Epinephelus lanceolatus (giant grouper): 117270591
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Entry
117270591 CDS
T07331
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117270591 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117270591 (trim54)
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117270591 (trim54)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-B_box
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-RING_6
zf-RING_2
TRIM_CC
Sina_RING
DUF5799
CoiA_N
Prok-RING_4
DUF8512
Ima1_N
SMBP
DUF1664
DUF1421
ANCHR-like_BBOX
DUF7830
Motif
Other DBs
NCBI-GeneID:
117270591
NCBI-ProteinID:
XP_033504164
LinkDB
All DBs
Position
13:30078843..30102619
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AA seq
369 aa
AA seq
DB search
MNFALRPPSAGSSGPGAGGGATMENLEKQLICPVCLEMFSKPVVILPCQHNLCRKCANDI
FQSANPLWQSRGSSTMASSGARFRCPSCRQEVLLDRHGVYGLQRNLLVENIIDIYRQQES
SRLMNMKPEQQQQLLCEEHEEEKINIYCLSCETPTCSMCKVFGKHKDCDVAPLSSVYMRQ
KTDLSDSIAILVASNDHVQAVISQMEDICQAVEENGRRQREHLADRFDNLVAILDERKRE
LVGLITKQQDDKLKRVRSLISQHSDHLEAAVTLVESAIQSMEEPHMSLFVQNAQVILEKM
AVTARTSNMERPELGYESMSHFVIDTDDLAAMLKNIDFCSGTHRGVGDDGEEDPEEGVEE
SEVDFFSRY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgctctcaggcctccatcagcaggcagttctgggcctggtgcaggcggagga
gccaccatggagaacctagagaagcagctgatctgcccagtctgcctggagatgttctcc
aaacctgtggtcatcctgccctgccagcacaacctctgccgcaagtgtgccaacgacatc
ttccagtcagctaaccctctgtggcagtcccgcggctcctccaccatggcttccagtggc
gctcgctttcgctgtccttcgtgccgccaggaggtgttgctggaccgccatggggtctac
ggtctgcagaggaacctgctggttgagaacatcatagacatttacaggcagcaggagtcc
tccaggcttatgaacatgaagccagagcagcagcagcagctgttgtgtgaagaacatgaa
gaggagaagatcaatatctactgcctgtcctgtgagacgccaacctgctccatgtgcaaa
gtgtttggaaaacacaaagactgtgatgtcgcaccactcagcagtgtttacatgagacag
aagacagacctgagtgacagcattgcaatcctggttgctagtaacgaccacgtccaggca
gtcatctctcagatggaagatatctgccaggctgtggaggagaacggtcggcgacagaga
gagcatctggccgacagatttgacaacctggttgccatcttggatgagcggaaacgggag
ctggtggggctcattaccaaacaacaggatgacaaactcaaacgtgttcgatctctcatt
agtcagcacagtgatcacctggaggccgcagtgacgctggtggagtcggccattcagtcg
atggaggagccacacatgtctttgtttgtacagaacgcccaagtcatactggaaaaaatg
gcagtgacagcccggacctctaatatggagcgtccagagctcggttatgagagtatgagt
cactttgtcatcgatactgacgacctcgctgccatgctgaagaacattgacttctgctct
ggtacgcacagaggtgtgggagatgatggagaagaagatcccgaagaaggtgtagaagag
tcagaagttgacttcttctccagatattaa
DBGET
integrated database retrieval system
