Epinephelus lanceolatus (giant grouper): 117269838
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Entry
117269838 CDS
T07331
Symbol
itga1
Name
(RefSeq) integrin alpha-1
KO
K06480
integrin alpha 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04510
Focal adhesion
ely04512
ECM-receptor interaction
ely04518
Integrin signaling
ely04810
Regulation of actin cytoskeleton
ely04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117269838 (itga1)
04518 Integrin signaling
117269838 (itga1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117269838 (itga1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117269838 (itga1)
04810 Regulation of actin cytoskeleton
117269838 (itga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ely04147
]
117269838 (itga1)
04515 Cell adhesion molecules [BR:
ely04515
]
117269838 (itga1)
04090 CD molecules [BR:
ely04090
]
117269838 (itga1)
Exosome [BR:
ely04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117269838 (itga1)
Cell adhesion molecules [BR:
ely04515
]
Integrins
Integrin alpha subunits
117269838 (itga1)
CD molecules [BR:
ely04090
]
Proteins
117269838 (itga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
117269838
NCBI-ProteinID:
XP_033503082
LinkDB
All DBs
Position
19:complement(14213233..14271031)
Genome browser
AA seq
1185 aa
AA seq
DB search
MLGLSHFTLTTAAVVVLLTCVLSFNVDQKNGLSFSGPVEDMFGYTIQQFENSEGKWVLIG
SPLSGQPAKRTGDVYKCPVGKGDNTCVKLELPKNTTVPNLHEVKENMTMGTTLVTNPNGG
FLACGPQYGYMCGQQQYISGVCANVSDSFQILNSVAPAVQECGQELDIVMVLDGSNSIYP
WSSIIDFLRRFIEKIEIGPKLSQVGIVSYGETVTHRVNLSQFDNTRALLDFVEELPQQTG
FKTMTFLGIDTARKEAFMPERGARPGVKKVMVIVTDGESHDFHNLDKVIEECDDDDIERF
GIAVLGDYNRQNKSSEEVQKFIKEIASISSEPLHDHFFNVSDEVALLSIVDALGSKIFAL
EATTGNFTSSFEMEMSQAGFSAHTSKEGVLLGAVGAYDWNGTVVMHTAGGTIIPGKTQFY
DPETEAGYEGLAGYLGYDVQSASTPDGVLYITGAPRYNHTGRVVIYHLDINNNIVVSQIL
KGEQIGSYFGSVLQTVDVDGDTNTDLLLVGAPMYMGTDRDEQGQVYVYKLNQDGQFKHEF
TLKPLNQSCCTAHTATCTNKNEPCGARFGTAIAAVSDLNLDGFNDVAIGAPFENDHRGAV
YIYHGDKTSLKEKFVQRIPAGGDGEKVKFFGQSIHGAMDLNGDGIIDVAIGGLGGASLFW
SRDVAELRANMTFDPVKINLQQAQYQCEHSGRKSVCVKTEVCFAYRVKSDQQDVDADADI
RYSLTLDALRAKARASFIDSVDKSDRKITRIFTIKDRERKCVEETFMMSARLDFRDPLMV
SLEFEKADEDEGPVLDESLPRSINKTIPLVDCGSDEKCIADLSLKAEPSVTQMVIKTNKD
KLDVNINIRNSKDNAYNTKVALSFTPNINYVKVEPEMACTLNNTKVECAVGYPFLGSNVE
EDFKVKFQVNPNHVQEVIQINVTATSDSEELESTLHDNSVLISIPVKYEAGLIFSVRPVD
EHIVVKEGEQYASAFNDTKIIGEEVNISYTVEKSGNIVTPPLDLTVMYPHLSPRQNNLLY
LTKVTTSPQVKCDAERWINPLNINPKVVHPNPKKETLSVFLLNCGNLYCASFTCSIPEAA
VSQVNVTFRVWKPTFIKGEFTTLYMLVNATLGIRNTDLFQLSSSDRTRSVKIQVSKETLG
GIPIWIIIISILIGLLILALVIFALWKMGFFKRKSRDYSKEDMMD
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggttaagtcatttcactttgacaacagcggcagttgttgtgctgctgacgtgc
gtgttgtccttcaatgtggaccagaaaaatggtttgtcgttcagcggtccagtggaggac
atgtttggttacactatccagcagtttgagaacagcgaggggaaatgggttctgattgga
tcgccgctgtcgggccagccagccaaacggacaggagatgtatacaagtgtcctgttggg
aagggagacaacacgtgtgtcaagctggagctgcctaaaaacacaacagttcccaactta
catgaagtcaaggagaacatgaccatgggaaccacgctggtgaccaatcccaacggagga
tttctggcctgtggtcctcagtatggctacatgtgtgggcagcagcagtacatctcggga
gtttgtgcaaatgtcagcgattccttccagatcctcaactcagtggcaccggccgtgcaa
gagtgtgggcaggagctggacattgtgatggttctggatggatcgaacagcatctacccc
