Epinephelus lanceolatus (giant grouper): 117270654
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Entry
117270654 CDS
T07331
Symbol
arid1b
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117270654 (arid1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117270654 (arid1b)
03021 Transcription machinery [BR:
ely03021
]
117270654 (arid1b)
03036 Chromosome and associated proteins [BR:
ely03036
]
117270654 (arid1b)
Transcription factors [BR:
ely03000
]
Eukaryotic type
Helix-turn-helix
ARID
117270654 (arid1b)
Transcription machinery [BR:
ely03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117270654 (arid1b)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117270654 (arid1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
117270654
NCBI-ProteinID:
XP_033504274
LinkDB
All DBs
Position
18:1296353..1341370
Genome browser
AA seq
2281 aa
AA seq
DB search
MNNVDGHPGADPSRAPGSRNTSPAAGGEARTGRGDQTPGSASTVTDMETGMLGGHKVISS
RGGAAAGGVAPPPPPPPPSTSSSSPSSSSSSHHTPPPFSQLIQQLHNHHQLHQQRLRPIN
IPDSSSIQRGQRGQSGGERQHHGGEGNLLLVGNSRAEERHQQHQLNRSEEEEEAEEEEEE
RMDASLGSATNTTTTTNNNNPPPRGTSSEFNHYYGNGRGGPCFDQHGGQQSPGTGVTAAA
LSAHSTMDQVHNSHEGYSNNSPYNHYPNYRPGYGTSGYGGMMSPSRQGNNLMGPGGGSSA
KAAMIATSSPAGGGGGGGGNNGGFQRFPGQGQQQQQQQQHPSGATPTLNQLLTSPSPMMR
GYGSGYPDYNNPSAQQQPSMGPAKDMGSQYGAAAAAAAHGWAGQQRSHPAMSPGSNGQGG
GRSQVPPMDPMAMKRSQLYGMSNNPYSQQQGAPYSGQAYSAPSPHRYPMGMASRGQMGMG
AMQYPQQQMGSQYSQQQQQQQQQQQQQQSVGGYCQPGQPPYFSPPQQQPAAPSQPPYMQP
RPLPQQEVPQEAYGGRGQSAAMTPGKPNHEEMSLSQQERPSSLPDLSGSIDDLPTGTEAA
VSSGASGSSSAQGDQGTPARSPFSPHVSPRLPPPARTGPSPSPSPSPAGSSSQSRSGPMS
PATSGPGPQLTPQVSGPGSDGGPQSAPPQDRGFPPSMQRSTPGPQFGPQQSAPPMSPHPA
PGGTMHHGSYQQGASYGQYGPPGNFPRPPHYGGAPSANYSGPGPGPGLANSLGLNASSPM
HGQGPSTPAGRGPGPGAGGRPYPAGGSAMAPTSPGMPQPAGQGMGPPGPNTSRKLPEVGP
NSGPSANSSSSSTSASVAAAVAQSRPPFARSPAYHNQSWPGGRPALSPTLHPSHPPHPPH
PPHPPHHSQQGTTAQPQPSVQTPPEHYGQGSYLGMAPMGGMGSGGPGGPGGPGGPGGPYS
QQAGSNSGRMTPQGPPYSAPPSGPMMMPADGMGAHPDAKQRLELSKEGVCPATAEPPKPK
CVSQPPTPSPMSPSSASLSSCHGEDSDSISSPAWSKTSTSPKPSVATMTNEKITRLYEMG
SEPERRLWVDRYLTFMDERGTPVPNLPAVGKKPLDLCRLYMAVREIGGLAMVNKNKKWRE
LSSLLNVGTSSSSASSLKKQYIQYLFAYECKVERGEEPPPEALGPTGDTKKPLSLQAKIQ
PPSPANSGSLQGPNTPQSSSSSLTEAPGDLKPPTPASTPHSQMGPHPGNRNMVGVSVQDP
FSEGSDPAFHSKRGPGPGGAPYQQGVGPTDPSMRMQYDAKKDPYGGPRKGPGPGEAFGPG
QMPSGAMQDMYPRGPPSGPLTGMGPRPQYPYGPGYERRPDHVMGPDAAMAPPGGQNSMGP
SGNESSMYPANRYPHQRHGHDGYGQQYPHGMAYTSHQPLYPQQQGYKRAMEGIYPPAKRH
EGEAFTVQQFGSQQPDMFGPYSGGGGGSYMGAERRPVQGQYPYPYARDRQGPPQHGMMGS
GPPAVSGGPGEGPQPNMWHPRTDMGYTYSRQGQGPPYPGMGRGDDQEGRAPQDSQWPPSH
PGQRQPPFPPLSSSSPSMPPLPSRQPPSSFQATPTVPNHVTRSHSPSSFPRPLGGSLSPN
SAPYLPSMKKPGPPPTQGLPIIHREVSFPPSSVEATPPKLKPRRRLTSKDTGTPEAWRVM
