Epinephelus lanceolatus (giant grouper): 117269849
Help
Entry
117269849 CDS
T07331
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117269849 (prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ely03041
]
117269849 (prpf4)
Spliceosome [BR:
ely03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117269849 (prpf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WDR55
PRP4
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
NBCH_WD40
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
CAF20
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
117269849
NCBI-ProteinID:
XP_033503093
LinkDB
All DBs
Position
17:366001..385586
Genome browser
AA seq
475 aa
AA seq
DB search
MSDEEDLAPAVKKSRVFYGSLEEKERERLSSETAKGSDAVKAGIEAGNINISSGETLDLE
ERVSERQQEALAAFERRRRARQITVSTDDAEVKAGLRALGEPITLFGEGPADRRERLRSV
LSVVGPDALKKSRRDEERAKRSQDECQQTWYHEGSASLKDARLWLAKYSLPRAMRRLEAA
RCQKDVPEATRAIRQQELHKSLRNLNNFCSQIGDDRPISFCHFSPDSKMLATASWSGLCK
LWSIPDCNLIRTLRGHNTNVGAVVFRPQAGVSLDQSDVSLASCAADGSVKLWNLESDEPV
ADIEGHNERVSRVSWHPSGRFLGTTSYDNSWRLWDLEVQEEILHQEGHSKGVHDLHFHPD
GSLAATGLWLLRYHLATGSGDNTCKVWELRNRKCLYTVPAHQNLLSAVRFQPTDGHFLLT
GAYDNTAKVWSHPGWTPLKTLAGHEGKVMGVDVSPDGKLIATSSYDRTFKLWLSE
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgaggaggacttggctccggccgtcaagaagagtcgtgttttctatggaagc
ctggaagaaaaagagcgcgagcgtctgagctcagagacggccaaaggaagtgatgcagtg
aaggctgggatcgaggcgggaaacatcaacatctcgtcaggagagactctggacctggag
gagcgggtcagcgagcggcagcaggaagcgcttgctgcattcgagcggcggcggcgagca
cgacagatcaccgtctccaccgacgatgccgaggtgaaggccggcctccgagcgctcgga
gagccaatcacgttgtttggagaaggaccagctgaccgccgggagaggctgcgcagtgtt
ctgtctgtcgtcggtcccgacgctctgaaaaagtccaggagagacgaagagagagccaag
agatcacaggacgagtgccagcagacatggtaccacgaaggctctgcctccctgaaggac
gctcgcctctggttggccaaatactctctgccacgggcaatgaggcgtctggaggccgca
cgctgtcaaaaggatgttcccgaggcaaccagggcaatccggcaacaagagctgcacaag
agcctcaggaatctcaacaacttctgcagtcagattggtgatgatcgaccaatcagcttc
tgccacttcagccccgactccaaaatgctggccaccgcctcctggagcggtctgtgtaag
ctgtggtccatccctgactgcaacctgattcgtacactcagaggacacaacaccaatgtg
ggtgcagtcgtattccgcccgcaggccggagtctctctcgaccaatcagatgtcagcttg
gcctcttgcgctgccgatgggtctgtaaagctgtggaacctcgagagtgacgagccggtg
gcagacatcgagggtcacaatgagcgtgtgtcacgtgtatcctggcatccttcaggaagg
ttcctaggaacgaccagttatgataactcgtggcgtctgtgggatctggaggttcaggag
gaaatcctccaccaagaaggtcacagcaaaggagtccacgacctccacttccaccctgac
ggctctctggctgctactggtttgtggcttctcaggtatcacctggcgacaggaagtggt
gataacacctgtaaggtttgggagctgaggaacaggaagtgtctgtacacagtccccgcc
catcagaacctgctgtcggctgtccgattccaacccacggatggtcacttcctgttgact
ggagcgtatgacaacacagccaaggtttggagtcatccgggctggacgccactgaagacg
ctcgccgggcacgaggggaaggtaatgggcgtcgacgtgtcacccgacggaaaactgatc
gcaaccagctcctatgaccgaaccttcaaactctggctgtctgagtga
DBGET
integrated database retrieval system
