Epinephelus lanceolatus (giant grouper): 117269938
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Entry
117269938 CDS
T07331
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117269938 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ely04040
]
117269938 (trpv1)
Ion channels [BR:
ely04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117269938 (trpv1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_4
Ank_3
Ank_5
PKD_channel
FIMP
Motif
Other DBs
NCBI-GeneID:
117269938
NCBI-ProteinID:
XP_033503190
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All DBs
Position
2:21690271..21717272
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AA seq
789 aa
AA seq
DB search
MDKSEMFGFSLESDDRTEEEKARQKEAKKGGLVSALGLGQESPKAPMDTDYQEEMEDPKP
QIRFNLNFDKGIRGVGEPSTKRDSKTFSIDRLFEAAASRDARNLDGLHQYLHQNMKKLSD
SLYQSYGKTALMKALLHLKDGKNETVELLIDISEKMGDVKEFVNAAYTNTYYKGQTALHI
AIERRSISYVKLLVSKGADVHAKACGTFFQPHDGPSFYFGELPLSLAACTNQPDVVDFLM
ENGYQSADAKLTDSQGNTVLHALVVVADNSTHNTEFITNMYDRILKTTARLHPKLKLEDI
ENHKGLTPLKMAAKTGKIGLFSHILQREFQDSNTKHLSRKFTEWVYGPVHSSLYDLASVD
SYEDKSVMEILVYGSDIPNRHKMLQTEPLGQLLEEKWRTFAGRMFFLNFLVYILYLTIFT
LVAYNRKFGKPPFPVENNLMGYLDLSGQLVMVLANCYFFLVGVAEMKRKQPKLQTLLIDG
YYEILFLLQGALFLVTAGLYLFRRQEYIGFLVLCLALSWVNTLYFSRGSRHMGIYSIMIQ
KMILSDILRFIVVYLVFLFGFAAALITLIVKPPKNMTAVTQPPQQGRLFGPLAPDEECVK
PTFENFAFTLLELFKFTIGMGDVEFVQDGENKVVFYMLLIGYIILTYILLLNMLIAVMNR
TVERTTSESASIWKLQRAITILDMERRLSCCLRERYRCGVEKNLGTALGDDRRRCFRVEE
VNWNKWNSNLGKIDEDPGCWDRDHQPTSHRLSNRLYRGRSWRDFSLEGSLWRRQTQQSTE
MTPLSSTHV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtcagaaatgtttggcttctctctggagtcagacgacaggacggaggaggag
aaagcacggcagaaagaggcaaagaagggcggcctggtttctgccctgggattgggtcag
gagtcgcccaaggctcccatggacactgattaccaggaggaaatggaggaccccaagcct
cagattagattcaatcttaattttgacaaagggattcgaggcgtgggggagcccagcacg
aagagagacagcaagacgttcagcatcgacaggttgtttgaagcagcagccagcagggac
gcccgaaacctggatggccttcatcagtacctgcaccagaatatgaagaagctgtctgac
tctctgtatcagtcgtatggtaaaactgccctgatgaaggctctgctgcacctcaaggac
ggcaagaacgagacagtggaactgttaatcgacatttcagagaagatgggagacgttaaa
gagtttgttaatgcagcatacaccaacacctactacaaaggccagaccgctctccatatc
gccattgagaggaggagtatttcctacgtgaagctgctggtcagtaaaggagcagacgtc
cacgccaaagcctgtggaacattcttccagccacacgatggccccagcttctactttggt
gagctgcctctgtctctggcagcctgcaccaaccaacccgacgtggtggacttcctcatg
gagaacgggtaccagtcagcggatgccaagctgaccgactctcagggaaacacggtgctg
cacgccctggtggtggtggctgacaactctacgcacaacaccgagttcattaccaacatg
tatgaccgcatcctcaagaccaccgcccgcctgcaccccaagctgaagctggaggacatt
gagaaccacaaggggctgacgcctctcaagatggctgccaagactggaaagatcgggctt
ttttcacacatcctgcaacgggaattccaagacagcaacaccaaacatttgtcccgtaaa
ttcaccgagtgggtttacgggcccgtccacagctccctgtatgacctggcctccgtggac
tcatatgaggataagtccgtgatggagattctggtgtacggcagtgacatccctaaccgc
cacaagatgctgcagacggagcctctgggccagctgctggaggagaagtggaggacgttt
gcaggccgaatgtttttcctcaacttcttggtctacatcctgtacctgaccatcttcact
cttgtagcctacaataggaaatttggaaagccgccatttcctgtcgaaaacaacttaatg
ggttacctggatctttcaggccagctagtgatggtgctggcaaactgctatttctttctc
gtaggggtcgcagagatgaagaggaaacagccaaagctgcagacgttgctgattgatgga
tattatgagatactttttttgttgcagggcgccctcttcctggtcacagccgggctgtat
ctgttcaggcggcaggagtacattggcttcctggtgctgtgtctcgctctcagctgggtc
aacacactctacttctccaggggcagcagacacatgggcatctacagcatcatgatacag
aagatgatcctcagtgatatcctgcgctttattgttgtctacctcgtcttcctctttgga
tttgcagcagcgttgatcactctgattgtaaagcctccgaaaaacatgactgctgtgact
cagccaccacaacaggggcgtctctttggtccccttgcgcctgacgaggagtgtgtaaaa
cccacctttgaaaacttcgccttcaccctgctggagctcttcaagttcaccatcggcatg
ggcgacgtggaattcgtccaggatggcgagaacaaggtggttttctacatgctcctcatt
ggctacattattcttacgtacatcctgctgctcaacatgctcatcgccgtcatgaaccgc
acggtggagaggaccaccagcgagagcgccagcatctggaagctgcagagggccatcacg
atcctggacatggagaggaggctgtcttgctgtctgagggagaggtatcgctgtggggtg
gagaagaacctcggcactgctcttggagacgaccgtcgccggtgtttcagagtggaggaa
gtcaactggaacaaatggaacagcaacctgggcaaaatcgatgaggatcctgggtgctgg
gatcgagaccaccagcctacctcacacagactatcgaacagactatacagagggaggagc
tggagagacttttcgttggaaggcagcctgtggcggcggcagacacagcagtccacagag
atgactcctctgagcagcacgcatgtctaa
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