KEGG   Epinephelus lanceolatus (giant grouper): 117270647
Entry
117270647         CDS       T07331                                 
Name
(RefSeq) syndecan-3-like
  KO
K16338  syndecan 4
Organism
ely  Epinephelus lanceolatus (giant grouper)
Pathway
ely04512  ECM-receptor interaction
ely04514  Cell adhesion molecules
ely04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ely00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117270647
   04514 Cell adhesion molecules
    117270647
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117270647
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ely00535]
    117270647
Proteoglycans [BR:ely00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   117270647
SSDB
Motif
Pfam: Syndecan Protocadherin
Other DBs
NCBI-GeneID: 117270647
NCBI-ProteinID: XP_033504263
LinkDB
Position
18:complement(21152170..21161857)
AA seq 169 aa
MRIPLTASLLLTLGLIHPVHMSLHSPPEDLEGSGYDLEGSGSGSGDWSEQGEAKTIKDQT
CSKDVRISAVKAGGGNKNTLRHSSAQNFDNTLRDSGSFIVFENSKSFMDNKEIFAAVIAG
GVIGVALAVALAALLIYTWQKKDNGGYVLGKQRASHEDYHRSNREGVVV
NT seq 510 nt   +upstreamnt  +downstreamnt
atgaggatacctctgacagcctcgttattattaaccctggggttaatacatcccgtacat
atgtcgcttcattcccctcctgaggacttggagggatcaggatatgacctggagggctct
ggctccggttcaggggactggtcggaacaaggtgaagcaaaaaccataaaggatcaaacc
tgcagcaaagacgtcagaatttctgcagtaaaagcaggaggtggaaacaagaacactctc
cgtcattcttctgcccagaactttgacaacacgctcagagacagcggatcatttattgtt
tttgaaaacagcaagagtttcatggacaacaaagaaatctttgccgctgttattgcagga
ggtgtaataggggtggcacttgctgttgcactggcagcactattaatctacacgtggcag
aagaaagataatggaggatatgttctgggcaagcagagggcttcacacgaagattatcac
agatccaacagggaaggagttgttgtttaa

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