Epinephelus lanceolatus (giant grouper): 117270713
Help
Entry
117270713 CDS
T07331
Symbol
afdna
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04517
IgSF CAM signaling
ely04520
Adherens junction
ely04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117270713 (afdna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117270713 (afdna)
04530 Tight junction
117270713 (afdna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
RA_3
PDZ_2
Yop-YscD_cpl
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
117270713
NCBI-ProteinID:
XP_033504361
LinkDB
All DBs
Position
18:29603590..29737256
Genome browser
AA seq
1965 aa
AA seq
DB search
MSGSREEERRKLADIINHWNANRLDLFEISRPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERQLDLDEKPLVVQLNWNKD
DREGRFVLKNENDILPKKSQSNGPEKEKDGVIQNFKRTLSKKEKKKEKKREKEFARIPDG
DEQALSREDGENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFMSSDGR
PDSGGTLRIYADSLKPNIPYKTILLSTRDTADFAVVEALEKYGLEKENPREYCIARQDDK
SGKEVILDDTECPLQIFRDWPADRGALVFQLKKRPPDYQGRKARKDDKGLRGKEGSSSSL
PPEKLPYLVELSPGRGNHYAYYAYRHHEDGSDSRDKPKLYRLQHSITEVGSDCTEDGAIQ
LLGPGILPHHCNLMHSEGMVTVTPHGPDADTFVDGQRVTETTVLRSGSTLQFGSAHVFKF
VDPMFDQGGKREPAAMMRSRHKSGSVPETTFDLHGDVHSGAALPTSKSSGKLDMERGMVK
PMIRGEQQDSRSQDISADRTELTLPAGIEFRDNSEDTFLSAIINYTNSSTVHFKLSPTYV
LYMACRYVLSPSYRPDMSPSERTHKVIAIVNKMVSMMEGVIQEIPEGDQKQKNIAGALAF
WMANASELLNFIKQDRDLSRITLDAQDILAHLVQMAFKYLVHCLQADLNNYMPAFLDDPE
EHNPQRPKIEDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKLVTDTESGL
CCHYWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSMQDVQNIHNTC
FKLNSLQLHALMTNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGREVQLEEDPDLQ
LPFLLPEDGYSCDVVRSLPNGLQDFLEPLLQRGFCRLVPHPRSPGTWTVHFEGADCDSHF
SAADSSEMPMRKDPEVVTVTLKKHNGMGLSIVAAKGAGQEKLGIYIKSVVKGGAADVDGR
LAAGDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMP
RASDRGRDKNGKLRPKSEGFELYNSSVQNGSPESPQAGWDSYPEPKKMSSEDRLLKNRAD
HRSSPNVANQGQSPAGKAVYPGGPGTKITSVSTGNLCADDEPSPPRPEAYPIPTQTYPRE
YFTIPASKSQDRVVGPGQVPTQHWQGMEDRERLPVVDNIHNNSMQRINHSQEELYPPPGV
LRPDERMQQHYQQEYQHRDLDYQHRDMDYQRGPPGGVVGPDHWAPQPQVSSSLESSTSSQ
EHLNFSASSSSSNKTQNQKTGPGRWKTPNAPHAAPPHSAQTPSRSDLPPPPPPPPAPYPD
AYDPYDPQPELPLPPPPTAVAPVTAQQAADRKKREEQQRWYEKEKARLEEERERKRREQE
RKLGQIRANPVMPVQPHNNGGSMPPPHHQPPLPSVAPPQPYLPPQPQPQPPPSRPEKLAS
LPRSAVPPPASASHPAGMDTVIRELLPQQQPRTIERRDLQYITISKEELTSSDSLSPDPW
KRDAREKAEKQQQLHIVDLLDKEIQELQAKPERTAEESDRLRKLMLEWQFQKRLQESKHS
DEDEEEEDDEDVDTMLIMQRLEAEKRARQQNAVPAISVLDLLQDEERRRKQQLEEIRKRE
AEERAKQEEERRWREEAKREAEEKRRQEEEYYNRLEAERRRQHEEAERKLLTPDEPAGLY
RPPLPRDYQPPAPHNPTNTPPPPPQRNTSYLKTQVASPDTLYTAKFVSYAGDEEDEEEAT
KAGSGGGGNQSGQVKLSATRKSYGDLPASASPNHSRPQPPPTARKPRPLSDGIFLSGSFQ
PPVNNSNSTGPPLPAKPSSIPPGGFKGFNTYTGNSAGVVGSGEVYNDPRDKWTKSQEQEN
SIPSGAPESLTFKERQRLFSQGKEVSNKVKASRKLMELENELNTK
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggagcagggaggaggagaggaggaaactggccgacatcatcaaccactggaac
gccaaccggctcgacctgttcgagatcagccggcccacagaggacttagagttccatggc
gtgatgcggttctacttccaggaccgggttgccggtaactttgccaccaagtgcatcaga