MSLKSGLLAESTWALDTINILLYDDSTVGSFSLTQLPGFLELIVEFYRRCLIQIFGILEE
YEVGTEGQRTLLGPLPDTPEEQQEVLKEPAADGPSAEEPRTPRRLIEEMEERMEVLLTAA
PDTEEEVKDSEPVVKEEAEVVKEEHQEQAEPRPLQASKYDKLPIKVEEEGKEWEEVEERW
AELRRPNGFISGLLHWKAGGGDSTAHIQTGERDGRRGGDEGRRQETGGGGDRQEEVEERS
PPAGEETPPESQEGVLSEVRGQRSPAAHSPLSQLEDEPRCWDEAPLSTAESWQDSLAKRC
VCISNIVRGLSFVPGNDADMSRHPGLLLILGRLVLLHHHHPRRKRTPPSYQREEEQGLAC
SRDEWWWDCLAALRENTLVTLANMSGQLDLSQYPESICLPILDGLLHWMVCPSAEAQDPF
SAAGGGSSLTPQRLVLECLCKLSIQDCNVDLLLATPPFSRQQKLYATLMRLVGERKSQVC
REMAVAVLSHLAQGDPTAARSIALQKGSVGTLIGFLEDSVAVAQYQQSSHSMLHAASPPE
PPSVNMMCRAAKALLAMAKVEENRSEFVLYESRLLDISLSAALNTSVAAIMCEVLFKIGR
S
NT seq
6846 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgtagatgggcatcctggagcggatcccagtcgggctccggggagcaggaac
accagccccgctgcaggaggagaagcacggacaggacgcggtgatcaaaccccggggtcc
gcgtccaccgtgaccgacatggagacggggatgctcggcgggcacaaagtgatcagcagc
cgtggcggagccgctgctggtggtgttgcacctcctcctcctcctcctcctccatcaaca
tcatcatcatcaccatcatcatcatcatcatcccaccacacacctccgccgttcagccag
ttaatccagcagctgcacaaccaccaccagctccaccaacagcgactgcgacccatcaac
atcccagacagcagcagcatccagcggggccagaggggacagagcggcggggagcgacag
catcatggaggggaaggaaacctcctcctggtggggaacagccgagcagaggagcgccat
cagcaacaccagctgaacagaagcgaggaggaggaggaggcggaggaagaggaggaggag
cggatggatgccagcctcggatcagccaccaacaccaccaccaccaccaacaacaacaac
cctcctccaagagggaccagctccgagtttaatcattattatgggaatggaagaggaggg
ccttgctttgatcaacatggcggacaacaaagcccagggactggggtaacagcggcggcg
ctctcggcacacagcaccatggaccaggttcacaactcccacgaaggctacagcaacaac
agcccgtataaccactacccgaactatcggcccggctatgggaccagtggatacgggggc
atgatgagtccctcccgccaggggaataacctgatgggcccgggcggcggcagctcggcc
aaagcggctatgatcgcgaccagctccccggctggaggcggcggcggcggcggcggcaac
aacggaggattccagcggttccccggacagggtcagcagcagcagcagcagcagcagcac
ccctccggagctacaccgactctaaaccagttattgacgtctccgagcccgatgatgaga
ggttatggaagtggatatcctgattataataatccttccgcacaacaacagccgagcatg
gggccggctaaagacatgggctcccagtacggcgcggcggcggcggcggcggctcacggc
tgggcaggacaacaaagaagtcacccggctatgagccccgggagcaacgggcagggcggc
ggcaggtctcaggtgccgccaatggacccgatggcgatgaagcgctcgcagctctacggc
atgagcaacaacccgtattcccagcagcagggggcgccatactccggccaggcctacagc
gccccctccccccacagatacccgatggggatggccagcagggggcagatggggatggga
gcgatgcagtacccgcagcagcagatgggttctcagtacagtcagcagcagcagcagcag
cagcagcagcagcagcagcagcagagcgtgggaggttactgtcagccgggtcagccgccg
tacttcagccctccacagcagcagcccgccgccccgagccagccgccgtacatgcagcca
cgcccactgcctcaacaggaggtgcctcaggaggcatacgggggccgaggccagtctgct
gctatgactcctgggaaaccaaaccacgaggagatgagtctgagccaacaggagaggccg
tccagcctgccggatttatccggctccatcgatgacttgcccaccggcaccgaggcggcg
gtgagttcaggggcgtcgggctccagcagcgctcagggcgatcaggggactccagcacgt
