtgtctgttcactgaagctgtaaaggaggcacttcagctc
acacaaggaacaggagtccgtctgcctcatggttacaacattgccaaagacaatctccaa
cctgtgaggatgttctacagcaacaagtctctcttggacaattctgaggctttggaggaa
cttgtgaactgtgactttgctccagaggtccaaaccctgtatggatccacattgtgcctc
cgattcaaccttgctcgtgttcaactcatcctggcactcactaacactgtacatagcccc
tctgttccagatgatgctgaaggagaagcttgtgccagcacaacaacttgtctggtggac
tcagaaccccatgaacaggacaggctggacactgagggctcctgtctacagacagaaaag
ccaaaagtgttgacctttgatacagaggagaagctcacaccagaaaggataaagttcatt
ttgctagaaggagcatcctccttgttgcactccatttctcagcagctcacttctcagtcc
tgtaatgaagtggttaacctagaactggtgatagcgtccaatcttctaaaggcagaccta
tacctgcagcaaggacgtgctgcacttagttctgagacggcaatttcatccttggtgctg
atggagacgtctcctgtaatcatgagaggaatcttacctggcgctcagaaacctgcgtct
gaggtcctacatgcccggactggaagtgaacgaggtactaaagattgtggtgtttcaaac
cccttggatggagactgtcccagagcagttgaggccggtgagagaattggaattcctctg
tggctgcagtgccgtctggctctggtccgcagcctggctgcacaaatccctggtgctgct
gctcttgtctcagggaagaacatcaatgaggaggcagctcaggtgttacaggagggtctt
catgaatgtgcacgctggggagaactggatattcaagcccttttgatggtcgaaggtgca
gaactggaagcacagagaggcaagcctgatgacagcatggcaatgctgcagcacgtcaaa
ctgattctgtgggtcagcagccttatgcttcacctcaccagcctcaagctccttcctggt
ctactgtgtagttttctcttcaggctgtacatctgcaacagcatttatggctgtgcagtt
cttgtgatcaagatccagtactaa
DBGET
integrated database retrieval system