gtgtccagcacagcgacaacacaggatgtcatagaaacgttagctgagaagttcagacca
gacatgaggatgctctcctcgccaaagtactccctgtatgaagtccatgtcagtggcgaa
gagcgtcagctagacctggacgagaagcctctggttgttcagctgaactggaacaaagac
gacagagaaggacgcttcgtcctgaagaacgagaacgacatccttcccaagaagagtcag
agtaatggtccagagaaggagaaggatggagtgatccagaacttcaagaggactttgtcc
aagaaggagaagaagaaggaaaagaagagggagaaggagttcgcgcggatccccgacgga
gacgagcaggcactcagtcgggaggacggagaaaacagtcgtctggcagcagaggtttat
aaggacatgccggagaccagctttactaggacaatctccaacccagaggtggtgatgaag
aggagacgtcagcagaagctagagaaacgcatgcaggagttcatgagcagtgatgggagg
cccgactcaggaggcactttgcggatatacgctgacagtctgaagcccaacatcccgtat
aaaaccatcctgctctctacaagagacacggctgactttgctgtggtagaggcgctggag
aagtacgggctggagaaggagaaccccagagagtactgcattgcccggcaagatgataag
tcaggcaaggaagtgattctggacgatactgagtgtccactgcagatcttcagggactgg
cctgctgacagaggagcactagtgttccagctgaagaagagacccccggactaccagggg
aggaaggcaagaaaagacgataaaggcctgcgagggaaggagggcagcagcagctccctg
ccgcccgaaaaactgccttacctggtggagttgagcccagggcgagggaatcactatgcc
tactacgcctatcggcatcatgaagacgggtctgactcacgggacaaaccaaagctgtac
cggcttcagcacagcatcacagaggtcggctcagactgcacagaggatggagccatacag
ctgctcggtccagggatcctgccccaccactgcaacctcatgcacagtgaaggcatggtg
accgtgacgccacacggtccagacgccgacacctttgttgacgggcaacgagtcaccgag
acgacggtgctgcgttcaggctccaccctccagtttggctctgcacacgtctttaaattt
gtggacccgatgttcgaccagggagggaagagggagccggctgcaatgatgaggagccga
cacaagtcaggcagtgtgccagaaaccaccttcgaccttcacggagacgtccacagtgga
gctgcgctgcccaccagcaagagctcagggaagctggacatggagagaggcatggtgaaa
cccatgatcagaggagagcagcaggacagcaggtctcaggacatttcagcagacagaaca
gagttgactctgccagccggaatcgagttcagagacaactctgaggacaccttcctgtca
gccatcatcaactacaccaacagctccacggtccacttcaaactctcacccacttacgtc
ctgtacatggcctgccgctacgtcctgtcgccctcttaccggcctgacatgtcgccgtct
gagaggacacataaggtcatcgccatcgtcaacaagatggtgagcatgatggagggagtc
atccaggagattcctgaaggggatcagaagcagaagaacatcgcaggagcactggctttc
tggatggccaacgcttcggagctgctcaacttcatcaagcaggacagagacctgagtcgc
atcacgctggacgcccaggacatcctcgcccatctggtccagatggctttcaagtacctg
gtccactgtctccaggcggatctgaacaactacatgcctgcttttctggacgacccagag
gaacataatccacagagacccaagatcgaggatgtcctgcacaccctaacaggggcgatg
tcgttgctgcggcggtgtcgagtcaacgccgccctgaccatccagctcttctcacagctc
ttccacttcatcaacatgtggctcttcaacaaactggtgacggacacagagtcagggctg
tgctgtcactattggggggccatcctccgacagcagctcagccacatcgaggcctgggca
gagaaacagggtctggagctcgccgcagactgccacctcagtcgaattgtacaggccacc
accctgctcaccatggacaagtactccatgcaagatgtgcagaacatccacaacacctgc
tttaagctcaactccctgcagctccacgctctcatgaccaactaccattgcgctccggac
gagccttacatcccgcctgagctaatagaccacgtggtggcagtggccgaaaacacagca
gatgagctggcgaggagtgatgggagagaggtgcagctggaggaggatccggacctccag
ctgcccttcctccttcctgaggatggttattcctgcgatgtggtgcgaagcctccccaac
ggcctgcaggacttccttgagccgctgctgcagagaggtttttgtaggttggtaccacat
ccccgttcacctggcacctggacagtccactttgaaggagctgactgcgacagccacttc
tctgctgctgacagttcagagatgccaatgaggaaagacccggaggttgtcacggtaacc
ctgaagaagcacaacggcatgggcctcagcatcgtggctgccaagggtgctggtcaggag
aagctgggcatctacatcaagtctgttgtcaaaggaggagcagctgacgtggacggccgt