tctcctttctccccccacgtctcacctcgactccccccgccggctcgcaccgggccctcg
ccctccccgtcgccgtcccccgctgggtccagcagccaatcacgatccggtccgatgtcc
cctgccaccagtggaccaggccctcagttgacccctcaggtctctggtcctggatcagac
ggcggccctcagtcagccccgcctcaggacagaggtttccctccctccatgcagcgtagc
accccggggcctcagtttggccctcagcagtcagcaccgcccatgtcccctcacccagcg
ccggggggcaccatgcaccacggctcctaccagcagggggcgtcatacggccagtacgga
cctccaggtaacttcccccggcccccccactacggcggggcccccagtgccaactacagc
ggccctggcccgggtcctggtttagccaacagtctggggttaaacgccagcagtcccatg
cacggtcagggcccatccaccccggcaggtcgcggccctgggcctggcgccgggggccgg
ccttaccccgctggagggagtgccatggctcccacctcccctggcatgccacagcccgcc
gggcagggcatggggcccccggggcccaacaccagccgcaaactgcctgaggtcggccca
aattctgggccgagtgccaactcctcgtcatcctcgacctccgccagcgtcgccgctgct
gtcgcccagagcaggcctccctttgctcgttccccagcctaccacaaccagtcctggccc
ggcggtcgacctgccctctctcccacccttcatccctctcatcctcctcaccctcctcac
cctcctcaccctcctcaccactcccagcaggggaccactgctcagcctcagccctccgtg
cagaccccccctgagcattatgggcagggaagctacctgggcatggcaccgatgggaggg
atgggctctggaggccctggaggccctggaggccctggaggtcctggaggtccctacagc
cagcaggcaggcagcaactctggtaggatgacgccgcagggaccgccctacagcgccccg
ccctcagggcccatgatgatgccagcagacgggatgggagctcatccagacgccaagcag
cggctagagctcagcaaagagggcgtctgtcccgccaccgccgaacccccgaaacccaag
tgtgtgtcccagccccccaccccgtcccccatgtcccccagctcagctagtctgtcctcc
tgtcacggggaggacagtgatagcattagcagccccgcctggtccaagacatcaaccagc
cccaagcccagcgtggccaccatgaccaacgagaagatcacccggctgtacgagatgggc
tctgagccggagaggaggctgtgggtggaccgctacctgaccttcatggacgagaggggg
acgcccgtcccaaacctgcccgccgtcgggaagaaacctctggacctctgcagactgtac
atggcggtcagagagatcggaggactggccatggtgaacaagaacaagaagtggagggag
ttgtcgtccctgttgaacgtggggacgtccagcagctcggccagctctctgaagaagcag
tacatccagtacctgtttgcctacgagtgtaaggtggagcgtggggaggagcctccacct
gaggccctgggccccactggagacaccaagaaacctctgtccctccaggccaagatccag
cccccgtccccagcgaactcgggctccctgcagggccccaacacccctcagtccagcagc
agctccctgaccgaggcccctggagacctgaagcccccgaccccagcctccaccccgcac
agccagatgggcccccaccctggaaacaggaacatggtcggggtgagcgtccaggacccg
ttctctgaaggcagcgatccagccttccacagcaagcgaggccccggccccggcggcgcc
ccctaccagcagggcgtaggtcctacagacccctcgatgaggatgcagtacgatgccaaa
aaagacccgtacggaggaccgaggaaaggtccggggcccggcgaggcctttggtcccggt
cagatgcccagcggtgccatgcaggacatgtacccccgtgggccgccctctgggcccctg
acagggatgggccccaggccccagtacccctacggccctggctacgagcggaggccggat
cacgtgatgggaccagatgcagccatggcgccacctggaggtcagaacagcatgggtcca
tctggaaacgagtcgagcatgtaccccgccaacagatacccccaccagagacacggacac
gacggttacgggcagcagtatcctcacggcatggcctacacttcccatcagcccctgtac
cctcagcagcagggttacaagcgtgcgatggaggggatttaccccccggcgaagcgtcat
gaaggcgaggcgttcacggtgcagcagtttggctcccagcagcccgacatgttcggcccc
