Epinephelus lanceolatus (giant grouper): 117270357
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Entry
117270357 CDS
T07331
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ely03021
]
117270357 (taf1b)
Transcription machinery [BR:
ely03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
117270357 (taf1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Motif
Other DBs
NCBI-GeneID:
117270357
NCBI-ProteinID:
XP_033503799
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All DBs
Position
18:10615849..10630772
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AA seq
589 aa
AA seq
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MDEEQTAGYREPCAVCHAVDWGVSDEGRFYCRSCHNVIERTREVVDPNFTPGSNRVSTIS
KGTRTKRPERGRQWVICEGFQFILRNQADALIRLGVSARFKDEVLCQLWRIYLQKSRQAF
THNPLRTSSFRVQRPDSESDSAAEMSIMSASETDGDTNLSSTAGSNAGSSSDWSQYSGSL
DAASYLSARMKRSRHSLMTMKKTLALIHLALTWIREPLTLSDLLRLVNEGHVPYVNAYEE
LPDEMKLEGKDALIFRVESVPSHRAVHKEAQTLILFLQLPACPPITRQSLLHPALLSVRY
LTDANLPDELHPWVCRLMERAGMADQTLYTFDLLSRPVLPRYDVQTAAVIIVTMKLIFGL
DDHTEWDLSNEAADQDDTGDMFNVRRWFRLVQAALIRAQQRRQHDVARKQWTAKKPLYAN
SIKKCVVMKRKRIAEQVQICFEKLSSRPAGVERVDPSSFRFCWGDEDGADGPSLHHKKLD
GVVTLKRNVLVPSNSTYWHPALRACNPRHCMSHYSEVEATLPRTFVWLLQLFCFMLDLKP
AYLYEEVLRVERRVVGSKMPRRRKRRTKTRTETRARSKSRTPLRGRKTR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaacagacggctgggtacagggagccttgtgctgtgtgtcatgcagtggat
tggggagtttctgatgagggacgtttctactgcagatcctgtcacaacgtcatcgagagg
accagagaggtggtcgacccaaacttcactccgggttccaacagggtctccaccatcagc
aaaggaaccagaaccaagaggcccgagcgcgggcgtcagtgggtgatctgtgagggtttc
cagttcatcctgagaaaccaggccgacgctctgatcagactgggagtcagtgcacgtttc
aaggatgaagtcttgtgtcagctgtggagaatctacctgcagaagagtcgacaggcgttc
acacacaacccactgaggacctccagcttcagagtgcaacgtccggactcggagtcagac
agtgcagctgagatgtccatcatgtcggccagtgagacggacggagacacaaacctgtcc
agtaccgccggctccaacgcaggtagctccagtgattggtcgcagtattcaggctcactg
gatgccgccagctacctgtcagcacggatgaagaggagtcgccacagtctgatgaccatg
aagaagactttggctctgatccacctcgctctgacctggatccgggagccactgacgctc
agcgacctgctcaggttggtgaatgagggtcacgtcccatatgtcaacgcctacgaggaa
cttcctgacgagatgaaactcgaaggcaaagacgctctcatcttcagagtagagagtgtc
ccatcccaccgggcggtgcataaggaggctcagactctgattttgttcctgcagcttcct
gcttgtcctccaatcactcgtcagagtctgctgcacccggctctgctcagtgtgcgctac
ctaaccgacgctaatctgcccgacgagctccacccgtgggtctgcaggctgatggagcgc
gccggtatggcggatcagacattatacacgttcgacctcctgtctcgtcccgtcctgccg
cgttacgatgtccagaccgctgccgttatcatcgtcaccatgaagctcatcttcggcctg
gacgaccacactgaatgggatttatccaacgaagcagctgatcaggacgacacaggagac
atgtttaatgttcggaggtggttcagactggtgcaggctgctctgatcagagctcagcag
aggagacaacacgacgtcgccaggaaacagtggacggccaagaaaccgctgtatgccaac
agcatcaagaaatgtgttgtgatgaagaggaagagaatagcagagcaggtgcagatctgc
tttgagaagctgtcctctcgaccagcaggcgttgagcgtgtcgatccgtccagcttcagg
ttctgctggggggacgaggacggagcggatggtcccagtctgcaccacaagaagctggat
ggggttgtgaccctgaaacgcaacgtcctggttccctccaactctacatactggcaccca
gcgctcagagcctgcaatccccggcactgtatgagtcattactcagaggtggaggcaacg
ctacctcggacgttcgtctggttgctgcagctcttctgcttcatgctggacttgaagccg
gcgtacctgtacgaggaggtgctgagggtggagagacgggtcgttggcagcaaaatgccc
aggaggaggaagaggaggacaaagaccaggactgagaccagggctaggtcgaagagcagg
acgccactgagaggaagaaaaacaagatga
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