tggtccagtatcatcgatttcctgcgacgtttcattgagaaaattgagatcggacctaaa
ctctcacaggtggggatagtgtcctatggtgagactgtgactcaccgtgtcaacttgagc
cagttcgacaacactcgtgctctgctggatttcgtcgaagagcttcctcagcagacgggc
tttaagaccatgactttcctgggcattgatactgccaggaaggaggccttcatgcccgag
cgtggcgcacgacctggggtgaagaaagtcatggtgattgtgactgacggagagtcacat
gacttccataatctggacaaggtcatcgaagagtgtgatgatgatgacatcgagagattt
ggcattgctgttttgggagactacaatcgtcagaacaaaagttcagaagaagtgcagaag
ttcatcaaggagatcgcatccatctccagtgagccgttacatgaccacttcttcaacgtg
tctgatgaggtggcgttgttgagcattgtggatgctttgggaagcaagatttttgccttg
gaagctacaaccggcaatttcacctcctccttcgagatggagatgtcccaagctgggttt
agcgcacatacttctaaagaaggtgtgttactgggagcagtgggagcatatgactggaat
gggacagtagtaatgcatactgctggaggaacaatcattccagggaagacccagttctac
gacccagagactgaggccgggtacgaaggacttgctgggtacctcggctatgatgttcag
tcagcatccacccctgatggagtgctgtacatcacaggtgcaccgcggtacaaccacaca
ggccgggttgtcatctatcatcttgacataaacaacaacattgtcgtctcacagatactg
aaaggagaacagattggctcctactttggcagcgtgctgcagactgtcgacgtggatgga
gacaccaacacagatctcctcttggttggagctccgatgtacatgggcacggatagagac
gagcaagggcaagtctacgtctacaagctcaaccaggacggccagtttaagcacgagttc
actttaaagcctctcaatcagtcctgctgtactgcccacacagccacctgcactaataaa
aatgaaccatgtggtgcccggtttggtacggccattgcagctgtatcggatctcaacctt
gacgggtttaatgacgtggcgattggtgcgccttttgagaacgaccaccgaggggccgtc
tacatctatcatggagataagacgtcgctgaaggagaagtttgtacagcgtatccctgca
ggtggggatggtgaaaaagtgaaattctttggtcaatctatacatggagccatggatcta
aacggagatggaatcattgatgttgccataggaggtctgggaggggcgtcactattctgg
tccagagatgtcgcagagctccgtgccaacatgacttttgaccccgttaaaatcaacctg
cagcaggctcagtatcagtgtgaacacagcggacgcaaatctgtgtgtgttaaaactgag
gtgtgttttgcctaccgtgtcaaatctgaccagcaggatgtagatgcggatgcagatatc
cgctacagtctgactctggatgctctgcgtgccaaagccagggcctcattcattgactcg
gttgataaaagtgatcgtaagattaccaggatcttcaccatcaaagacagagagagaaaa
tgtgtggaagaaaccttcatgatgtcggcccggctggacttccgtgaccccctcatggtg
tctttggaatttgaaaaagccgatgaggacgaaggccccgtcctggatgaaagccttccc
agatccatcaataagacaattcccttagttgactgtggaagcgatgagaagtgcattgct
gacctctctctcaaagcagagccaagtgtcacacaaatggtgatcaaaacaaacaaagac
aagcttgacgtgaacatcaacatcagaaacagcaaagacaatgcatacaacactaaagtt
gccctcagcttcacaccgaacatcaactatgttaaagtagagccagagatggcatgcacc
ctgaataacacaaaagtggagtgtgctgttggataccccttcttgggaagcaatgtagag
gaagatttcaaagtgaaatttcaagtaaatcccaatcatgtccaggaggttattcagatc
aacgtgacagctacaagtgacagtgaagagctggagtcgaccctgcatgacaacagcgtg
ctaatctccatccctgtgaagtatgaagctggactcatattctcagtgcgccctgtggat
gaacacattgttgtaaaagagggtgaacagtatgccagtgcattcaatgacaccaagata
attggagaggaggtcaacatcagctacacggtggagaagtccggtaatatagtgactcca
ccccttgaccttacagtgatgtatcctcacctgtcgcctcggcagaacaacttactgtac
ctgacaaaagtcaccaccagcccacaggtgaaatgtgatgcagaacgttggatcaaccct
cttaatattaacccgaaagttgtacatcccaatccaaagaaagaaactctcagtgtcttc
ttgctgaactgtggaaacctctactgtgcatcctttacctgctccatccctgaggctgca
gtcagtcaggtcaacgttacattcagagtgtggaaacctacgttcatcaagggtgagttt
accactctgtacatgctggtaaatgccacactggggatcagaaacacagacctgtttcag
ctgagcagcagtgacaggaccagaagcgtgaagatccaggtgtctaaagagacgttagga
ggaatccccatttggatcatcatcatcagcatcctgatagggctgctgatcttagcactt
gtcatcttcgccctctggaagatgggcttcttcaagagaaaatccagggactactcaaag
gaggacatgatggactga
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integrated database retrieval system