tacagtggaggaggcggtgggagctacatgggcgccgagcggcggccagtgcagggccag
tacccgtacccgtacgcccgggaccggcagggccccccacagcacggcatgatgggctca
ggaccaccagcggtgtccgggggccccggggaggggccgcagcccaacatgtggcacccc
aggacagacatgggctacacgtacagccggcagggccaggggcccccctaccccggcatg
ggccgaggagacgaccaggagggccgggccccccaggacagccagtggccccccagtcat
ccaggacaacgccagcccccattccccccactctcctcctcctccccctccatgcccccc
ctgccctccagacagcccccctcttccttccaggccacgcccaccgtccctaaccacgtg
acccgctctcacagcccctcctccttcccccggcccctggggggctccctgtcccccaac
agcgctccctacctgccctccatgaagaagccggggcccccacccacacagggcctcccc
atcatccacagagaggtcagcttcccccccagctctgtggaggccacaccccctaaactg
aagccacgacgccggctcacctccaaggacacaggaaccccagaggcgtggcgggtgatg
atgtcactgaagtcgggcctgttggcagagagcacctgggctctggacaccatcaatatc
ctgctgtatgacgacagcacggtgggctccttcagcctcacacagctgcctggtttcctg
gagctcatcgtggagttttaccgccgctgcctcatccagatcttcgggatcctggaggag
tacgaggtgggaactgagggccagaggaccctgctgggacccctgcccgacacccctgag
gagcagcaggaggtgctgaaggagccagcagctgacggcccgtcagccgaggagccgagg
acaccgaggaggctgatcgaggagatggaggagaggatggaggtgctgctcacagctgct
cctgacacagaggaggaggtgaaagacagcgaacctgtcgtcaaagaggaggcggaggtg
gtgaaggaggagcaccaggagcaggcagagccccgccccctgcaggccagcaagtacgac
aagctgccaatcaaggtggaggaggagggcaaggagtgggaggaggtggaggagcgctgg
gccgagctccgccgacccaacggcttcatcagcggccttctgcactggaaggccggagga
ggagactccaccgctcacattcagacaggagagagggacgggaggaggggaggagacgag
gggaggagacaggagacagggggaggaggtgacaggcaggaggaggtggaggagaggagc
ccaccagccggtgaggagacgccacctgaaagccaagaaggcgtcctgtcggaggtcaga
ggtcagaggtcgccggcggcccatagtcccctcagtcagctggaggacgagcctcgctgc
tgggacgaggctcctctgtccaccgccgagtcgtggcaggactctttggctaaacgctgt
gtctgcatctccaacatcgtgcgcggcctctccttcgtccccggcaacgacgccgacatg
tcgcggcacccgggcctgttgctgatcctgggccggctggtgctgctgcaccaccaccac
cctcgcaggaaacggacgccgcccagctaccagcgggaggaggagcaagggctggcctgc
agccgggacgagtggtggtgggactgcctggcggcactcagggagaacacgctggtgacg
ctggccaacatgtcgggccagctggacctgtcgcagtaccccgagagcatctgcctgccc
atcctggatgggctgctgcactggatggtgtgcccgtccgccgaggcccaggacccgttc
tccgcagcgggcggcggctcctcgctcacgcctcagagactggtgctggagtgtctgtgc
aagctgagcatccaggactgcaacgtggacctgctgctcgccacgccgcccttcagccgc
cagcagaagctctacgccacgctgatgcgcctggtgggcgagaggaagagccaggtgtgt
cgggagatggcggtggccgtgctgtcccacctggcgcagggcgacccgacggcggcgcgc
tccatcgccctgcagaagggcagcgtgggaactcttatcggcttcctggaggacagtgtg
gcggtggctcagtaccagcagagctcgcacagcatgctgcacgccgcctcgccgccggag
ccgcccagcgtcaatatgatgtgccgtgccgccaaagcactgctggccatggcgaaggtg
gaggagaaccggtcggagtttgttctgtacgagagccggctgctggacatctcgctgtcg
gccgccctcaacacctcggtggcggccatcatgtgtgaagtactgtttaaaatcggccgc
tcgtga
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integrated database retrieval system