ctggctgcaggtgaccagttgttgagcgtggacgggcgtagtctggtgggcctatcacaa
gagagggcagcagagctaatgacgaggacgggctcagttgtgactctggaggtcgccaag
cagggagccatttaccacggactggctactctcctcaaccagcccagccccatgatgcca
agagcatcagatcgaggccgtgacaaaaacgggaaactgcgaccaaagagtgaaggcttc
gagttgtacaacagctcggtgcagaacggctctccggagagtccgcaggccggctgggat
tcttaccccgaaccaaagaagatgagcagtgaagatcgactcttgaagaatcgagctgat
caccgctccagccctaacgtagccaatcagggccagagtcctgcaggcaaagcggtgtac
cccggaggacctggcactaagatcacctccgtctccaccggcaacctgtgtgcagacgac
gagccctcccctccccgtccagaagcctatcccatccccacccagacctaccccagggag
tacttcaccatcccggcctcgaagagtcaggatcgggttgttggtcctgggcaggttccc
acacagcattggcagggcatggaggacagagaacgcctcccagtggttgacaacatccac
aacaacagcatgcagcggattaaccactcgcaggaggagttgtatcctccaccaggagtt
ctgaggccagatgagcgcatgcagcagcactaccagcaggaataccagcaccgagacctg
gactaccaacacagagatatggactaccagagaggtccaccaggaggtgtagttggtcca
gaccactgggccccacagccgcaggtgtcctcctcgttggagtcatccacatccagccag
gagcacctcaacttctccgcctcctcctcctcctccaacaagacccagaaccagaagacg
gggccgggccgatggaagacacccaacgcccctcacgctgcgccgccacattcagcccag
acaccatcccgctctgacctgccccctcctccacccccacccccggccccttaccctgac
gcctacgacccctacgacccacaacctgagctaccgctcccgccacctcccactgctgtt
gctccggtaacagcccagcaggctgcagaccgcaagaaacgtgaggagcagcagcgctgg
tatgagaaggagaaagctcggctggaggaagaaagggagaggaagaggagagagcaggag
aggaagctgggtcagatccgggccaaccccgtcatgcccgtccaacctcacaacaacgga
ggatccatgcctcctcctcaccaccagccccctctgccctccgttgccccgccccagccc
tacctcccgccacagcctcagccccagccccccccatccagaccagagaagctggccagc
ctgccgcggtcagctgttcctccgcctgccagtgcctcccaccctgctggcatggacacg
gtgatcagggagctgttaccgcagcagcagccacggaccatcgagaggcgagacctgcag
tacatcaccatcagtaaggaggaactgacgtccagcgacagcctgtctccagacccctgg
aagcgagacgcccgcgagaaggctgagaaacagcagcagcttcacatcgtcgacctgctg
gacaaagagatccaggagctccaggcgaagccagagcgaacggcagaggaaagtgaccgt
cttaggaagctgatgctggagtggcagttccagaaacgactgcaggagtccaagcatagc
gacgaggacgaggaggaggaggatgatgaggacgtggacacaatgctgatcatgcagagg
ctggaggccgagaagagagccaggcagcagaatgctgtcccagctatctctgttctagac
ttgttgcaggacgaggagcgacggcgtaagcagcagctggaggaaattcgtaagcgggag
gcggaggagcgagcaaagcaggaggaggagaggaggtggagggaggaggccaaacgagag
gccgaggagaagaggagacaggaggaggagtactacaatcgcctggaggccgagcggcgc
cggcagcacgaggaggccgagagaaagctgctgacgcctgacgagccggccggtctgtat
cggcccccgctgccccgggattaccaaccccccgccccccacaaccctactaacaccccc
ccgccccccccacagagaaacacctcctacctcaaaacccaggtcgcctcccctgacacg
ctctacaccgccaagtttgtctcctacgcgggcgatgaggaggacgaggaggaagccacc
aaagcagggagtggcggcggcggcaatcagtcaggtcaggtgaagctgtcggcgaccagg
aagtcgtacggcgacctcccggcctccgcctcacccaatcacagcaggcctcagccgccg
cccactgcgcgcaagccccgccctctttctgacggcatcttcctgtctggctcgttccag
ccgccagtcaacaactccaacagtacaggtcccccccttcctgccaaacccagctccatc
cccccaggaggctttaaaggatttaacacgtacactggaaactcagcaggagttgtagga
tcaggagaagtctacaacgacccgcgggacaaatggacgaagagtcaggagcaggagaac
tcgatccccagcggcgctccggagagtctgaccttcaaggagcgtcagcgtctcttctct
caggggaaggaggtttccaacaaggtcaaggcttcacgcaaactcatggagctggagaac
gagctcaacaccaagtag
DBGET
integrated database retrieval system